RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 FAM104BQ5XKR9 115 aa2.97□□□□□ -1.93
PRKDC-208ENST00000536710 COPS6Q7L5N1 327 aa2.97□□□□□ -1.93
PRKDC-208ENST00000536710 OR4K17Q8NGC6 315 aa2.97□□□□□ -1.93
PRKDC-208ENST00000536710 OR1P1Q8NH06 330 aa2.97□□□□□ -1.93
PRKDC-208ENST00000536710 OR2AE1Q8NHA4 323 aa2.97□□□□□ -1.93
PRKDC-208ENST00000536710 ITLN2Q8WWU7 325 aaPredicted RBP2.97□□□□□ -1.93
PRKDC-208ENST00000536710 YPEL4Q96NS1 127 aa2.97□□□□□ -1.93
PRKDC-208ENST00000536710 PEBP4Q96S96 227 aa2.97□□□□□ -1.93
PRKDC-208ENST00000536710 THTPAQ9BU02 230 aa2.97□□□□□ -1.93
PRKDC-208ENST00000536710 INIPQ9NRY2 104 aa2.97□□□□□ -1.93
PRKDC-208ENST00000536710 IZUMO1RA6ND01 250 aa2.96□□□□□ -1.94
PRKDC-208ENST00000536710 SLC37A4O43826 429 aa2.96□□□□□ -1.94
PRKDC-208ENST00000536710 NPPAP01160 153 aa2.96□□□□□ -1.94
PRKDC-208ENST00000536710 M6PRP20645 277 aa2.96□□□□□ -1.94
PRKDC-208ENST00000536710 TEAD1P28347 426 aa2.96□□□□□ -1.94
PRKDC-208ENST00000536710 IMPA1P29218 277 aa2.96□□□□□ -1.94
PRKDC-208ENST00000536710 RPA3P35244 121 aaPredicted RBP2.96□□□□□ -1.94
PRKDC-208ENST00000536710 KCNJ3P48549 501 aa2.96□□□□□ -1.94
PRKDC-208ENST00000536710 TTPAP49638 278 aa2.96□□□□□ -1.94
PRKDC-208ENST00000536710 TMEM241Q24JQ0 296 aa2.96□□□□□ -1.94
PRKDC-208ENST00000536710 CLLU1OSQ5K130 101 aa2.96□□□□□ -1.94
PRKDC-208ENST00000536710 CLEC12AQ5QGZ9 265 aa2.96□□□□□ -1.94
PRKDC-208ENST00000536710 GALNT10Q86SR1 603 aa2.96□□□□□ -1.94
PRKDC-208ENST00000536710 LRRC6Q86X45 466 aa2.96□□□□□ -1.94
PRKDC-208ENST00000536710 C10orf107Q8IVU9 208 aa2.96□□□□□ -1.94
PRKDC-208ENST00000536710 SPICQ8N5J4 248 aa2.96□□□□□ -1.94
PRKDC-208ENST00000536710 ZNF680Q8NEM1 530 aa2.96□□□□□ -1.94
PRKDC-208ENST00000536710 ZNF555Q8NEP9 628 aa2.96□□□□□ -1.94
PRKDC-208ENST00000536710 TWIST2Q8WVJ9 160 aa2.96□□□□□ -1.94
PRKDC-208ENST00000536710 CYTH2Q99418 400 aa2.96□□□□□ -1.94
PRKDC-208ENST00000536710 SLC25A31Q9H0C2 315 aa2.96□□□□□ -1.94
PRKDC-208ENST00000536710 POMKQ9H5K3 350 aa2.96□□□□□ -1.94
PRKDC-208ENST00000536710 RDH14Q9HBH5 336 aa2.96□□□□□ -1.94
PRKDC-208ENST00000536710 TMEM38BQ9NVV0 291 aa2.96□□□□□ -1.94
PRKDC-208ENST00000536710 ENPP5Q9UJA9 477 aa2.96□□□□□ -1.94
PRKDC-208ENST00000536710 HSBP1L1C9JCN9 74 aa2.95□□□□□ -1.94
PRKDC-208ENST00000536710 H3BP45 60 aa2.95□□□□□ -1.94
PRKDC-208ENST00000536710 NEMFO60524 1076 aa2.95□□□□□ -1.94
PRKDC-208ENST00000536710 SHOX2O60902 331 aaPredicted RBP2.95□□□□□ -1.94
PRKDC-208ENST00000536710 IGKV5-2P06315 115 aa2.95□□□□□ -1.94
PRKDC-208ENST00000536710 SCGB1C2P0DMR2 95 aa2.95□□□□□ -1.94
PRKDC-208ENST00000536710 PRTN3P24158 256 aa2.95□□□□□ -1.94
PRKDC-208ENST00000536710 PRKCDQ05655 676 aa2.95□□□□□ -1.94
PRKDC-208ENST00000536710 BSXQ3C1V8 233 aa2.95□□□□□ -1.94
PRKDC-208ENST00000536710 LINC00303Q3SY05 128 aa2.95□□□□□ -1.94
PRKDC-208ENST00000536710 Q499Y3 187 aa2.95□□□□□ -1.94
PRKDC-208ENST00000536710 Q6ZT83 130 aa2.95□□□□□ -1.94
PRKDC-208ENST00000536710 SCGB1C1Q8TD33 95 aa2.95□□□□□ -1.94
PRKDC-208ENST00000536710 TSGA10Q9BZW7 698 aa2.95□□□□□ -1.94
PRKDC-208ENST00000536710 USH1CQ9Y6N9 552 aa2.95□□□□□ -1.94
PRKDC-208ENST00000536710 NRCAMQ92823 1304 aa2.94□□□□□ -1.94
PRKDC-208ENST00000536710 ANKRD12Q6UB98 2062 aa2.94□□□□□ -1.94
PRKDC-208ENST00000536710 NISCHQ9Y2I1 1504 aa2.94□□□□□ -1.94
PRKDC-208ENST00000536710 SPRR5A0A1B0GTR4 108 aa2.94□□□□□ -1.94
PRKDC-208ENST00000536710 LINC00854A0A1B0GVQ3 168 aa2.94□□□□□ -1.94
PRKDC-208ENST00000536710 ERICH2A1L162 156 aa2.94□□□□□ -1.94
PRKDC-208ENST00000536710 CD300LBA8K4G0 201 aa2.94□□□□□ -1.94
PRKDC-208ENST00000536710 F8VP50 259 aa2.94□□□□□ -1.94
PRKDC-208ENST00000536710 M0QX08 132 aa2.94□□□□□ -1.94
PRKDC-208ENST00000536710 PLPP3O14495 311 aa2.94□□□□□ -1.94
PRKDC-208ENST00000536710 UBDO15205 165 aa2.94□□□□□ -1.94
PRKDC-208ENST00000536710 KCNK2O95069 426 aa2.94□□□□□ -1.94
PRKDC-208ENST00000536710 FADS2O95864 444 aaKnown RBP2.94□□□□□ -1.94
PRKDC-208ENST00000536710 CD5P06127 495 aa2.94□□□□□ -1.94
PRKDC-208ENST00000536710 PFN1P07737 140 aaKnown RBP2.94□□□□□ -1.94
PRKDC-208ENST00000536710 SPAM1P38567 509 aa2.94□□□□□ -1.94
PRKDC-208ENST00000536710 LGALS7P47929 136 aa2.94□□□□□ -1.94
PRKDC-208ENST00000536710 GCLMP48507 274 aa2.94□□□□□ -1.94
PRKDC-208ENST00000536710 FAM53BQ14153 422 aa2.94□□□□□ -1.94
PRKDC-208ENST00000536710 LYPD1Q8N2G4 141 aa2.94□□□□□ -1.94
PRKDC-208ENST00000536710 OR2K2Q8NGT1 345 aa2.94□□□□□ -1.94
PRKDC-208ENST00000536710 ZNF721Q8TF20 911 aa2.94□□□□□ -1.94
PRKDC-208ENST00000536710 C2orf15Q8WU43 125 aaKnown RBP2.94□□□□□ -1.94
PRKDC-208ENST00000536710 OR5P2Q8WZ92 322 aa2.94□□□□□ -1.94
PRKDC-208ENST00000536710 CCL17Q92583 94 aa2.94□□□□□ -1.94
PRKDC-208ENST00000536710 FXYD5Q96DB9 178 aa2.94□□□□□ -1.94
PRKDC-208ENST00000536710 PITX2Q99697 317 aa2.94□□□□□ -1.94
PRKDC-208ENST00000536710 ULBP1Q9BZM6 244 aa2.94□□□□□ -1.94
PRKDC-208ENST00000536710 MAT2BQ9NZL9 334 aa2.94□□□□□ -1.94
PRKDC-208ENST00000536710 RBM12B-AS1Q9P1G2 102 aa2.94□□□□□ -1.94
PRKDC-208ENST00000536710 RPRD2Q5VT52 1461 aaKnown RBP2.94□□□□□ -1.94
PRKDC-208ENST00000536710 KIF26AQ9ULI4 1882 aaPredicted RBP2.94□□□□□ -1.94
PRKDC-208ENST00000536710 GYG2O15488 501 aa2.93□□□□□ -1.94
PRKDC-208ENST00000536710 MYO1DO94832 1006 aa2.93□□□□□ -1.94
PRKDC-208ENST00000536710 TNFAIP8O95379 198 aa2.93□□□□□ -1.94
PRKDC-208ENST00000536710 NQO2P16083 231 aa2.93□□□□□ -1.94
PRKDC-208ENST00000536710 AQP5P55064 265 aa2.93□□□□□ -1.94
PRKDC-208ENST00000536710 RPS11P62280 158 aaKnown RBP eCLIP2.93□□□□□ -1.94
PRKDC-208ENST00000536710 FLI1Q01543 452 aaPredicted RBP2.93□□□□□ -1.94
PRKDC-208ENST00000536710 FMODQ06828 376 aa2.93□□□□□ -1.94
PRKDC-208ENST00000536710 IL15RAQ13261 267 aa2.93□□□□□ -1.94
PRKDC-208ENST00000536710 TPBGQ13641 420 aa2.93□□□□□ -1.94
PRKDC-208ENST00000536710 FLOT2Q14254 428 aa2.93□□□□□ -1.94
PRKDC-208ENST00000536710 ERICH5Q6P6B1 374 aa2.93□□□□□ -1.94
PRKDC-208ENST00000536710 TMEM136Q6ZRR5 245 aa2.93□□□□□ -1.94
PRKDC-208ENST00000536710 TPGS1Q6ZTW0 290 aa2.93□□□□□ -1.94
PRKDC-208ENST00000536710 TMEM144Q7Z5S9 345 aa2.93□□□□□ -1.94
PRKDC-208ENST00000536710 OR2Y1Q8NGV0 311 aa2.93□□□□□ -1.94
PRKDC-208ENST00000536710 BIRC8Q96P09 236 aa2.93□□□□□ -1.94
PRKDC-208ENST00000536710 SERPINB11Q96P15 392 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms