RNA–Protein interactions for RNA: ENST00000536548.5

CPSF7-216, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-216ENST00000536548 FAM60AQ9NP50 221 aa6.81□□□□□ -1.32
CPSF7-216ENST00000536548 CHST11Q9NPF2 352 aa6.81□□□□□ -1.32
CPSF7-216ENST00000536548 PNO1Q9NRX1 252 aaKnown RBP6.81□□□□□ -1.32
CPSF7-216ENST00000536548 POLR1DQ9Y2S0 133 aa6.81□□□□□ -1.32
CPSF7-216ENST00000536548 HS3ST3A1Q9Y663 406 aa6.81□□□□□ -1.32
CPSF7-216ENST00000536548 ARGFXA6NJG6 315 aa6.8□□□□□ -1.32
CPSF7-216ENST00000536548 B4DEV8 164 aa6.8□□□□□ -1.32
CPSF7-216ENST00000536548 FTCDNL1E5RQL4 147 aa6.8□□□□□ -1.32
CPSF7-216ENST00000536548 H7C1Q1 480 aa6.8□□□□□ -1.32
CPSF7-216ENST00000536548 PPP1R2P9O14990 202 aa6.8□□□□□ -1.32
CPSF7-216ENST00000536548 HSPA12AO43301 675 aa6.8□□□□□ -1.32
CPSF7-216ENST00000536548 RAD51DO75771 328 aa6.8□□□□□ -1.32
CPSF7-216ENST00000536548 PTBP3O95758 552 aaKnown RBP6.8□□□□□ -1.32
CPSF7-216ENST00000536548 DDAH2O95865 285 aa6.8□□□□□ -1.32
CPSF7-216ENST00000536548 SCGB1D2O95969 90 aa6.8□□□□□ -1.32
CPSF7-216ENST00000536548 KNG1P01042 644 aa6.8□□□□□ -1.32
CPSF7-216ENST00000536548 HBE1P02100 147 aa6.8□□□□□ -1.32
CPSF7-216ENST00000536548 ARG1P05089 322 aa6.8□□□□□ -1.32
CPSF7-216ENST00000536548 JMJD7P0C870 316 aa6.8□□□□□ -1.32
CPSF7-216ENST00000536548 HOXB4P17483 251 aaPredicted RBP6.8□□□□□ -1.32
CPSF7-216ENST00000536548 PI3P19957 117 aa6.8□□□□□ -1.32
CPSF7-216ENST00000536548 LMO1P25800 156 aa6.8□□□□□ -1.32
CPSF7-216ENST00000536548 DUSP1P28562 367 aa6.8□□□□□ -1.32
CPSF7-216ENST00000536548 GPX4P36969 197 aaPredicted RBP6.8□□□□□ -1.32
CPSF7-216ENST00000536548 OR3A4PP47883 348 aa6.8□□□□□ -1.32
CPSF7-216ENST00000536548 TMEM50BP56557 158 aa6.8□□□□□ -1.32
CPSF7-216ENST00000536548 RPS23P62266 143 aaKnown RBP6.8□□□□□ -1.32
CPSF7-216ENST00000536548 GRB2P62993 217 aaKnown RBP6.8□□□□□ -1.32
CPSF7-216ENST00000536548 SRPXP78539 464 aa6.8□□□□□ -1.32
CPSF7-216ENST00000536548 HSF1Q00613 529 aa6.8□□□□□ -1.32
CPSF7-216ENST00000536548 ABCA11PQ4W5N1 156 aa6.8□□□□□ -1.32
CPSF7-216ENST00000536548 OTPQ5XKR4 325 aa6.8□□□□□ -1.32
CPSF7-216ENST00000536548 SLC22A25Q6T423 547 aa6.8□□□□□ -1.32
CPSF7-216ENST00000536548 SSX9Q7RTT3 188 aa6.8□□□□□ -1.32
CPSF7-216ENST00000536548 LGI3Q8N145 548 aa6.8□□□□□ -1.32
CPSF7-216ENST00000536548 SLC22A18ASQ8N1D0 253 aa6.8□□□□□ -1.32
CPSF7-216ENST00000536548 LRTM2Q8N967 370 aa6.8□□□□□ -1.32
CPSF7-216ENST00000536548 CCDC71LQ8N9Z2 235 aa6.8□□□□□ -1.32
CPSF7-216ENST00000536548 GPR119Q8TDV5 335 aa6.8□□□□□ -1.32
CPSF7-216ENST00000536548 SLC37A2Q8TED4 501 aa6.8□□□□□ -1.32
CPSF7-216ENST00000536548 PTPMT1Q8WUK0 201 aaPredicted RBP6.8□□□□□ -1.32
CPSF7-216ENST00000536548 GTF3AQ92664 365 aaKnown RBP6.8□□□□□ -1.32
CPSF7-216ENST00000536548 SLAMF9Q96A28 289 aa6.8□□□□□ -1.32
CPSF7-216ENST00000536548 ADIPOR1Q96A54 375 aa6.8□□□□□ -1.32
CPSF7-216ENST00000536548 S100PBPQ96BU1 408 aa6.8□□□□□ -1.32
CPSF7-216ENST00000536548 DDIT4LQ96D03 193 aa6.8□□□□□ -1.32
CPSF7-216ENST00000536548 FBXO17Q96EF6 278 aa6.8□□□□□ -1.32
CPSF7-216ENST00000536548 C1orf147Q96MC9 270 aaPredicted RBP6.8□□□□□ -1.32
CPSF7-216ENST00000536548 TGM7Q96PF1 710 aa6.8□□□□□ -1.32
CPSF7-216ENST00000536548 GAL3ST4Q96RP7 486 aa6.8□□□□□ -1.32
CPSF7-216ENST00000536548 C20orf24Q9BUV8 137 aa6.8□□□□□ -1.32
CPSF7-216ENST00000536548 TM2D1Q9BX74 207 aa6.8□□□□□ -1.32
CPSF7-216ENST00000536548 PECRQ9BY49 303 aa6.8□□□□□ -1.32
CPSF7-216ENST00000536548 OR8D2Q9GZM6 311 aa6.8□□□□□ -1.32
CPSF7-216ENST00000536548 NELFAQ9H3P2 528 aa6.8□□□□□ -1.32
CPSF7-216ENST00000536548 DECR2Q9NUI1 292 aa6.8□□□□□ -1.32
CPSF7-216ENST00000536548 PLA2G2EQ9NZK7 142 aa6.8□□□□□ -1.32
CPSF7-216ENST00000536548 KLHL13Q9P2N7 655 aa6.8□□□□□ -1.32
CPSF7-216ENST00000536548 COPS7AQ9UBW8 275 aa6.8□□□□□ -1.32
CPSF7-216ENST00000536548 ERRFI1Q9UJM3 462 aaPredicted RBP6.8□□□□□ -1.32
CPSF7-216ENST00000536548 TP53TG5Q9Y2B4 290 aa6.8□□□□□ -1.32
CPSF7-216ENST00000536548 TNRC6AQ8NDV7 1962 aaKnown RBP6.79□□□□□ -1.32
CPSF7-216ENST00000536548 NSG1A0A0A6YYJ2 146 aa6.79□□□□□ -1.32
CPSF7-216ENST00000536548 A0A1W2PNV4 684 aa6.79□□□□□ -1.32
CPSF7-216ENST00000536548 FAM230AA0A1W2PPH8 454 aa6.79□□□□□ -1.32
CPSF7-216ENST00000536548 RBFOX3A6NFN3 312 aa6.79□□□□□ -1.32
CPSF7-216ENST00000536548 ANKUB1A6NFN9 424 aa6.79□□□□□ -1.32
CPSF7-216ENST00000536548 C9orf172C9J069 976 aa6.79□□□□□ -1.32
CPSF7-216ENST00000536548 RPL36A-HNRNPH2H7BZ11 118 aa6.79□□□□□ -1.32
CPSF7-216ENST00000536548 K7N7A8 449 aa6.79□□□□□ -1.32
CPSF7-216ENST00000536548 SDCBPO00560 298 aaPredicted RBP6.79□□□□□ -1.32
CPSF7-216ENST00000536548 NKX2-8O15522 239 aa6.79□□□□□ -1.32
CPSF7-216ENST00000536548 ST8SIA3O43173 380 aa6.79□□□□□ -1.32
CPSF7-216ENST00000536548 IGKV3-11P04433 115 aa6.79□□□□□ -1.32
CPSF7-216ENST00000536548 HPNP05981 417 aa6.79□□□□□ -1.32
CPSF7-216ENST00000536548 OR13C7P0DN81 318 aa6.79□□□□□ -1.32
CPSF7-216ENST00000536548 NR2C1P13056 603 aa6.79□□□□□ -1.32
CPSF7-216ENST00000536548 DAOP14920 347 aa6.79□□□□□ -1.32
CPSF7-216ENST00000536548 LIFP15018 202 aa6.79□□□□□ -1.32
CPSF7-216ENST00000536548 HIST1H1BP16401 226 aaKnown RBP6.79□□□□□ -1.32
CPSF7-216ENST00000536548 BLVRBP30043 206 aaPredicted RBP6.79□□□□□ -1.32
CPSF7-216ENST00000536548 SFTPDP35247 375 aa6.79□□□□□ -1.32
CPSF7-216ENST00000536548 TAGLN2P37802 199 aaKnown RBP6.79□□□□□ -1.32
CPSF7-216ENST00000536548 APOBEC1P41238 236 aaKnown RBP6.79□□□□□ -1.32
CPSF7-216ENST00000536548 UBE2KP61086 200 aa6.79□□□□□ -1.32
CPSF7-216ENST00000536548 HHEXQ03014 270 aa6.79□□□□□ -1.32
CPSF7-216ENST00000536548 FMODQ06828 376 aa6.79□□□□□ -1.32
CPSF7-216ENST00000536548 MRPL49Q13405 166 aaKnown RBP6.79□□□□□ -1.32
CPSF7-216ENST00000536548 GNMTQ14749 295 aa6.79□□□□□ -1.32
CPSF7-216ENST00000536548 DEFB133Q30KQ1 61 aa6.79□□□□□ -1.32
CPSF7-216ENST00000536548 C9orf152Q5JTZ5 239 aa6.79□□□□□ -1.32
CPSF7-216ENST00000536548 THEM4Q5T1C6 240 aa6.79□□□□□ -1.32
CPSF7-216ENST00000536548 DPPA3Q6W0C5 159 aa6.79□□□□□ -1.32
CPSF7-216ENST00000536548 FBXW12Q6X9E4 464 aa6.79□□□□□ -1.32
CPSF7-216ENST00000536548 ABHD12BQ7Z5M8 362 aaPredicted RBP6.79□□□□□ -1.32
CPSF7-216ENST00000536548 ZNF761Q86XN6 746 aaPredicted RBP6.79□□□□□ -1.32
CPSF7-216ENST00000536548 SLC38A9Q8NBW4 561 aa6.79□□□□□ -1.32
CPSF7-216ENST00000536548 ADPRHL1Q8NDY3 354 aa6.79□□□□□ -1.32
CPSF7-216ENST00000536548 TMEM104Q8NE00 496 aa6.79□□□□□ -1.32
CPSF7-216ENST00000536548 SEMA6DQ8NFY4 1073 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms