RNA–Protein interactions for RNA: ENST00000537120.5

DDB1-208, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,215 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-208ENST00000537120 ACTA1P68133 377 aa6.82□□□□□ -1.32
DDB1-208ENST00000537120 ZNF273Q14593 569 aa6.82□□□□□ -1.32
DDB1-208ENST00000537120 GRK1Q15835 563 aa6.82□□□□□ -1.32
DDB1-208ENST00000537120 SSX2Q16385 188 aa6.82□□□□□ -1.32
DDB1-208ENST00000537120 C2orf68Q2NKX9 166 aa6.82□□□□□ -1.32
DDB1-208ENST00000537120 MEDAGQ5VYS4 303 aa6.82□□□□□ -1.32
DDB1-208ENST00000537120 HCP5Q6MZN7 132 aa6.82□□□□□ -1.32
DDB1-208ENST00000537120 ZFP1Q6P2D0 407 aa6.82□□□□□ -1.32
DDB1-208ENST00000537120 Q8IYB0 196 aa6.82□□□□□ -1.32
DDB1-208ENST00000537120 FAM58AQ8N1B3 248 aa6.82□□□□□ -1.32
DDB1-208ENST00000537120 PRSS35Q8N3Z0 413 aa6.82□□□□□ -1.32
DDB1-208ENST00000537120 ZNF676Q8N7Q3 588 aa6.82□□□□□ -1.32
DDB1-208ENST00000537120 C11orf44Q8N8P7 122 aa6.82□□□□□ -1.32
DDB1-208ENST00000537120 OR13C3Q8NGS6 347 aa6.82□□□□□ -1.32
DDB1-208ENST00000537120 OR2G2Q8NGZ5 317 aa6.82□□□□□ -1.32
DDB1-208ENST00000537120 NDNFQ8TB73 568 aa6.82□□□□□ -1.32
DDB1-208ENST00000537120 Q96MT0 163 aa6.82□□□□□ -1.32
DDB1-208ENST00000537120 GABARAPL3Q9BY60 117 aa6.82□□□□□ -1.32
DDB1-208ENST00000537120 NPFFR1Q9GZQ6 430 aa6.82□□□□□ -1.32
DDB1-208ENST00000537120 HES4Q9HCC6 221 aa6.82□□□□□ -1.32
DDB1-208ENST00000537120 MTCH1Q9NZJ7 389 aa6.82□□□□□ -1.32
DDB1-208ENST00000537120 FBLN5Q9UBX5 448 aa6.82□□□□□ -1.32
DDB1-208ENST00000537120 ZMAT5Q9UDW3 170 aaKnown RBP6.82□□□□□ -1.32
DDB1-208ENST00000537120 SIGLEC9Q9Y336 463 aa6.82□□□□□ -1.32
DDB1-208ENST00000537120 C17orf98A8MV24 154 aa6.81□□□□□ -1.32
DDB1-208ENST00000537120 F8VVB4 439 aa6.81□□□□□ -1.32
DDB1-208ENST00000537120 F8VWA3 439 aa6.81□□□□□ -1.32
DDB1-208ENST00000537120 SLC16A6O15403 523 aa6.81□□□□□ -1.32
DDB1-208ENST00000537120 RAB13P51153 203 aa6.81□□□□□ -1.32
DDB1-208ENST00000537120 ERVK11-1P61568 191 aa6.81□□□□□ -1.32
DDB1-208ENST00000537120 ZNF85Q03923 595 aa6.81□□□□□ -1.32
DDB1-208ENST00000537120 MEF2CQ06413 473 aaPredicted RBP6.81□□□□□ -1.32
DDB1-208ENST00000537120 KPNB1Q14974 876 aaKnown RBP6.81□□□□□ -1.32
DDB1-208ENST00000537120 HERPUD1Q15011 391 aa6.81□□□□□ -1.32
DDB1-208ENST00000537120 AANATQ16613 207 aa6.81□□□□□ -1.32
DDB1-208ENST00000537120 C11orf88Q6PI97 169 aa6.81□□□□□ -1.32
DDB1-208ENST00000537120 LHFPL2Q6ZUX7 228 aa6.81□□□□□ -1.32
DDB1-208ENST00000537120 LHFPL4Q7Z7J7 247 aa6.81□□□□□ -1.32
DDB1-208ENST00000537120 LHFPL3Q86UP9 236 aa6.81□□□□□ -1.32
DDB1-208ENST00000537120 OR8H2Q8N162 312 aa6.81□□□□□ -1.32
DDB1-208ENST00000537120 ACBD7Q8N6N7 88 aa6.81□□□□□ -1.32
DDB1-208ENST00000537120 DNAAF1Q8NEP3 725 aa6.81□□□□□ -1.32
DDB1-208ENST00000537120 RPS4Y2Q8TD47 263 aa6.81□□□□□ -1.32
DDB1-208ENST00000537120 CAPSLQ8WWF8 208 aa6.81□□□□□ -1.32
DDB1-208ENST00000537120 STMN2Q93045 179 aa6.81□□□□□ -1.32
DDB1-208ENST00000537120 RFT1Q96AA3 541 aa6.81□□□□□ -1.32
DDB1-208ENST00000537120 FOXRED1Q96CU9 486 aaPredicted RBP6.81□□□□□ -1.32
DDB1-208ENST00000537120 MALSU1Q96EH3 234 aa6.81□□□□□ -1.32
DDB1-208ENST00000537120 ZNF714Q96N38 554 aa6.81□□□□□ -1.32
DDB1-208ENST00000537120 CHST5Q9GZS9 411 aa6.81□□□□□ -1.32
DDB1-208ENST00000537120 CHST6Q9GZX3 395 aa6.81□□□□□ -1.32
DDB1-208ENST00000537120 FRRS1LQ9P0K9 344 aa6.81□□□□□ -1.32
DDB1-208ENST00000537120 PITPNC1Q9UKF7 332 aa6.81□□□□□ -1.32
DDB1-208ENST00000537120 HHLA2Q9UM44 414 aa6.81□□□□□ -1.32
DDB1-208ENST00000537120 GSTK1Q9Y2Q3 226 aa6.81□□□□□ -1.32
DDB1-208ENST00000537120 TBL2Q9Y4P3 447 aaKnown RBP6.81□□□□□ -1.32
DDB1-208ENST00000537120 HILPDAQ9Y5L2 63 aa6.81□□□□□ -1.32
DDB1-208ENST00000537120 GMPPBQ9Y5P6 360 aa6.81□□□□□ -1.32
DDB1-208ENST00000537120 NOTCH1P46531 2555 aa6.81□□□□□ -1.32
DDB1-208ENST00000537120 IGKV1-27A0A075B6S5 117 aa6.8□□□□□ -1.32
DDB1-208ENST00000537120 SIRPB1O00241 398 aa6.8□□□□□ -1.32
DDB1-208ENST00000537120 F2RL2O00254 374 aa6.8□□□□□ -1.32
DDB1-208ENST00000537120 EI24O14681 340 aa6.8□□□□□ -1.32
DDB1-208ENST00000537120 MGST3O14880 152 aa6.8□□□□□ -1.32
DDB1-208ENST00000537120 MAGEB3O15480 346 aa6.8□□□□□ -1.32
DDB1-208ENST00000537120 FADS2O95864 444 aaKnown RBP6.8□□□□□ -1.32
DDB1-208ENST00000537120 ALPLP05186 524 aa6.8□□□□□ -1.32
DDB1-208ENST00000537120 HCKP08631 526 aa6.8□□□□□ -1.32
DDB1-208ENST00000537120 RPSAP08865 295 aaKnown RBP6.8□□□□□ -1.32
DDB1-208ENST00000537120 IGHV1-8P0DP01 117 aa6.8□□□□□ -1.32
DDB1-208ENST00000537120 TMEM225BP0DP42 221 aa6.8□□□□□ -1.32
DDB1-208ENST00000537120 BCL3P20749 454 aa6.8□□□□□ -1.32
DDB1-208ENST00000537120 AZGP1P25311 298 aaKnown RBP6.8□□□□□ -1.32
DDB1-208ENST00000537120 KIR3DL2P43630 455 aa6.8□□□□□ -1.32
DDB1-208ENST00000537120 NPBWR2P48146 333 aa6.8□□□□□ -1.32
DDB1-208ENST00000537120 ALDH3A2P51648 485 aa6.8□□□□□ -1.32
DDB1-208ENST00000537120 GBX2P52951 348 aaPredicted RBP6.8□□□□□ -1.32
DDB1-208ENST00000537120 SNRPGP62308 76 aaKnown RBP6.8□□□□□ -1.32
DDB1-208ENST00000537120 ACTA2P62736 377 aa6.8□□□□□ -1.32
DDB1-208ENST00000537120 ACTG2P63267 376 aa6.8□□□□□ -1.32
DDB1-208ENST00000537120 SLC34A1Q06495 639 aa6.8□□□□□ -1.32
DDB1-208ENST00000537120 PDZK1IP1Q13113 114 aa6.8□□□□□ -1.32
DDB1-208ENST00000537120 ALKBH1Q13686 389 aaKnown RBP6.8□□□□□ -1.32
DDB1-208ENST00000537120 OCLNQ16625 522 aa6.8□□□□□ -1.32
DDB1-208ENST00000537120 PDLIM3Q53GG5 364 aaPredicted RBP6.8□□□□□ -1.32
DDB1-208ENST00000537120 CCBE1Q6UXH8 406 aaPredicted RBP6.8□□□□□ -1.32
DDB1-208ENST00000537120 LIAT1Q6ZQX7 453 aa6.8□□□□□ -1.32
DDB1-208ENST00000537120 ZBTB49Q6ZSB9 765 aa6.8□□□□□ -1.32
DDB1-208ENST00000537120 Q6ZSR3 168 aa6.8□□□□□ -1.32
DDB1-208ENST00000537120 UTS2BQ765I0 119 aa6.8□□□□□ -1.32
DDB1-208ENST00000537120 CBR4Q8N4T8 237 aa6.8□□□□□ -1.32
DDB1-208ENST00000537120 C11orf42Q8N5U0 333 aa6.8□□□□□ -1.32
DDB1-208ENST00000537120 KLHDC1Q8N7A1 406 aa6.8□□□□□ -1.32
DDB1-208ENST00000537120 TPRX1Q8N7U7 411 aa6.8□□□□□ -1.32
DDB1-208ENST00000537120 ADAT3Q96EY9 351 aaPredicted RBP6.8□□□□□ -1.32
DDB1-208ENST00000537120 HRASLS5Q96KN8 279 aa6.8□□□□□ -1.32
DDB1-208ENST00000537120 OPALINQ96PE5 141 aa6.8□□□□□ -1.32
DDB1-208ENST00000537120 C9orf16Q9BUW7 83 aa6.8□□□□□ -1.32
DDB1-208ENST00000537120 PRSS22Q9GZN4 317 aa6.8□□□□□ -1.32
DDB1-208ENST00000537120 RANBP3Q9H6Z4 567 aaPredicted RBP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms