RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 GSX1Q9H4S2 264 aaPredicted RBP16.79■□□□□ 0.28
SMPD1-210ENST00000534405 COL5A1P20908 1838 aaPredicted RBP16.79■□□□□ 0.28
SMPD1-210ENST00000534405 MEGF11A6BM72 1044 aa16.78■□□□□ 0.28
SMPD1-210ENST00000534405 LMO7DNF2Z398 122 aa16.78■□□□□ 0.28
SMPD1-210ENST00000534405 MPZL1O95297 269 aa16.78■□□□□ 0.28
SMPD1-210ENST00000534405 IL11P20809 199 aa16.78■□□□□ 0.28
SMPD1-210ENST00000534405 CEBPGP53567 150 aa16.78■□□□□ 0.28
SMPD1-210ENST00000534405 ETFRF1Q6IPR1 90 aa16.78■□□□□ 0.28
SMPD1-210ENST00000534405 OGFOD3Q6PK18 319 aa16.78■□□□□ 0.28
SMPD1-210ENST00000534405 ADPRHL1Q8NDY3 354 aa16.78■□□□□ 0.28
SMPD1-210ENST00000534405 ACY3Q96HD9 319 aa16.78■□□□□ 0.28
SMPD1-210ENST00000534405 HIST1H2AAQ96QV6 131 aa16.78■□□□□ 0.28
SMPD1-210ENST00000534405 SRD5A3Q9H8P0 318 aa16.78■□□□□ 0.28
SMPD1-210ENST00000534405 DCDC2BA2VCK2 349 aa16.78■□□□□ 0.28
SMPD1-210ENST00000534405 A6NIZ1 184 aa16.78■□□□□ 0.28
SMPD1-210ENST00000534405 DXOO77932 396 aaKnown RBP16.78■□□□□ 0.28
SMPD1-210ENST00000534405 DIRAS3O95661 229 aa16.78■□□□□ 0.28
SMPD1-210ENST00000534405 MYF5P13349 255 aa16.78■□□□□ 0.28
SMPD1-210ENST00000534405 HLA-DOBP13765 273 aa16.78■□□□□ 0.28
SMPD1-210ENST00000534405 PI3P19957 117 aa16.78■□□□□ 0.28
SMPD1-210ENST00000534405 RAP1BP61224 184 aa16.78■□□□□ 0.28
SMPD1-210ENST00000534405 DCAF7P61962 342 aa16.78■□□□□ 0.28
SMPD1-210ENST00000534405 OR5I1Q13606 314 aa16.78■□□□□ 0.28
SMPD1-210ENST00000534405 ICAM4Q14773 271 aa16.78■□□□□ 0.28
SMPD1-210ENST00000534405 C16orf47Q6ZP98 133 aaPredicted RBP16.78■□□□□ 0.28
SMPD1-210ENST00000534405 SHISA6Q6ZSJ9 500 aa16.78■□□□□ 0.28
SMPD1-210ENST00000534405 ASB5Q8WWX0 329 aa16.78■□□□□ 0.28
SMPD1-210ENST00000534405 FAM122AQ96E09 287 aa16.78■□□□□ 0.28
SMPD1-210ENST00000534405 VN1R1Q9GZP7 353 aa16.78■□□□□ 0.28
SMPD1-210ENST00000534405 RHBDD3Q9Y3P4 386 aa16.78■□□□□ 0.28
SMPD1-210ENST00000534405 ETV2O00321 342 aaPredicted RBP16.77■□□□□ 0.28
SMPD1-210ENST00000534405 MT-ATP6P00846 226 aa16.77■□□□□ 0.28
SMPD1-210ENST00000534405 HNF1AP20823 631 aa16.77■□□□□ 0.28
SMPD1-210ENST00000534405 C1orf140Q5VVS0 124 aa16.77■□□□□ 0.28
SMPD1-210ENST00000534405 TMEM182Q6ZP80 229 aaPredicted RBP16.77■□□□□ 0.28
SMPD1-210ENST00000534405 GPR119Q8TDV5 335 aa16.77■□□□□ 0.28
SMPD1-210ENST00000534405 TXNIPQ9H3M7 391 aa16.77■□□□□ 0.28
SMPD1-210ENST00000534405 ANAPC10Q9UM13 185 aa16.77■□□□□ 0.28
SMPD1-210ENST00000534405 WSB1Q9Y6I7 421 aa16.77■□□□□ 0.28
SMPD1-210ENST00000534405 OPN1MWP04001 364 aa16.77■□□□□ 0.27
SMPD1-210ENST00000534405 OPN1MW2P0DN77 364 aa16.77■□□□□ 0.27
SMPD1-210ENST00000534405 OPN1MW3P0DN78 364 aa16.77■□□□□ 0.27
SMPD1-210ENST00000534405 FBLP22087 321 aaKnown RBP16.77■□□□□ 0.27
SMPD1-210ENST00000534405 ZNF506Q5JVG8 444 aa16.77■□□□□ 0.27
SMPD1-210ENST00000534405 SLC18B1Q6NT16 456 aa16.77■□□□□ 0.27
SMPD1-210ENST00000534405 LYPD6Q86Y78 171 aa16.77■□□□□ 0.27
SMPD1-210ENST00000534405 WDFY1Q8IWB7 410 aa16.77■□□□□ 0.27
SMPD1-210ENST00000534405 ZNF441Q8N8Z8 693 aa16.77■□□□□ 0.27
SMPD1-210ENST00000534405 DAZLQ92904 295 aaKnown RBP16.77■□□□□ 0.27
SMPD1-210ENST00000534405 ABHD6Q9BV23 337 aa16.77■□□□□ 0.27
SMPD1-210ENST00000534405 IGHV1OR21-1A0A087WYE8 117 aa16.76■□□□□ 0.27
SMPD1-210ENST00000534405 PLPP3O14495 311 aa16.76■□□□□ 0.27
SMPD1-210ENST00000534405 OR6A2O95222 327 aa16.76■□□□□ 0.27
SMPD1-210ENST00000534405 CYB5R3P00387 301 aaPredicted RBP16.76■□□□□ 0.27
SMPD1-210ENST00000534405 SGPP2Q8IWX5 399 aa16.76■□□□□ 0.27
SMPD1-210ENST00000534405 OSGIN2Q9Y236 505 aa16.76■□□□□ 0.27
SMPD1-210ENST00000534405 LSM5Q9Y4Y9 91 aaKnown RBP16.76■□□□□ 0.27
SMPD1-210ENST00000534405 LIPGQ9Y5X9 500 aa16.76■□□□□ 0.27
SMPD1-210ENST00000534405 IGHV3-20A0A0C4DH32 117 aa16.76■□□□□ 0.27
SMPD1-210ENST00000534405 E5RGE8 158 aa16.76■□□□□ 0.27
SMPD1-210ENST00000534405 NXPH2O95156 264 aa16.76■□□□□ 0.27
SMPD1-210ENST00000534405 ARL4DP49703 201 aa16.76■□□□□ 0.27
SMPD1-210ENST00000534405 ROM1Q03395 351 aa16.76■□□□□ 0.27
SMPD1-210ENST00000534405 SP5Q6BEB4 398 aaPredicted RBP16.76■□□□□ 0.27
SMPD1-210ENST00000534405 MRPL41Q8IXM3 137 aaKnown RBP16.76■□□□□ 0.27
SMPD1-210ENST00000534405 NKAIN3Q8N8D7 197 aa16.76■□□□□ 0.27
SMPD1-210ENST00000534405 OR4D6Q8NGJ1 314 aa16.76■□□□□ 0.27
SMPD1-210ENST00000534405 MSL2Q9HCI7 577 aa16.76■□□□□ 0.27
SMPD1-210ENST00000534405 COA3Q9Y2R0 106 aaPredicted RBP16.76■□□□□ 0.27
SMPD1-210ENST00000534405 NSG2Q9Y328 171 aa16.76■□□□□ 0.27
SMPD1-210ENST00000534405 LRP12Q9Y561 859 aa16.76■□□□□ 0.27
SMPD1-210ENST00000534405 A0A1B0GU03 582 aa16.75■□□□□ 0.27
SMPD1-210ENST00000534405 C2orf72A6NCS6 295 aa16.75■□□□□ 0.27
SMPD1-210ENST00000534405 A8MVM7 634 aa16.75■□□□□ 0.27
SMPD1-210ENST00000534405 GPR137BO60478 399 aa16.75■□□□□ 0.27
SMPD1-210ENST00000534405 GNB3P16520 340 aa16.75■□□□□ 0.27
SMPD1-210ENST00000534405 PMS2P11Q13670 270 aa16.75■□□□□ 0.27
SMPD1-210ENST00000534405 LEMD1Q68G75 181 aa16.75■□□□□ 0.27
SMPD1-210ENST00000534405 DEGS2Q6QHC5 323 aa16.75■□□□□ 0.27
SMPD1-210ENST00000534405 SSX7Q7RTT5 188 aa16.75■□□□□ 0.27
SMPD1-210ENST00000534405 IFI44Q8TCB0 444 aa16.75■□□□□ 0.27
SMPD1-210ENST00000534405 STT3BQ8TCJ2 826 aa16.75■□□□□ 0.27
SMPD1-210ENST00000534405 RHBDD1Q8TEB9 315 aa16.75■□□□□ 0.27
SMPD1-210ENST00000534405 FGGYQ96C11 551 aa16.75■□□□□ 0.27
SMPD1-210ENST00000534405 OR2J1Q9GZK6 312 aa16.75■□□□□ 0.27
SMPD1-210ENST00000534405 C1orf123Q9NWV4 160 aa16.75■□□□□ 0.27
SMPD1-210ENST00000534405 FKBP11Q9NYL4 201 aa16.75■□□□□ 0.27
SMPD1-210ENST00000534405 COPS7AQ9UBW8 275 aa16.75■□□□□ 0.27
SMPD1-210ENST00000534405 KIF26BQ2KJY2 2108 aa16.75■□□□□ 0.27
SMPD1-210ENST00000534405 K7EP13 123 aa16.75■□□□□ 0.27
SMPD1-210ENST00000534405 HPRT1P00492 218 aa16.75■□□□□ 0.27
SMPD1-210ENST00000534405 MDKP21741 143 aaPredicted RBP16.75■□□□□ 0.27
SMPD1-210ENST00000534405 PNRC1Q12796 327 aaPredicted RBP16.75■□□□□ 0.27
SMPD1-210ENST00000534405 LHFPL1Q86WI0 220 aa16.75■□□□□ 0.27
SMPD1-210ENST00000534405 SLC26A10Q8NG04 563 aa16.75■□□□□ 0.27
SMPD1-210ENST00000534405 SLC25A44Q96H78 314 aaPredicted RBP16.75■□□□□ 0.27
SMPD1-210ENST00000534405 NUDT16L1Q9BRJ7 211 aaKnown RBP16.75■□□□□ 0.27
SMPD1-210ENST00000534405 CABLES2Q9BTV7 478 aa16.75■□□□□ 0.27
SMPD1-210ENST00000534405 CBR3O75828 277 aa16.74■□□□□ 0.27
SMPD1-210ENST00000534405 SCGNO76038 276 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms