RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 C1orf147Q96MC9 270 aaPredicted RBP10□□□□□ -0.81
VTN-202ENST00000539746 PRRT1Q99946 306 aa10□□□□□ -0.81
VTN-202ENST00000539746 FAM234AQ9H0X4 552 aa10□□□□□ -0.81
VTN-202ENST00000539746 BANF2Q9H503 90 aa10□□□□□ -0.81
VTN-202ENST00000539746 CHMP1AQ9HD42 196 aaPredicted RBP10□□□□□ -0.81
VTN-202ENST00000539746 KCNIP1Q9NZI2 227 aa10□□□□□ -0.81
VTN-202ENST00000539746 SLC23A1Q9UHI7 598 aa10□□□□□ -0.81
VTN-202ENST00000539746 A0A0B4J203 849 aa9.99□□□□□ -0.81
VTN-202ENST00000539746 ZSCAN5BA6NJL1 495 aa9.99□□□□□ -0.81
VTN-202ENST00000539746 ZNF736B4DX44 427 aaPredicted RBP9.99□□□□□ -0.81
VTN-202ENST00000539746 AKAIN1P0CW23 69 aa9.99□□□□□ -0.81
VTN-202ENST00000539746 BCL3P20749 454 aa9.99□□□□□ -0.81
VTN-202ENST00000539746 SSTR2P30874 369 aa9.99□□□□□ -0.81
VTN-202ENST00000539746 GDNFP39905 211 aa9.99□□□□□ -0.81
VTN-202ENST00000539746 OR3A3P47888 321 aa9.99□□□□□ -0.81
VTN-202ENST00000539746 ERVK11-1P61568 191 aa9.99□□□□□ -0.81
VTN-202ENST00000539746 SWI5Q1ZZU3 235 aa9.99□□□□□ -0.81
VTN-202ENST00000539746 PAN3Q58A45 887 aaKnown RBP9.99□□□□□ -0.81
VTN-202ENST00000539746 RNASE10Q5GAN6 216 aaKnown RBP9.99□□□□□ -0.81
VTN-202ENST00000539746 NKAPLQ5M9Q1 402 aa9.99□□□□□ -0.81
VTN-202ENST00000539746 C6orf183Q5T699 404 aa9.99□□□□□ -0.81
VTN-202ENST00000539746 WDR82Q6UXN9 313 aa9.99□□□□□ -0.81
VTN-202ENST00000539746 TRAPPC6BQ86SZ2 158 aa9.99□□□□□ -0.81
VTN-202ENST00000539746 ZNF561Q8N587 486 aa9.99□□□□□ -0.81
VTN-202ENST00000539746 POC5Q8NA72 575 aa9.99□□□□□ -0.81
VTN-202ENST00000539746 TMEM229BQ8NBD8 167 aa9.99□□□□□ -0.81
VTN-202ENST00000539746 TMEM104Q8NE00 496 aa9.99□□□□□ -0.81
VTN-202ENST00000539746 RDH5Q92781 318 aa9.99□□□□□ -0.81
VTN-202ENST00000539746 RAB1CQ92928 201 aa9.99□□□□□ -0.81
VTN-202ENST00000539746 RAB39BQ96DA2 213 aa9.99□□□□□ -0.81
VTN-202ENST00000539746 CMSS1Q9BQ75 279 aaKnown RBP9.99□□□□□ -0.81
VTN-202ENST00000539746 OCSTAMPQ9BR26 566 aa9.99□□□□□ -0.81
VTN-202ENST00000539746 NCOR1P1Q9H4R4 102 aa9.99□□□□□ -0.81
VTN-202ENST00000539746 ZNF286AQ9HBT8 521 aa9.99□□□□□ -0.81
VTN-202ENST00000539746 HES4Q9HCC6 221 aa9.99□□□□□ -0.81
VTN-202ENST00000539746 MTCH1Q9NZJ7 389 aa9.99□□□□□ -0.81
VTN-202ENST00000539746 NLKQ9UBE8 527 aa9.99□□□□□ -0.81
VTN-202ENST00000539746 OPN4Q9UHM6 478 aa9.99□□□□□ -0.81
VTN-202ENST00000539746 RBMX2Q9Y388 322 aaKnown RBP9.99□□□□□ -0.81
VTN-202ENST00000539746 IGHV1-69-2A0A0G2JMI3 117 aa9.98□□□□□ -0.81
VTN-202ENST00000539746 FAM240BA0A1B0GVZ2 78 aa9.98□□□□□ -0.81
VTN-202ENST00000539746 MFNGO00587 321 aa9.98□□□□□ -0.81
VTN-202ENST00000539746 HAND1O96004 215 aa9.98□□□□□ -0.81
VTN-202ENST00000539746 PRB1P04280 392 aa9.98□□□□□ -0.81
VTN-202ENST00000539746 CSN2P05814 226 aa9.98□□□□□ -0.81
VTN-202ENST00000539746 HEXAP06865 529 aa9.98□□□□□ -0.81
VTN-202ENST00000539746 CHATP28329 748 aa9.98□□□□□ -0.81
VTN-202ENST00000539746 GRNP28799 593 aaKnown RBP9.98□□□□□ -0.81
VTN-202ENST00000539746 S100GP29377 79 aa9.98□□□□□ -0.81
VTN-202ENST00000539746 GLP1RP43220 463 aa9.98□□□□□ -0.81
VTN-202ENST00000539746 ARPC4P59998 168 aa9.98□□□□□ -0.81
VTN-202ENST00000539746 PAX5Q02548 391 aa9.98□□□□□ -0.81
VTN-202ENST00000539746 MAB21L1Q13394 359 aa9.98□□□□□ -0.81
VTN-202ENST00000539746 ZNF79Q15937 498 aa9.98□□□□□ -0.81
VTN-202ENST00000539746 TAF9Q16594 264 aa9.98□□□□□ -0.81
VTN-202ENST00000539746 ZNF260Q3ZCT1 412 aa9.98□□□□□ -0.81
VTN-202ENST00000539746 CHRFAM7AQ494W8 412 aa9.98□□□□□ -0.81
VTN-202ENST00000539746 PLET1Q6UQ28 207 aa9.98□□□□□ -0.81
VTN-202ENST00000539746 ACP7Q6ZNF0 438 aa9.98□□□□□ -0.81
VTN-202ENST00000539746 Q6ZR03 302 aa9.98□□□□□ -0.81
VTN-202ENST00000539746 DNM1P46Q6ZS02 220 aa9.98□□□□□ -0.81
VTN-202ENST00000539746 NLRC3Q7RTR2 1065 aa9.98□□□□□ -0.81
VTN-202ENST00000539746 MOGAT3Q86VF5 341 aa9.98□□□□□ -0.81
VTN-202ENST00000539746 LYSMD2Q8IV50 215 aa9.98□□□□□ -0.81
VTN-202ENST00000539746 ARRDC1Q8N5I2 433 aa9.98□□□□□ -0.81
VTN-202ENST00000539746 GPX8Q8TED1 209 aa9.98□□□□□ -0.81
VTN-202ENST00000539746 ITLN1Q8WWA0 313 aa9.98□□□□□ -0.81
VTN-202ENST00000539746 VRK1Q99986 396 aaPredicted RBP9.98□□□□□ -0.81
VTN-202ENST00000539746 SLC25A21Q9BQT8 299 aaPredicted RBP9.98□□□□□ -0.81
VTN-202ENST00000539746 PECRQ9BY49 303 aa9.98□□□□□ -0.81
VTN-202ENST00000539746 GCM1Q9NP62 436 aa9.98□□□□□ -0.81
VTN-202ENST00000539746 RBFOX1Q9NWB1 397 aaKnown RBP9.98□□□□□ -0.81
VTN-202ENST00000539746 RCC2Q9P258 522 aaKnown RBP9.98□□□□□ -0.81
VTN-202ENST00000539746 WIPI2Q9Y4P8 454 aa9.98□□□□□ -0.81
VTN-202ENST00000539746 A0A1W2PQ09 198 aa9.97□□□□□ -0.81
VTN-202ENST00000539746 TMEM30CPA0ZSE6 113 aa9.97□□□□□ -0.81
VTN-202ENST00000539746 OOEPA6NGQ2 149 aa9.97□□□□□ -0.81
VTN-202ENST00000539746 J3QRK9 145 aa9.97□□□□□ -0.81
VTN-202ENST00000539746 LGALS8O00214 317 aa9.97□□□□□ -0.81
VTN-202ENST00000539746 GEMIN2O14893 280 aaKnown RBP9.97□□□□□ -0.81
VTN-202ENST00000539746 LYRM1O43325 122 aa9.97□□□□□ -0.81
VTN-202ENST00000539746 SFTPBP07988 381 aa9.97□□□□□ -0.81
VTN-202ENST00000539746 LMO1P25800 156 aa9.97□□□□□ -0.81
VTN-202ENST00000539746 EFNB2P52799 333 aa9.97□□□□□ -0.81
VTN-202ENST00000539746 TMEM33P57088 247 aa9.97□□□□□ -0.81
VTN-202ENST00000539746 DSCR9P59020 149 aa9.97□□□□□ -0.81
VTN-202ENST00000539746 GRK1Q15835 563 aa9.97□□□□□ -0.81
VTN-202ENST00000539746 STEAP3Q658P3 488 aa9.97□□□□□ -0.81
VTN-202ENST00000539746 OR10K2Q6IF99 312 aa9.97□□□□□ -0.81
VTN-202ENST00000539746 LPCAT3Q6P1A2 487 aa9.97□□□□□ -0.81
VTN-202ENST00000539746 Q6ZS49 121 aa9.97□□□□□ -0.81
VTN-202ENST00000539746 C22orf34Q6ZV56 151 aa9.97□□□□□ -0.81
VTN-202ENST00000539746 LRP11Q86VZ4 500 aa9.97□□□□□ -0.81
VTN-202ENST00000539746 IZUMO1Q8IYV9 350 aa9.97□□□□□ -0.81
VTN-202ENST00000539746 SPICQ8N5J4 248 aa9.97□□□□□ -0.81
VTN-202ENST00000539746 ST8SIA4Q92187 359 aa9.97□□□□□ -0.81
VTN-202ENST00000539746 SEH1LQ96EE3 360 aa9.97□□□□□ -0.81
VTN-202ENST00000539746 C14orf79Q96F83 325 aa9.97□□□□□ -0.81
VTN-202ENST00000539746 ARHGAP5-AS1Q96IT6 56 aa9.97□□□□□ -0.81
VTN-202ENST00000539746 SNX22Q96L94 193 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms