RNA–Protein interactions for RNA: ENST00000539244.6

SS18-204, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 977 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-204ENST00000539244 GNGT1P63211 74 aa10.83□□□□□ -0.68
SS18-204ENST00000539244 BDH1Q02338 343 aa10.83□□□□□ -0.68
SS18-204ENST00000539244 ZNF146Q15072 292 aa10.83□□□□□ -0.68
SS18-204ENST00000539244 PTGES3Q15185 160 aaKnown RBP10.83□□□□□ -0.68
SS18-204ENST00000539244 GRK1Q15835 563 aa10.83□□□□□ -0.68
SS18-204ENST00000539244 AADACL4Q5VUY2 407 aa10.83□□□□□ -0.68
SS18-204ENST00000539244 SLX4IPQ5VYV7 408 aa10.83□□□□□ -0.68
SS18-204ENST00000539244 NXNL2Q5VZ03 156 aa10.83□□□□□ -0.68
SS18-204ENST00000539244 FAHD1Q6P587 224 aa10.83□□□□□ -0.68
SS18-204ENST00000539244 CCDC121Q6ZUS5 278 aa10.83□□□□□ -0.68
SS18-204ENST00000539244 RTN4RL2Q86UN3 420 aa10.83□□□□□ -0.68
SS18-204ENST00000539244 EGFL6Q8IUX8 553 aa10.83□□□□□ -0.68
SS18-204ENST00000539244 TPRX1Q8N7U7 411 aa10.83□□□□□ -0.68
SS18-204ENST00000539244 CCDC54Q8NEL0 328 aa10.83□□□□□ -0.68
SS18-204ENST00000539244 OR4X2Q8NGF9 303 aa10.83□□□□□ -0.68
SS18-204ENST00000539244 SLAMF9Q96A28 289 aa10.83□□□□□ -0.68
SS18-204ENST00000539244 NRBF2Q96F24 287 aa10.83□□□□□ -0.68
SS18-204ENST00000539244 PRRG3Q9BZD7 231 aa10.83□□□□□ -0.68
SS18-204ENST00000539244 PLEKHA1Q9HB21 404 aa10.83□□□□□ -0.68
SS18-204ENST00000539244 PAPOLBQ9NRJ5 636 aaKnown RBP10.83□□□□□ -0.68
SS18-204ENST00000539244 INPP5EQ9NRR6 644 aa10.83□□□□□ -0.68
SS18-204ENST00000539244 DPM3Q9P2X0 92 aa10.83□□□□□ -0.68
SS18-204ENST00000539244 UBE2J1Q9Y385 318 aaPredicted RBP10.83□□□□□ -0.68
SS18-204ENST00000539244 KIAA2026Q5HYC2 2103 aa10.82□□□□□ -0.68
SS18-204ENST00000539244 TRBV2A0A0J9YWF9 115 aa10.82□□□□□ -0.68
SS18-204ENST00000539244 WI2-2373I1.2A0A1W2PRP0 233 aa10.82□□□□□ -0.68
SS18-204ENST00000539244 ZNF670-ZNF695F2Z2N8 137 aa10.82□□□□□ -0.68
SS18-204ENST00000539244 MGST3O14880 152 aa10.82□□□□□ -0.68
SS18-204ENST00000539244 OR2F2O95006 317 aa10.82□□□□□ -0.68
SS18-204ENST00000539244 CLIC3O95833 236 aa10.82□□□□□ -0.68
SS18-204ENST00000539244 IGLV1-47P01700 117 aa10.82□□□□□ -0.68
SS18-204ENST00000539244 AMY1AP04745 511 aa10.82□□□□□ -0.68
SS18-204ENST00000539244 AMY2AP04746 511 aa10.82□□□□□ -0.68
SS18-204ENST00000539244 OR52W1Q6IF63 320 aa10.82□□□□□ -0.68
SS18-204ENST00000539244 SLC25A26Q70HW3 274 aa10.82□□□□□ -0.68
SS18-204ENST00000539244 BCDIN3DQ7Z5W3 292 aaKnown RBP10.82□□□□□ -0.68
SS18-204ENST00000539244 CATSPERDQ86XM0 798 aa10.82□□□□□ -0.68
SS18-204ENST00000539244 ZNF596Q8TC21 504 aa10.82□□□□□ -0.68
SS18-204ENST00000539244 EMG1Q92979 244 aaKnown RBP10.82□□□□□ -0.68
SS18-204ENST00000539244 C10orf35Q96D05 121 aa10.82□□□□□ -0.68
SS18-204ENST00000539244 RBM14Q96PK6 669 aaKnown RBP10.82□□□□□ -0.68
SS18-204ENST00000539244 SLC25A33Q9BSK2 321 aa10.82□□□□□ -0.68
SS18-204ENST00000539244 CHST6Q9GZX3 395 aa10.82□□□□□ -0.68
SS18-204ENST00000539244 IL36RNQ9UBH0 155 aa10.82□□□□□ -0.68
SS18-204ENST00000539244 HHLA2Q9UM44 414 aa10.82□□□□□ -0.68
SS18-204ENST00000539244 SYT7O43581 403 aa10.81□□□□□ -0.68
SS18-204ENST00000539244 FKBP6O75344 327 aa10.81□□□□□ -0.68
SS18-204ENST00000539244 LPLP06858 475 aa10.81□□□□□ -0.68
SS18-204ENST00000539244 GABRR1P24046 479 aa10.81□□□□□ -0.68
SS18-204ENST00000539244 CD34P28906 385 aa10.81□□□□□ -0.68
SS18-204ENST00000539244 OR3A1P47881 315 aa10.81□□□□□ -0.68
SS18-204ENST00000539244 DAPP51397 102 aa10.81□□□□□ -0.68
SS18-204ENST00000539244 ARHGDIBP52566 201 aa10.81□□□□□ -0.68
SS18-204ENST00000539244 P2RX3P56373 397 aa10.81□□□□□ -0.68
SS18-204ENST00000539244 CDC42P60953 191 aa10.81□□□□□ -0.68
SS18-204ENST00000539244 CBX1P83916 185 aa10.81□□□□□ -0.68
SS18-204ENST00000539244 ABCA11PQ4W5N1 156 aa10.81□□□□□ -0.68
SS18-204ENST00000539244 SPIN3Q5JUX0 258 aa10.81□□□□□ -0.68
SS18-204ENST00000539244 HEPN1Q6WQI6 88 aa10.81□□□□□ -0.68
SS18-204ENST00000539244 SSX6Q7RTT6 188 aa10.81□□□□□ -0.68
SS18-204ENST00000539244 ABHD12Q8N2K0 398 aa10.81□□□□□ -0.68
SS18-204ENST00000539244 LINC00482Q8N8I6 264 aa10.81□□□□□ -0.68
SS18-204ENST00000539244 DNAAF1Q8NEP3 725 aa10.81□□□□□ -0.68
SS18-204ENST00000539244 TMEM163Q8TC26 289 aa10.81□□□□□ -0.68
SS18-204ENST00000539244 CAPSLQ8WWF8 208 aa10.81□□□□□ -0.68
SS18-204ENST00000539244 CORO2AQ92828 525 aa10.81□□□□□ -0.68
SS18-204ENST00000539244 BORCS8Q96FH0 119 aa10.81□□□□□ -0.68
SS18-204ENST00000539244 B9D2Q9BPU9 175 aa10.81□□□□□ -0.68
SS18-204ENST00000539244 GPR61Q9BZJ8 451 aa10.81□□□□□ -0.68
SS18-204ENST00000539244 H2AFY2Q9P0M6 372 aaPredicted RBP10.81□□□□□ -0.68
SS18-204ENST00000539244 TENM3Q9P273 2699 aa10.81□□□□□ -0.68
SS18-204ENST00000539244 RYR3Q15413 4870 aa10.8□□□□□ -0.68
SS18-204ENST00000539244 LEUTXA8MZ59 168 aa10.8□□□□□ -0.68
SS18-204ENST00000539244 ENTPD6O75354 484 aa10.8□□□□□ -0.68
SS18-204ENST00000539244 RPP14O95059 124 aaKnown RBP10.8□□□□□ -0.68
SS18-204ENST00000539244 SERPINA3P01011 423 aa10.8□□□□□ -0.68
SS18-204ENST00000539244 KRT8P05787 483 aa10.8□□□□□ -0.68
SS18-204ENST00000539244 CD24P25063 80 aa10.8□□□□□ -0.68
SS18-204ENST00000539244 NPBWR2P48146 333 aa10.8□□□□□ -0.68
SS18-204ENST00000539244 DEFB121Q5J5C9 76 aa10.8□□□□□ -0.68
SS18-204ENST00000539244 C10orf99Q6UWK7 81 aa10.8□□□□□ -0.68
SS18-204ENST00000539244 BAIAP2L2Q6UXY1 529 aa10.8□□□□□ -0.68
SS18-204ENST00000539244 GID4Q8IVV7 300 aa10.8□□□□□ -0.68
SS18-204ENST00000539244 FAM58AQ8N1B3 248 aa10.8□□□□□ -0.68
SS18-204ENST00000539244 OSR2Q8N2R0 312 aa10.8□□□□□ -0.68
SS18-204ENST00000539244 TCEANCQ8N8B7 351 aa10.8□□□□□ -0.68
SS18-204ENST00000539244 YIPF7Q8N8F6 280 aa10.8□□□□□ -0.68
SS18-204ENST00000539244 PP6455Q8WZ26 134 aa10.8□□□□□ -0.68
SS18-204ENST00000539244 STMN2Q93045 179 aa10.8□□□□□ -0.68
SS18-204ENST00000539244 CREB3L1Q96BA8 519 aa10.8□□□□□ -0.68
SS18-204ENST00000539244 WWC2-AS2Q96NR7 200 aa10.8□□□□□ -0.68
SS18-204ENST00000539244 THTPAQ9BU02 230 aa10.8□□□□□ -0.68
SS18-204ENST00000539244 GAL3ST2Q9H3Q3 398 aa10.8□□□□□ -0.68
SS18-204ENST00000539244 RBFOX1Q9NWB1 397 aaKnown RBP10.8□□□□□ -0.68
SS18-204ENST00000539244 TAS2R3Q9NYW6 316 aa10.8□□□□□ -0.68
SS18-204ENST00000539244 A0A087X0M5 115 aa10.79□□□□□ -0.68
SS18-204ENST00000539244 A0A1B0GX30 115 aa10.79□□□□□ -0.68
SS18-204ENST00000539244 TCRBV3S1A0A5B6 114 aa10.79□□□□□ -0.68
SS18-204ENST00000539244 ZAR1LA6NP61 321 aa10.79□□□□□ -0.68
SS18-204ENST00000539244 E9PQ18 207 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms