RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 DLGAP1O14490 977 aa9.19□□□□□ -0.94
CLSTN3-209ENST00000539982 MMP23AO75900 390 aa9.19□□□□□ -0.94
CLSTN3-209ENST00000539982 SOX14O95416 240 aa9.19□□□□□ -0.94
CLSTN3-209ENST00000539982 IGLV3-1P01715 115 aa9.19□□□□□ -0.94
CLSTN3-209ENST00000539982 RAP2AP10114 183 aa9.19□□□□□ -0.94
CLSTN3-209ENST00000539982 FCGR1AP12314 374 aa9.19□□□□□ -0.94
CLSTN3-209ENST00000539982 ALOX5APP20292 161 aa9.19□□□□□ -0.94
CLSTN3-209ENST00000539982 ECI1P42126 302 aa9.19□□□□□ -0.94
CLSTN3-209ENST00000539982 OR3A4PP47883 348 aa9.19□□□□□ -0.94
CLSTN3-209ENST00000539982 IL24Q13007 206 aa9.19□□□□□ -0.94
CLSTN3-209ENST00000539982 EDDM3AQ14507 147 aa9.19□□□□□ -0.94
CLSTN3-209ENST00000539982 CLVS2Q5SYC1 327 aa9.19□□□□□ -0.94
CLSTN3-209ENST00000539982 TMEM42Q69YG0 159 aa9.19□□□□□ -0.94
CLSTN3-209ENST00000539982 OR52W1Q6IF63 320 aa9.19□□□□□ -0.94
CLSTN3-209ENST00000539982 DEGS2Q6QHC5 323 aa9.19□□□□□ -0.94
CLSTN3-209ENST00000539982 ANGPTL5Q86XS5 388 aa9.19□□□□□ -0.94
CLSTN3-209ENST00000539982 ZNF695Q8IW36 515 aa9.19□□□□□ -0.94
CLSTN3-209ENST00000539982 PQLC1Q8N2U9 271 aa9.19□□□□□ -0.94
CLSTN3-209ENST00000539982 KLHL30-AS1Q8NEE0 82 aa9.19□□□□□ -0.94
CLSTN3-209ENST00000539982 ZNF596Q8TC21 504 aa9.19□□□□□ -0.94
CLSTN3-209ENST00000539982 PKIBQ9C010 78 aa9.19□□□□□ -0.94
CLSTN3-209ENST00000539982 PBOV1Q9GZY1 135 aa9.19□□□□□ -0.94
CLSTN3-209ENST00000539982 DNAJB9Q9UBS3 223 aa9.19□□□□□ -0.94
CLSTN3-209ENST00000539982 CCL24O00175 119 aa9.18□□□□□ -0.94
CLSTN3-209ENST00000539982 DHRS3O75911 302 aa9.18□□□□□ -0.94
CLSTN3-209ENST00000539982 IGLV1-47P01700 117 aa9.18□□□□□ -0.94
CLSTN3-209ENST00000539982 SNRNP70P08621 437 aaKnown RBP9.18□□□□□ -0.94
CLSTN3-209ENST00000539982 PEX2P28328 305 aa9.18□□□□□ -0.94
CLSTN3-209ENST00000539982 LUMP51884 338 aaPredicted RBP9.18□□□□□ -0.94
CLSTN3-209ENST00000539982 RAB25P57735 213 aa9.18□□□□□ -0.94
CLSTN3-209ENST00000539982 SNAPC1Q16533 368 aa9.18□□□□□ -0.94
CLSTN3-209ENST00000539982 C9orf66Q5T8R8 295 aa9.18□□□□□ -0.94
CLSTN3-209ENST00000539982 COMMD1Q8N668 190 aa9.18□□□□□ -0.94
CLSTN3-209ENST00000539982 TPRX1Q8N7U7 411 aa9.18□□□□□ -0.94
CLSTN3-209ENST00000539982 DNAH7Q8WXX0 4024 aa9.18□□□□□ -0.94
CLSTN3-209ENST00000539982 CREB3L1Q96BA8 519 aa9.18□□□□□ -0.94
CLSTN3-209ENST00000539982 RAX2Q96IS3 184 aa9.18□□□□□ -0.94
CLSTN3-209ENST00000539982 RCHY1Q96PM5 261 aa9.18□□□□□ -0.94
CLSTN3-209ENST00000539982 DUX3Q96PT4 197 aa9.18□□□□□ -0.94
CLSTN3-209ENST00000539982 DGCR6LQ9BY27 220 aa9.18□□□□□ -0.94
CLSTN3-209ENST00000539982 MROQ9BYG7 248 aa9.18□□□□□ -0.94
CLSTN3-209ENST00000539982 PALMDQ9NP74 551 aa9.18□□□□□ -0.94
CLSTN3-209ENST00000539982 GPR173Q9NS66 373 aa9.18□□□□□ -0.94
CLSTN3-209ENST00000539982 LAMP5Q9UJQ1 280 aa9.18□□□□□ -0.94
CLSTN3-209ENST00000539982 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.18□□□□□ -0.94
CLSTN3-209ENST00000539982 ARRDC5A6NEK1 342 aa9.17□□□□□ -0.94
CLSTN3-209ENST00000539982 PRR23D1E9PI22 279 aaPredicted RBP9.17□□□□□ -0.94
CLSTN3-209ENST00000539982 F8VVB4 439 aa9.17□□□□□ -0.94
CLSTN3-209ENST00000539982 F8VWA3 439 aa9.17□□□□□ -0.94
CLSTN3-209ENST00000539982 FAM106CPP0CH98 169 aa9.17□□□□□ -0.94
CLSTN3-209ENST00000539982 PRR23D2P0DMB1 279 aaPredicted RBP9.17□□□□□ -0.94
CLSTN3-209ENST00000539982 FASP25445 335 aa9.17□□□□□ -0.94
CLSTN3-209ENST00000539982 CEACAM3P40198 252 aa9.17□□□□□ -0.94
CLSTN3-209ENST00000539982 HCCSP53701 268 aa9.17□□□□□ -0.94
CLSTN3-209ENST00000539982 SLC35B1P78383 322 aa9.17□□□□□ -0.94
CLSTN3-209ENST00000539982 GRK1Q15835 563 aa9.17□□□□□ -0.94
CLSTN3-209ENST00000539982 BAIAP2L2Q6UXY1 529 aa9.17□□□□□ -0.94
CLSTN3-209ENST00000539982 THNSL2Q86YJ6 484 aa9.17□□□□□ -0.94
CLSTN3-209ENST00000539982 OR52N4Q8NGI2 321 aa9.17□□□□□ -0.94
CLSTN3-209ENST00000539982 OR5M8Q8NGP6 311 aa9.17□□□□□ -0.94
CLSTN3-209ENST00000539982 NOL4LQ96MY1 436 aaPredicted RBP9.17□□□□□ -0.94
CLSTN3-209ENST00000539982 SEBOXQ9HB31 216 aaPredicted RBP9.17□□□□□ -0.94
CLSTN3-209ENST00000539982 MTCH1Q9NZJ7 389 aa9.17□□□□□ -0.94
CLSTN3-209ENST00000539982 SCOCQ9UIL1 159 aa9.17□□□□□ -0.94
CLSTN3-209ENST00000539982 UBE2J1Q9Y385 318 aaPredicted RBP9.17□□□□□ -0.94
CLSTN3-209ENST00000539982 MOB4Q9Y3A3 225 aa9.17□□□□□ -0.94
CLSTN3-209ENST00000539982 HSPE1-MOB4S4R3N1 261 aa9.17□□□□□ -0.94
CLSTN3-209ENST00000539982 SERPINE3A8MV23 424 aa9.16□□□□□ -0.94
CLSTN3-209ENST00000539982 OOSP1A8MZH6 123 aa9.16□□□□□ -0.94
CLSTN3-209ENST00000539982 LY6LH3BQJ8 138 aa9.16□□□□□ -0.94
CLSTN3-209ENST00000539982 BUB1B-PAK6H3BSN5 160 aa9.16□□□□□ -0.94
CLSTN3-209ENST00000539982 PRODHO43272 600 aa9.16□□□□□ -0.94
CLSTN3-209ENST00000539982 ZNF254O75437 659 aa9.16□□□□□ -0.94
CLSTN3-209ENST00000539982 ERP29P30040 261 aaKnown RBP9.16□□□□□ -0.94
CLSTN3-209ENST00000539982 MNDAP41218 407 aa9.16□□□□□ -0.94
CLSTN3-209ENST00000539982 ESRRGP62508 458 aa9.16□□□□□ -0.94
CLSTN3-209ENST00000539982 PPP1R8Q12972 351 aaKnown RBP9.16□□□□□ -0.94
CLSTN3-209ENST00000539982 ATP6AP1Q15904 470 aa9.16□□□□□ -0.94
CLSTN3-209ENST00000539982 MICAQ29983 383 aa9.16□□□□□ -0.94
CLSTN3-209ENST00000539982 TPTE2P1Q5T6R2 138 aa9.16□□□□□ -0.94
CLSTN3-209ENST00000539982 SLX4IPQ5VYV7 408 aa9.16□□□□□ -0.94
CLSTN3-209ENST00000539982 CCDC144NLQ6NUI1 221 aa9.16□□□□□ -0.94
CLSTN3-209ENST00000539982 CD300LDQ6UXZ3 194 aa9.16□□□□□ -0.94
CLSTN3-209ENST00000539982 HEPN1Q6WQI6 88 aa9.16□□□□□ -0.94
CLSTN3-209ENST00000539982 TRAPPC6BQ86SZ2 158 aa9.16□□□□□ -0.94
CLSTN3-209ENST00000539982 EGFL6Q8IUX8 553 aa9.16□□□□□ -0.94
CLSTN3-209ENST00000539982 SBSPONQ8IVN8 264 aa9.16□□□□□ -0.94
CLSTN3-209ENST00000539982 IQCF1Q8N6M8 205 aa9.16□□□□□ -0.94
CLSTN3-209ENST00000539982 TEX47Q8TBZ9 253 aa9.16□□□□□ -0.94
CLSTN3-209ENST00000539982 CEP19Q96LK0 163 aa9.16□□□□□ -0.94
CLSTN3-209ENST00000539982 YIPF3Q9GZM5 350 aa9.16□□□□□ -0.94
CLSTN3-209ENST00000539982 CHST6Q9GZX3 395 aa9.16□□□□□ -0.94
CLSTN3-209ENST00000539982 NUFIP1Q9UHK0 495 aaKnown RBP9.16□□□□□ -0.94
CLSTN3-209ENST00000539982 ZNF256Q9Y2P7 627 aaPredicted RBP9.16□□□□□ -0.94
CLSTN3-209ENST00000539982 SMAD5-AS1Q9Y6J3 95 aa9.16□□□□□ -0.94
CLSTN3-209ENST00000539982 V9GYS6 101 aa9.16□□□□□ -0.94
CLSTN3-209ENST00000539982 DNAH1Q9P2D7 4330 aa9.15□□□□□ -0.94
CLSTN3-209ENST00000539982 FAM230AA0A1W2PPH8 454 aa9.15□□□□□ -0.94
CLSTN3-209ENST00000539982 FAM90A18PA6NE21 464 aa9.15□□□□□ -0.94
CLSTN3-209ENST00000539982 FAM90A16PA6NEW6 464 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms