RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 A0A1W2PPE2 198 aa5.83□□□□□ -1.48
YBX3-209ENST00000540747 A0A1W2PPH5 198 aa5.83□□□□□ -1.48
YBX3-209ENST00000540747 A0A1W2PR64 198 aa5.83□□□□□ -1.48
YBX3-209ENST00000540747 A0A1W2PRV1 198 aa5.83□□□□□ -1.48
YBX3-209ENST00000540747 ACOD1A6NK06 481 aa5.83□□□□□ -1.48
YBX3-209ENST00000540747 FAM183AA6NL82 134 aa5.83□□□□□ -1.48
YBX3-209ENST00000540747 RIIAD1A6NNX1 92 aa5.83□□□□□ -1.48
YBX3-209ENST00000540747 PRR32B1ATL7 298 aa5.83□□□□□ -1.48
YBX3-209ENST00000540747 J3QT63 122 aa5.83□□□□□ -1.48
YBX3-209ENST00000540747 K7N7A8 449 aa5.83□□□□□ -1.48
YBX3-209ENST00000540747 TNFRSF11BO00300 401 aa5.83□□□□□ -1.48
YBX3-209ENST00000540747 SLC1A7O00341 560 aa5.83□□□□□ -1.48
YBX3-209ENST00000540747 RGS10O43665 173 aa5.83□□□□□ -1.48
YBX3-209ENST00000540747 SELENOFO60613 162 aa5.83□□□□□ -1.48
YBX3-209ENST00000540747 MITFO75030 526 aaPredicted RBP5.83□□□□□ -1.48
YBX3-209ENST00000540747 SOX14O95416 240 aa5.83□□□□□ -1.48
YBX3-209ENST00000540747 IFNGP01579 166 aa5.83□□□□□ -1.48
YBX3-209ENST00000540747 TK1P04183 234 aa5.83□□□□□ -1.48
YBX3-209ENST00000540747 AMY1AP04745 511 aa5.83□□□□□ -1.48
YBX3-209ENST00000540747 AMY2AP04746 511 aa5.83□□□□□ -1.48
YBX3-209ENST00000540747 ARG1P05089 322 aa5.83□□□□□ -1.48
YBX3-209ENST00000540747 H2BFMP0C1H6 154 aa5.83□□□□□ -1.48
YBX3-209ENST00000540747 ZNF728P0DKX0 622 aa5.83□□□□□ -1.48
YBX3-209ENST00000540747 IGHV1-8P0DP01 117 aa5.83□□□□□ -1.48
YBX3-209ENST00000540747 AZGP1P25311 298 aaKnown RBP5.83□□□□□ -1.48
YBX3-209ENST00000540747 DAPP51397 102 aa5.83□□□□□ -1.48
YBX3-209ENST00000540747 CAPZA1P52907 286 aa5.83□□□□□ -1.48
YBX3-209ENST00000540747 CXCR4P61073 352 aa5.83□□□□□ -1.48
YBX3-209ENST00000540747 SSX2Q16385 188 aa5.83□□□□□ -1.48
YBX3-209ENST00000540747 ZNF829Q3KNS6 432 aaPredicted RBP5.83□□□□□ -1.48
YBX3-209ENST00000540747 DMRTC1Q5HYR2 192 aa5.83□□□□□ -1.48
YBX3-209ENST00000540747 CEP78Q5JTW2 689 aa5.83□□□□□ -1.48
YBX3-209ENST00000540747 MINOS1Q5TGZ0 78 aa5.83□□□□□ -1.48
YBX3-209ENST00000540747 HAGHLQ6PII5 290 aaPredicted RBP5.83□□□□□ -1.48
YBX3-209ENST00000540747 C10orf99Q6UWK7 81 aa5.83□□□□□ -1.48
YBX3-209ENST00000540747 Q6ZSR3 168 aa5.83□□□□□ -1.48
YBX3-209ENST00000540747 AQP11Q8NBQ7 271 aa5.83□□□□□ -1.48
YBX3-209ENST00000540747 OR4M1Q8NGD0 313 aa5.83□□□□□ -1.48
YBX3-209ENST00000540747 OR2T27Q8NH04 317 aa5.83□□□□□ -1.48
YBX3-209ENST00000540747 GIPC3Q8TF64 312 aa5.83□□□□□ -1.48
YBX3-209ENST00000540747 MYDGFQ969H8 173 aa5.83□□□□□ -1.48
YBX3-209ENST00000540747 MUL1Q969V5 352 aa5.83□□□□□ -1.48
YBX3-209ENST00000540747 BCL7BQ9BQE9 202 aa5.83□□□□□ -1.48
YBX3-209ENST00000540747 NAA50Q9GZZ1 169 aaKnown RBP5.83□□□□□ -1.48
YBX3-209ENST00000540747 NIPAL2Q9H841 368 aa5.83□□□□□ -1.48
YBX3-209ENST00000540747 TSSC4Q9Y5U2 329 aaPredicted RBP5.83□□□□□ -1.48
YBX3-209ENST00000540747 MINOS1-NBL1R4GNA1 71 aa5.83□□□□□ -1.48
YBX3-209ENST00000540747 CSMD3Q7Z407 3707 aa5.83□□□□□ -1.48
YBX3-209ENST00000540747 PQLC2LA1A4F0 135 aa5.82□□□□□ -1.48
YBX3-209ENST00000540747 F2RL2O00254 374 aa5.82□□□□□ -1.48
YBX3-209ENST00000540747 CCNB2O95067 398 aa5.82□□□□□ -1.48
YBX3-209ENST00000540747 PF4V1P10720 104 aa5.82□□□□□ -1.48
YBX3-209ENST00000540747 ANXA8P13928 327 aa5.82□□□□□ -1.48
YBX3-209ENST00000540747 ZNF3P17036 446 aa5.82□□□□□ -1.48
YBX3-209ENST00000540747 ALOX5APP20292 161 aa5.82□□□□□ -1.48
YBX3-209ENST00000540747 SLC2A5P22732 501 aa5.82□□□□□ -1.48
YBX3-209ENST00000540747 HOXD3P31249 432 aaPredicted RBP5.82□□□□□ -1.48
YBX3-209ENST00000540747 MAP2K3P46734 347 aa5.82□□□□□ -1.48
YBX3-209ENST00000540747 SERPINB10P48595 397 aa5.82□□□□□ -1.48
YBX3-209ENST00000540747 CD69Q07108 199 aa5.82□□□□□ -1.48
YBX3-209ENST00000540747 ZNF846Q147U1 533 aa5.82□□□□□ -1.48
YBX3-209ENST00000540747 NKAPLQ5M9Q1 402 aa5.82□□□□□ -1.48
YBX3-209ENST00000540747 LCN1P1Q5VSP4 162 aa5.82□□□□□ -1.48
YBX3-209ENST00000540747 KDM4DQ6B0I6 523 aa5.82□□□□□ -1.48
YBX3-209ENST00000540747 XAF1Q6GPH4 301 aa5.82□□□□□ -1.48
YBX3-209ENST00000540747 Q6ZNX1 250 aa5.82□□□□□ -1.48
YBX3-209ENST00000540747 C16orf82Q7Z2V1 217 aa5.82□□□□□ -1.48
YBX3-209ENST00000540747 ANKRD13BQ86YJ7 626 aa5.82□□□□□ -1.48
YBX3-209ENST00000540747 MRPL41Q8IXM3 137 aaKnown RBP5.82□□□□□ -1.48
YBX3-209ENST00000540747 IQCF1Q8N6M8 205 aa5.82□□□□□ -1.48
YBX3-209ENST00000540747 OR4P4Q8NGL7 312 aa5.82□□□□□ -1.48
YBX3-209ENST00000540747 OR13D1Q8NGV5 346 aa5.82□□□□□ -1.48
YBX3-209ENST00000540747 CNIH3Q8TBE1 160 aa5.82□□□□□ -1.48
YBX3-209ENST00000540747 FBLIM1Q8WUP2 373 aa5.82□□□□□ -1.48
YBX3-209ENST00000540747 TRUB1Q8WWH5 349 aaKnown RBP5.82□□□□□ -1.48
YBX3-209ENST00000540747 HIST1H2AAQ96QV6 131 aa5.82□□□□□ -1.48
YBX3-209ENST00000540747 TEAD3Q99594 435 aa5.82□□□□□ -1.48
YBX3-209ENST00000540747 FUNDC2Q9BWH2 189 aa5.82□□□□□ -1.48
YBX3-209ENST00000540747 ZNF556Q9HAH1 456 aa5.82□□□□□ -1.48
YBX3-209ENST00000540747 LIN7BQ9HAP6 207 aa5.82□□□□□ -1.48
YBX3-209ENST00000540747 ABCB10Q9NRK6 738 aa5.82□□□□□ -1.48
YBX3-209ENST00000540747 PLECQ15149 4684 aaKnown RBP5.82□□□□□ -1.48
YBX3-209ENST00000540747 IGHV2-26A0A0B4J1V2 119 aa5.81□□□□□ -1.48
YBX3-209ENST00000540747 TCRBV4S1A1TA0A5B7 111 aa5.81□□□□□ -1.48
YBX3-209ENST00000540747 TMEM82A0PJX8 343 aa5.81□□□□□ -1.48
YBX3-209ENST00000540747 E9PQ18 207 aa5.81□□□□□ -1.48
YBX3-209ENST00000540747 F8VVB4 439 aa5.81□□□□□ -1.48
YBX3-209ENST00000540747 F8VWA3 439 aa5.81□□□□□ -1.48
YBX3-209ENST00000540747 PRODHO43272 600 aa5.81□□□□□ -1.48
YBX3-209ENST00000540747 SRSF10O75494 262 aaKnown RBP5.81□□□□□ -1.48
YBX3-209ENST00000540747 INMTO95050 263 aa5.81□□□□□ -1.48
YBX3-209ENST00000540747 PF4P02776 101 aa5.81□□□□□ -1.48
YBX3-209ENST00000540747 PIPP12273 146 aaPredicted RBP5.81□□□□□ -1.48
YBX3-209ENST00000540747 ZNF182P17025 639 aaPredicted RBP5.81□□□□□ -1.48
YBX3-209ENST00000540747 PSMB9P28065 219 aa5.81□□□□□ -1.48
YBX3-209ENST00000540747 MAP2K4P45985 399 aa5.81□□□□□ -1.48
YBX3-209ENST00000540747 ROM1Q03395 351 aa5.81□□□□□ -1.48
YBX3-209ENST00000540747 MEF2CQ06413 473 aaPredicted RBP5.81□□□□□ -1.48
YBX3-209ENST00000540747 RIPPLY1Q0D2K3 151 aa5.81□□□□□ -1.48
YBX3-209ENST00000540747 MICAQ29983 383 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms