RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 IGHV1-18A0A0C4DH31 117 aa12.05□□□□□ -0.48
ACTN1-205ENST00000538545 MEX3AA1L020 520 aaKnown RBP12.05□□□□□ -0.48
ACTN1-205ENST00000538545 K7ENP7 123 aa12.05□□□□□ -0.48
ACTN1-205ENST00000538545 CDIPTO14735 213 aa12.05□□□□□ -0.48
ACTN1-205ENST00000538545 IL13RA1P78552 427 aa12.05□□□□□ -0.48
ACTN1-205ENST00000538545 IKZF1Q13422 519 aa12.05□□□□□ -0.48
ACTN1-205ENST00000538545 LY6G6FQ5SQ64 297 aa12.05□□□□□ -0.48
ACTN1-205ENST00000538545 INO80CQ6PI98 192 aaPredicted RBP12.05□□□□□ -0.48
ACTN1-205ENST00000538545 BHLHA15Q7RTS1 189 aaPredicted RBP12.05□□□□□ -0.48
ACTN1-205ENST00000538545 C12orf45Q8N5I9 185 aaPredicted RBP12.05□□□□□ -0.48
ACTN1-205ENST00000538545 OR5L1Q8NGL2 311 aa12.05□□□□□ -0.48
ACTN1-205ENST00000538545 GTF3AQ92664 365 aaKnown RBP12.05□□□□□ -0.48
ACTN1-205ENST00000538545 SNRNP40Q96DI7 357 aaKnown RBP12.05□□□□□ -0.48
ACTN1-205ENST00000538545 ZNF2Q9BSG1 426 aaPredicted RBP12.05□□□□□ -0.48
ACTN1-205ENST00000538545 PPA2Q9H2U2 334 aa12.05□□□□□ -0.48
ACTN1-205ENST00000538545 SLC2A8Q9NY64 477 aa12.05□□□□□ -0.48
ACTN1-205ENST00000538545 NPTNQ9Y639 398 aa12.05□□□□□ -0.48
ACTN1-205ENST00000538545 ITPR1Q14643 2758 aa12.05□□□□□ -0.48
ACTN1-205ENST00000538545 KCNAB3O43448 404 aa12.05□□□□□ -0.48
ACTN1-205ENST00000538545 ZNF780AO75290 641 aaPredicted RBP12.05□□□□□ -0.48
ACTN1-205ENST00000538545 ARPC4P59998 168 aa12.05□□□□□ -0.48
ACTN1-205ENST00000538545 C1orf185Q5T7R7 199 aa12.05□□□□□ -0.48
ACTN1-205ENST00000538545 VHLLQ6RSH7 139 aa12.05□□□□□ -0.48
ACTN1-205ENST00000538545 SLC22A25Q6T423 547 aa12.05□□□□□ -0.48
ACTN1-205ENST00000538545 OVCH2Q7RTZ1 564 aa12.05□□□□□ -0.48
ACTN1-205ENST00000538545 UBALD1Q8TB05 177 aa12.05□□□□□ -0.48
ACTN1-205ENST00000538545 MED30Q96HR3 178 aa12.05□□□□□ -0.48
ACTN1-205ENST00000538545 TRAPPC2LH3BP13 241 aa12.04□□□□□ -0.48
ACTN1-205ENST00000538545 CBR1P16152 277 aa12.04□□□□□ -0.48
ACTN1-205ENST00000538545 ZBTB25P24278 435 aa12.04□□□□□ -0.48
ACTN1-205ENST00000538545 CEBPDP49716 269 aaPredicted RBP12.04□□□□□ -0.48
ACTN1-205ENST00000538545 ZNF81P51508 661 aa12.04□□□□□ -0.48
ACTN1-205ENST00000538545 FXYD4P59646 89 aa12.04□□□□□ -0.48
ACTN1-205ENST00000538545 SNTB1Q13884 538 aaKnown RBP12.04□□□□□ -0.48
ACTN1-205ENST00000538545 LRP11Q86VZ4 500 aa12.04□□□□□ -0.48
ACTN1-205ENST00000538545 TMEM17Q86X19 198 aa12.04□□□□□ -0.48
ACTN1-205ENST00000538545 OR5A2Q8NGI9 324 aa12.04□□□□□ -0.48
ACTN1-205ENST00000538545 NEK7Q8TDX7 302 aa12.04□□□□□ -0.48
ACTN1-205ENST00000538545 TOMM40LQ969M1 308 aa12.04□□□□□ -0.48
ACTN1-205ENST00000538545 CPNE2Q96FN4 548 aaPredicted RBP12.04□□□□□ -0.48
ACTN1-205ENST00000538545 GPHA2Q96T91 129 aa12.04□□□□□ -0.48
ACTN1-205ENST00000538545 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.04□□□□□ -0.48
ACTN1-205ENST00000538545 ZNF107Q9UII5 783 aaPredicted RBP12.04□□□□□ -0.48
ACTN1-205ENST00000538545 SSUH2Q9Y2M2 353 aa12.04□□□□□ -0.48
ACTN1-205ENST00000538545 MSRB2Q9Y3D2 182 aa12.04□□□□□ -0.48
ACTN1-205ENST00000538545 C9orf170A2RU37 121 aa12.04□□□□□ -0.48
ACTN1-205ENST00000538545 MPTX1A8MV57 137 aa12.04□□□□□ -0.48
ACTN1-205ENST00000538545 PDCD6O75340 191 aa12.04□□□□□ -0.48
ACTN1-205ENST00000538545 CRYABP02511 175 aaKnown RBP12.04□□□□□ -0.48
ACTN1-205ENST00000538545 CD34P28906 385 aa12.04□□□□□ -0.48
ACTN1-205ENST00000538545 ZNF154Q13106 437 aa12.04□□□□□ -0.48
ACTN1-205ENST00000538545 IGSF11Q5DX21 431 aa12.04□□□□□ -0.48
ACTN1-205ENST00000538545 SLC25A42Q86VD7 318 aa12.04□□□□□ -0.48
ACTN1-205ENST00000538545 DOLPP1Q86YN1 238 aa12.04□□□□□ -0.48
ACTN1-205ENST00000538545 RTBDNQ9BSG5 229 aaPredicted RBP12.04□□□□□ -0.48
ACTN1-205ENST00000538545 WDR13Q9H1Z4 485 aa12.04□□□□□ -0.48
ACTN1-205ENST00000538545 UFSP2Q9NUQ7 469 aa12.04□□□□□ -0.48
ACTN1-205ENST00000538545 OPN4Q9UHM6 478 aa12.04□□□□□ -0.48
ACTN1-205ENST00000538545 ABCA4P78363 2273 aa12.04□□□□□ -0.48
ACTN1-205ENST00000538545 F5H5P2 479 aa12.03□□□□□ -0.48
ACTN1-205ENST00000538545 M0R1B8 84 aa12.03□□□□□ -0.48
ACTN1-205ENST00000538545 ATXN7O15265 892 aaPredicted RBP12.03□□□□□ -0.48
ACTN1-205ENST00000538545 MLNRO43193 412 aa12.03□□□□□ -0.48
ACTN1-205ENST00000538545 NFYAP23511 347 aaPredicted RBP12.03□□□□□ -0.48
ACTN1-205ENST00000538545 MPPED2Q15777 294 aa12.03□□□□□ -0.48
ACTN1-205ENST00000538545 VAX1Q5SQQ9 334 aa12.03□□□□□ -0.48
ACTN1-205ENST00000538545 ZBTB37Q5TC79 503 aa12.03□□□□□ -0.48
ACTN1-205ENST00000538545 C20orf204Q6ZNR8 217 aa12.03□□□□□ -0.48
ACTN1-205ENST00000538545 LIX1LQ8IVB5 337 aa12.03□□□□□ -0.48
ACTN1-205ENST00000538545 SPICQ8N5J4 248 aa12.03□□□□□ -0.48
ACTN1-205ENST00000538545 ADAT1Q9BUB4 502 aaKnown RBP12.03□□□□□ -0.48
ACTN1-205ENST00000538545 OBP2BQ9NPH6 170 aa12.03□□□□□ -0.48
ACTN1-205ENST00000538545 ANXA10Q9UJ72 324 aa12.03□□□□□ -0.48
ACTN1-205ENST00000538545 SPTBN1Q01082 2364 aaKnown RBP12.03□□□□□ -0.48
ACTN1-205ENST00000538545 OR5H1A6NKK0 313 aa12.03□□□□□ -0.48
ACTN1-205ENST00000538545 FUT3P21217 361 aa12.03□□□□□ -0.48
ACTN1-205ENST00000538545 TDGF1P3P51864 188 aa12.03□□□□□ -0.48
ACTN1-205ENST00000538545 GNG3P63215 75 aa12.03□□□□□ -0.48
ACTN1-205ENST00000538545 SORDQ00796 357 aa12.03□□□□□ -0.48
ACTN1-205ENST00000538545 MRPL49Q13405 166 aaKnown RBP12.03□□□□□ -0.48
ACTN1-205ENST00000538545 FBXW12Q6X9E4 464 aa12.03□□□□□ -0.48
ACTN1-205ENST00000538545 SCCPDHQ8NBX0 429 aa12.03□□□□□ -0.48
ACTN1-205ENST00000538545 RANBP3Q9H6Z4 567 aaPredicted RBP12.03□□□□□ -0.48
ACTN1-205ENST00000538545 GPR132Q9UNW8 380 aa12.03□□□□□ -0.48
ACTN1-205ENST00000538545 FXYD6-FXYD2A0A087WZ82 144 aa12.02□□□□□ -0.48
ACTN1-205ENST00000538545 IGHV2OR16-5A0A0B4J2B6 119 aa12.02□□□□□ -0.48
ACTN1-205ENST00000538545 WNT9BO14905 357 aa12.02□□□□□ -0.48
ACTN1-205ENST00000538545 ARPC5O15511 151 aa12.02□□□□□ -0.48
ACTN1-205ENST00000538545 ADAP1O75689 374 aa12.02□□□□□ -0.48
ACTN1-205ENST00000538545 OR5H8P0DN80 308 aa12.02□□□□□ -0.48
ACTN1-205ENST00000538545 PGAM2P15259 253 aa12.02□□□□□ -0.48
ACTN1-205ENST00000538545 AP2S1P53680 142 aaPredicted RBP12.02□□□□□ -0.48
ACTN1-205ENST00000538545 FGF12P61328 243 aa12.02□□□□□ -0.48
ACTN1-205ENST00000538545 SUPT4H1P63272 117 aaKnown RBP12.02□□□□□ -0.48
ACTN1-205ENST00000538545 FAM189A2Q15884 450 aa12.02□□□□□ -0.48
ACTN1-205ENST00000538545 PRAMEF6Q5VXH4 476 aa12.02□□□□□ -0.48
ACTN1-205ENST00000538545 ZNF324BQ6AW86 544 aaPredicted RBP12.02□□□□□ -0.48
ACTN1-205ENST00000538545 Q6ZR03 302 aa12.02□□□□□ -0.48
ACTN1-205ENST00000538545 LYG2Q86SG7 212 aa12.02□□□□□ -0.48
ACTN1-205ENST00000538545 MKXQ8IYA7 352 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms