RNA–Protein interactions for RNA: ENST00000533690.5

ATM-221, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 3,354 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-221ENST00000533690 CALHM2Q9HA72 323 aa3.36□□□□□ -1.87
ATM-221ENST00000533690 TMEM38BQ9NVV0 291 aa3.36□□□□□ -1.87
ATM-221ENST00000533690 DKK4Q9UBT3 224 aa3.36□□□□□ -1.87
ATM-221ENST00000533690 GAB2Q9UQC2 676 aa3.36□□□□□ -1.87
ATM-221ENST00000533690 LAMA3Q16787 3333 aa3.36□□□□□ -1.87
ATM-221ENST00000533690 GTF3C1Q12789 2109 aa3.36□□□□□ -1.87
ATM-221ENST00000533690 RAI1Q7Z5J4 1906 aaPredicted RBP3.36□□□□□ -1.87
ATM-221ENST00000533690 METTL21EPA6NDL7 271 aa3.35□□□□□ -1.87
ATM-221ENST00000533690 FAM90A9PA6NNJ1 464 aa3.35□□□□□ -1.87
ATM-221ENST00000533690 B4DEV8 164 aa3.35□□□□□ -1.87
ATM-221ENST00000533690 RPP14O95059 124 aaKnown RBP3.35□□□□□ -1.87
ATM-221ENST00000533690 ARG1P05089 322 aa3.35□□□□□ -1.87
ATM-221ENST00000533690 PET100P0DJ07 73 aa3.35□□□□□ -1.87
ATM-221ENST00000533690 SRFP11831 508 aa3.35□□□□□ -1.87
ATM-221ENST00000533690 CBR1P16152 277 aa3.35□□□□□ -1.87
ATM-221ENST00000533690 FBLP22087 321 aaKnown RBP3.35□□□□□ -1.87
ATM-221ENST00000533690 GLRA1P23415 457 aa3.35□□□□□ -1.87
ATM-221ENST00000533690 RPL4P36578 427 aaKnown RBP3.35□□□□□ -1.87
ATM-221ENST00000533690 GLIPR1P48060 266 aa3.35□□□□□ -1.87
ATM-221ENST00000533690 TNFSF10P50591 281 aa3.35□□□□□ -1.87
ATM-221ENST00000533690 PLCXD2Q0VAA5 305 aa3.35□□□□□ -1.87
ATM-221ENST00000533690 PDCD1Q15116 288 aa3.35□□□□□ -1.87
ATM-221ENST00000533690 SHHQ15465 462 aa3.35□□□□□ -1.87
ATM-221ENST00000533690 CCDC157Q569K6 752 aa3.35□□□□□ -1.87
ATM-221ENST00000533690 SAMD5Q5TGI4 173 aa3.35□□□□□ -1.87
ATM-221ENST00000533690 PLXDC2Q6UX71 529 aa3.35□□□□□ -1.87
ATM-221ENST00000533690 TMEM14EPQ6UXP3 125 aa3.35□□□□□ -1.87
ATM-221ENST00000533690 LFNGQ8NES3 379 aa3.35□□□□□ -1.87
ATM-221ENST00000533690 OR51E1Q8TCB6 317 aa3.35□□□□□ -1.87
ATM-221ENST00000533690 PHOSPHO1Q8TCT1 267 aa3.35□□□□□ -1.87
ATM-221ENST00000533690 TP53RKQ96S44 253 aa3.35□□□□□ -1.87
ATM-221ENST00000533690 RASL10BQ96S79 203 aa3.35□□□□□ -1.87
ATM-221ENST00000533690 C2orf88Q9BSF0 95 aa3.35□□□□□ -1.87
ATM-221ENST00000533690 BCO1Q9HAY6 547 aa3.35□□□□□ -1.87
ATM-221ENST00000533690 TAF9BQ9HBM6 251 aa3.35□□□□□ -1.87
ATM-221ENST00000533690 SMCO4Q9NRQ5 59 aa3.35□□□□□ -1.87
ATM-221ENST00000533690 CKLFQ9UBR5 152 aa3.35□□□□□ -1.87
ATM-221ENST00000533690 UBE2J1Q9Y385 318 aaPredicted RBP3.35□□□□□ -1.87
ATM-221ENST00000533690 IGHV5-10-1A0A0J9YXX1 117 aa3.35□□□□□ -1.87
ATM-221ENST00000533690 A0A1B0GW55 424 aa3.35□□□□□ -1.87
ATM-221ENST00000533690 A0A1W2PQM1 296 aa3.35□□□□□ -1.87
ATM-221ENST00000533690 ZFP92A6NM28 416 aa3.35□□□□□ -1.87
ATM-221ENST00000533690 TMPRSS2O15393 492 aa3.35□□□□□ -1.87
ATM-221ENST00000533690 SLC31A1O15431 190 aa3.35□□□□□ -1.87
ATM-221ENST00000533690 FABP1P07148 127 aa3.35□□□□□ -1.87
ATM-221ENST00000533690 PFN1P07737 140 aaKnown RBP3.35□□□□□ -1.87
ATM-221ENST00000533690 DBHP09172 617 aa3.35□□□□□ -1.87
ATM-221ENST00000533690 DUX4L2P0CJ85 424 aa3.35□□□□□ -1.87
ATM-221ENST00000533690 DUX4L3P0CJ86 424 aa3.35□□□□□ -1.87
ATM-221ENST00000533690 DUX4L4P0CJ87 422 aa3.35□□□□□ -1.87
ATM-221ENST00000533690 DUX4L5P0CJ88 424 aa3.35□□□□□ -1.87
ATM-221ENST00000533690 DUX4L6P0CJ89 424 aa3.35□□□□□ -1.87
ATM-221ENST00000533690 DUX4L7P0CJ90 424 aa3.35□□□□□ -1.87
ATM-221ENST00000533690 MSR1P21757 451 aa3.35□□□□□ -1.87
ATM-221ENST00000533690 RPL12P30050 165 aaKnown RBP3.35□□□□□ -1.87
ATM-221ENST00000533690 EIF2S3P41091 472 aaKnown RBP3.35□□□□□ -1.87
ATM-221ENST00000533690 CDX1P47902 265 aaPredicted RBP3.35□□□□□ -1.87
ATM-221ENST00000533690 NPY4RP50391 375 aa3.35□□□□□ -1.87
ATM-221ENST00000533690 TMEM33P57088 247 aa3.35□□□□□ -1.87
ATM-221ENST00000533690 OR1D5P58170 312 aa3.35□□□□□ -1.87
ATM-221ENST00000533690 LINC00310P59036 64 aa3.35□□□□□ -1.87
ATM-221ENST00000533690 SSTP61278 116 aa3.35□□□□□ -1.87
ATM-221ENST00000533690 RPL15P61313 204 aaKnown RBP3.35□□□□□ -1.87
ATM-221ENST00000533690 HAGHQ16775 308 aa3.35□□□□□ -1.87
ATM-221ENST00000533690 WDR25Q64LD2 544 aaPredicted RBP3.35□□□□□ -1.87
ATM-221ENST00000533690 SPNS3Q6ZMD2 512 aa3.35□□□□□ -1.87
ATM-221ENST00000533690 ZNF101Q8IZC7 436 aa3.35□□□□□ -1.87
ATM-221ENST00000533690 OR2C3Q8N628 320 aa3.35□□□□□ -1.87
ATM-221ENST00000533690 SEMA6DQ8NFY4 1073 aa3.35□□□□□ -1.87
ATM-221ENST00000533690 OR52M1Q8NGK5 317 aa3.35□□□□□ -1.87
ATM-221ENST00000533690 METTL21AQ8WXB1 218 aa3.35□□□□□ -1.87
ATM-221ENST00000533690 MMABQ96EY8 250 aaPredicted RBP3.35□□□□□ -1.87
ATM-221ENST00000533690 ACTR3CQ9C0K3 210 aaPredicted RBP3.35□□□□□ -1.87
ATM-221ENST00000533690 PPP1R14DQ9NXH3 145 aa3.35□□□□□ -1.87
ATM-221ENST00000533690 DUX4Q9UBX2 424 aa3.35□□□□□ -1.87
ATM-221ENST00000533690 WASF3Q9UPY6 502 aa3.35□□□□□ -1.87
ATM-221ENST00000533690 VDAC3Q9Y277 283 aa3.35□□□□□ -1.87
ATM-221ENST00000533690 POLR3KQ9Y2Y1 108 aaPredicted RBP3.35□□□□□ -1.87
ATM-221ENST00000533690 A0A1B0GU03 582 aa3.35□□□□□ -1.87
ATM-221ENST00000533690 MEIS3P1A6NDR6 274 aa3.35□□□□□ -1.87
ATM-221ENST00000533690 ZNF503-AS2A6NEH8 195 aa3.35□□□□□ -1.87
ATM-221ENST00000533690 TNFSF11O14788 317 aa3.35□□□□□ -1.87
ATM-221ENST00000533690 VAMP5O95183 116 aa3.35□□□□□ -1.87
ATM-221ENST00000533690 CD2P06729 351 aa3.35□□□□□ -1.87
ATM-221ENST00000533690 DCNP07585 359 aaKnown RBP3.35□□□□□ -1.87
ATM-221ENST00000533690 SP1P08047 785 aa3.35□□□□□ -1.87
ATM-221ENST00000533690 CXCL1P09341 107 aa3.35□□□□□ -1.87
ATM-221ENST00000533690 LHX2P50458 406 aa3.35□□□□□ -1.87
ATM-221ENST00000533690 ARHGDIBP52566 201 aa3.35□□□□□ -1.87
ATM-221ENST00000533690 EMP2P54851 167 aa3.35□□□□□ -1.87
ATM-221ENST00000533690 BIDP55957 195 aa3.35□□□□□ -1.87
ATM-221ENST00000533690 DSCR4P56555 118 aaPredicted RBP3.35□□□□□ -1.87
ATM-221ENST00000533690 EWSR1Q01844 656 aaKnown RBP eCLIP3.35□□□□□ -1.87
ATM-221ENST00000533690 CLINT1Q14677 625 aa3.35□□□□□ -1.87
ATM-221ENST00000533690 BSXQ3C1V8 233 aa3.35□□□□□ -1.87
ATM-221ENST00000533690 AWAT1Q58HT5 328 aa3.35□□□□□ -1.87
ATM-221ENST00000533690 ARMC6Q6NXE6 501 aa3.35□□□□□ -1.87
ATM-221ENST00000533690 RBMS3Q6XE24 437 aaKnown RBP3.35□□□□□ -1.87
ATM-221ENST00000533690 ETV3LQ6ZN32 361 aa3.35□□□□□ -1.87
ATM-221ENST00000533690 CPEB2Q7Z5Q1 589 aaKnown RBP3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms