RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 CEACAM3P40198 252 aa10.38□□□□□ -0.75
TNFRSF1A-207ENST00000535958 MNDAP41218 407 aa10.38□□□□□ -0.75
TNFRSF1A-207ENST00000535958 FUT6P51993 359 aa10.38□□□□□ -0.75
TNFRSF1A-207ENST00000535958 MS4A2Q01362 244 aa10.38□□□□□ -0.75
TNFRSF1A-207ENST00000535958 LDLRAD2Q5SZI1 272 aa10.38□□□□□ -0.75
TNFRSF1A-207ENST00000535958 PLEKHG7Q6ZR37 379 aa10.38□□□□□ -0.75
TNFRSF1A-207ENST00000535958 SLC25A26Q70HW3 274 aa10.38□□□□□ -0.75
TNFRSF1A-207ENST00000535958 RTN4RL2Q86UN3 420 aa10.38□□□□□ -0.75
TNFRSF1A-207ENST00000535958 YIPF7Q8N8F6 280 aa10.38□□□□□ -0.75
TNFRSF1A-207ENST00000535958 BCAS4Q8TDM0 211 aa10.38□□□□□ -0.75
TNFRSF1A-207ENST00000535958 DNAJC9Q8WXX5 260 aa10.38□□□□□ -0.75
TNFRSF1A-207ENST00000535958 CREB3L1Q96BA8 519 aa10.38□□□□□ -0.75
TNFRSF1A-207ENST00000535958 APOL4Q9BPW4 351 aa10.38□□□□□ -0.75
TNFRSF1A-207ENST00000535958 MCRIP2Q9BUT9 160 aaKnown RBP10.38□□□□□ -0.75
TNFRSF1A-207ENST00000535958 PAPOLBQ9NRJ5 636 aaKnown RBP10.38□□□□□ -0.75
TNFRSF1A-207ENST00000535958 DPM3Q9P2X0 92 aa10.38□□□□□ -0.75
TNFRSF1A-207ENST00000535958 ZMAT5Q9UDW3 170 aaKnown RBP10.38□□□□□ -0.75
TNFRSF1A-207ENST00000535958 KMT2CQ8NEZ4 4911 aaKnown RBP10.38□□□□□ -0.75
TNFRSF1A-207ENST00000535958 TRGV10A0A0A0MS01 117 aa10.37□□□□□ -0.75
TNFRSF1A-207ENST00000535958 WI2-2373I1.2A0A1W2PRP0 233 aa10.37□□□□□ -0.75
TNFRSF1A-207ENST00000535958 FAM90A22PA8MWA6 464 aa10.37□□□□□ -0.75
TNFRSF1A-207ENST00000535958 LEUTXA8MZ59 168 aa10.37□□□□□ -0.75
TNFRSF1A-207ENST00000535958 PRR32B1ATL7 298 aa10.37□□□□□ -0.75
TNFRSF1A-207ENST00000535958 H3BSH0 61 aa10.37□□□□□ -0.75
TNFRSF1A-207ENST00000535958 M0QZK8 103 aa10.37□□□□□ -0.75
TNFRSF1A-207ENST00000535958 OR2F2O95006 317 aa10.37□□□□□ -0.75
TNFRSF1A-207ENST00000535958 FAM107AO95990 144 aa10.37□□□□□ -0.75
TNFRSF1A-207ENST00000535958 CD24P25063 80 aa10.37□□□□□ -0.75
TNFRSF1A-207ENST00000535958 SNU13P55769 128 aaKnown RBP10.37□□□□□ -0.75
TNFRSF1A-207ENST00000535958 UNQ9370/PRO34162Q6UXP9 181 aa10.37□□□□□ -0.75
TNFRSF1A-207ENST00000535958 TCF23Q7RTU1 214 aa10.37□□□□□ -0.75
TNFRSF1A-207ENST00000535958 TMEM179BQ7Z7N9 219 aa10.37□□□□□ -0.75
TNFRSF1A-207ENST00000535958 ADGRG5Q8IZF4 528 aa10.37□□□□□ -0.75
TNFRSF1A-207ENST00000535958 HS3ST5Q8IZT8 346 aa10.37□□□□□ -0.75
TNFRSF1A-207ENST00000535958 ABHD12Q8N2K0 398 aa10.37□□□□□ -0.75
TNFRSF1A-207ENST00000535958 OR4P4Q8NGL7 312 aa10.37□□□□□ -0.75
TNFRSF1A-207ENST00000535958 NSL1Q96IY1 281 aa10.37□□□□□ -0.75
TNFRSF1A-207ENST00000535958 MTCH1Q9NZJ7 389 aa10.37□□□□□ -0.75
TNFRSF1A-207ENST00000535958 UBE2J1Q9Y385 318 aaPredicted RBP10.37□□□□□ -0.75
TNFRSF1A-207ENST00000535958 A0A1B0GTI1 187 aa10.36□□□□□ -0.75
TNFRSF1A-207ENST00000535958 TMEM82A0PJX8 343 aa10.36□□□□□ -0.75
TNFRSF1A-207ENST00000535958 PSMB11A5LHX3 300 aa10.36□□□□□ -0.75
TNFRSF1A-207ENST00000535958 NUDT19A8MXV4 375 aa10.36□□□□□ -0.75
TNFRSF1A-207ENST00000535958 MGST3O14880 152 aa10.36□□□□□ -0.75
TNFRSF1A-207ENST00000535958 IGHA1P01876 353 aa10.36□□□□□ -0.75
TNFRSF1A-207ENST00000535958 PRKACAP17612 351 aa10.36□□□□□ -0.75
TNFRSF1A-207ENST00000535958 PRKACGP22612 351 aa10.36□□□□□ -0.75
TNFRSF1A-207ENST00000535958 CALB2P22676 271 aa10.36□□□□□ -0.75
TNFRSF1A-207ENST00000535958 POU3F4P49335 361 aa10.36□□□□□ -0.75
TNFRSF1A-207ENST00000535958 CRISP1P54107 249 aa10.36□□□□□ -0.75
TNFRSF1A-207ENST00000535958 ATP1B3P54709 279 aa10.36□□□□□ -0.75
TNFRSF1A-207ENST00000535958 P2RX3P56373 397 aa10.36□□□□□ -0.75
TNFRSF1A-207ENST00000535958 GNGT1P63211 74 aa10.36□□□□□ -0.75
TNFRSF1A-207ENST00000535958 RBM39Q14498 530 aaKnown RBP10.36□□□□□ -0.75
TNFRSF1A-207ENST00000535958 KPNB1Q14974 876 aaKnown RBP10.36□□□□□ -0.75
TNFRSF1A-207ENST00000535958 PRAMEF5Q5TYX0 476 aa10.36□□□□□ -0.75
TNFRSF1A-207ENST00000535958 CCDC144NLQ6NUI1 221 aa10.36□□□□□ -0.75
TNFRSF1A-207ENST00000535958 MEPCEQ7L2J0 689 aaKnown RBP10.36□□□□□ -0.75
TNFRSF1A-207ENST00000535958 SPATA24Q86W54 205 aa10.36□□□□□ -0.75
TNFRSF1A-207ENST00000535958 CCDC54Q8NEL0 328 aa10.36□□□□□ -0.75
TNFRSF1A-207ENST00000535958 CANT1Q8WVQ1 401 aa10.36□□□□□ -0.75
TNFRSF1A-207ENST00000535958 RBM14Q96PK6 669 aaKnown RBP10.36□□□□□ -0.75
TNFRSF1A-207ENST00000535958 B9D2Q9BPU9 175 aa10.36□□□□□ -0.75
TNFRSF1A-207ENST00000535958 CHST5Q9GZS9 411 aa10.36□□□□□ -0.75
TNFRSF1A-207ENST00000535958 INPP5EQ9NRR6 644 aa10.36□□□□□ -0.75
TNFRSF1A-207ENST00000535958 CLN6Q9NWW5 311 aa10.36□□□□□ -0.75
TNFRSF1A-207ENST00000535958 DSCAML1Q8TD84 2053 aa10.36□□□□□ -0.75
TNFRSF1A-207ENST00000535958 FAM172BPA6NC97 362 aa10.35□□□□□ -0.75
TNFRSF1A-207ENST00000535958 AQP12BA6NM10 295 aa10.35□□□□□ -0.75
TNFRSF1A-207ENST00000535958 F8VVB4 439 aa10.35□□□□□ -0.75
TNFRSF1A-207ENST00000535958 F8VWA3 439 aa10.35□□□□□ -0.75
TNFRSF1A-207ENST00000535958 SIRPB1O00241 398 aa10.35□□□□□ -0.75
TNFRSF1A-207ENST00000535958 MAGEB4O15481 346 aaPredicted RBP10.35□□□□□ -0.75
TNFRSF1A-207ENST00000535958 PRKYO43930 277 aa10.35□□□□□ -0.75
TNFRSF1A-207ENST00000535958 SRSF10O75494 262 aaKnown RBP10.35□□□□□ -0.75
TNFRSF1A-207ENST00000535958 CCL1P22362 96 aa10.35□□□□□ -0.75
TNFRSF1A-207ENST00000535958 CDK2P24941 298 aa10.35□□□□□ -0.75
TNFRSF1A-207ENST00000535958 RBP2P50120 134 aa10.35□□□□□ -0.75
TNFRSF1A-207ENST00000535958 KRTAP10-11P60412 298 aa10.35□□□□□ -0.75
TNFRSF1A-207ENST00000535958 BDH1Q02338 343 aa10.35□□□□□ -0.75
TNFRSF1A-207ENST00000535958 ZNF91Q05481 1191 aa10.35□□□□□ -0.75
TNFRSF1A-207ENST00000535958 TCTEX1D4Q5JR98 221 aa10.35□□□□□ -0.75
TNFRSF1A-207ENST00000535958 SPIN3Q5JUX0 258 aa10.35□□□□□ -0.75
TNFRSF1A-207ENST00000535958 FAM220AQ7Z4H9 259 aa10.35□□□□□ -0.75
TNFRSF1A-207ENST00000535958 GID4Q8IVV7 300 aa10.35□□□□□ -0.75
TNFRSF1A-207ENST00000535958 AQP12AQ8IXF9 295 aa10.35□□□□□ -0.75
TNFRSF1A-207ENST00000535958 FAM58AQ8N1B3 248 aa10.35□□□□□ -0.75
TNFRSF1A-207ENST00000535958 OSR2Q8N2R0 312 aa10.35□□□□□ -0.75
TNFRSF1A-207ENST00000535958 LINC00482Q8N8I6 264 aa10.35□□□□□ -0.75
TNFRSF1A-207ENST00000535958 OR4D6Q8NGJ1 314 aa10.35□□□□□ -0.75
TNFRSF1A-207ENST00000535958 TBX5Q99593 518 aa10.35□□□□□ -0.75
TNFRSF1A-207ENST00000535958 EXOSC4Q9NPD3 245 aaKnown RBP10.35□□□□□ -0.75
TNFRSF1A-207ENST00000535958 KRT84Q9NSB2 600 aa10.35□□□□□ -0.75
TNFRSF1A-207ENST00000535958 RBFOX1Q9NWB1 397 aaKnown RBP10.35□□□□□ -0.75
TNFRSF1A-207ENST00000535958 TRBV2A0A0J9YWF9 115 aa10.34□□□□□ -0.75
TNFRSF1A-207ENST00000535958 SH2D7A6NKC9 451 aaPredicted RBP10.34□□□□□ -0.75
TNFRSF1A-207ENST00000535958 SH2D1BO14796 132 aa10.34□□□□□ -0.75
TNFRSF1A-207ENST00000535958 FAM106CPP0CH98 169 aa10.34□□□□□ -0.75
TNFRSF1A-207ENST00000535958 DUSP1P28562 367 aa10.34□□□□□ -0.75
TNFRSF1A-207ENST00000535958 ERP29P30040 261 aaKnown RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms