RNA–Protein interactions for RNA: ENST00000533129.5

CAPN1-224, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CAPN1, Length 2,792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-224ENST00000533129 RCL1Q9Y2P8 373 aaKnown RBP12.88□□□□□ -0.35
CAPN1-224ENST00000533129 U3KQA8 63 aa12.88□□□□□ -0.35
CAPN1-224ENST00000533129 H3BML4 177 aa12.88□□□□□ -0.35
CAPN1-224ENST00000533129 MSTNO14793 375 aa12.88□□□□□ -0.35
CAPN1-224ENST00000533129 PPP1R2P9O14990 202 aa12.88□□□□□ -0.35
CAPN1-224ENST00000533129 CTSSP25774 331 aa12.88□□□□□ -0.35
CAPN1-224ENST00000533129 EWSR1Q01844 656 aaKnown RBP eCLIP12.88□□□□□ -0.35
CAPN1-224ENST00000533129 UBE2V2Q15819 145 aa12.88□□□□□ -0.35
CAPN1-224ENST00000533129 SPNS3Q6ZMD2 512 aa12.88□□□□□ -0.35
CAPN1-224ENST00000533129 LGI3Q8N145 548 aa12.88□□□□□ -0.35
CAPN1-224ENST00000533129 HIST3H2BBQ8N257 126 aa12.88□□□□□ -0.35
CAPN1-224ENST00000533129 ADPRHL1Q8NDY3 354 aa12.88□□□□□ -0.35
CAPN1-224ENST00000533129 NAT6Q93015 286 aa12.88□□□□□ -0.35
CAPN1-224ENST00000533129 TOMM40LQ969M1 308 aa12.88□□□□□ -0.35
CAPN1-224ENST00000533129 LIN37Q96GY3 246 aaPredicted RBP12.88□□□□□ -0.35
CAPN1-224ENST00000533129 LYZL4Q96KX0 146 aa12.88□□□□□ -0.35
CAPN1-224ENST00000533129 Q96M66 194 aa12.88□□□□□ -0.35
CAPN1-224ENST00000533129 HDHD3Q9BSH5 251 aaPredicted RBP12.88□□□□□ -0.35
CAPN1-224ENST00000533129 HSF4Q9ULV5 492 aa12.88□□□□□ -0.35
CAPN1-224ENST00000533129 VDAC3Q9Y277 283 aa12.88□□□□□ -0.35
CAPN1-224ENST00000533129 RP1P56715 2156 aa12.87□□□□□ -0.35
CAPN1-224ENST00000533129 FCGR2AP12318 317 aa12.87□□□□□ -0.35
CAPN1-224ENST00000533129 GABRR1P24046 479 aa12.87□□□□□ -0.35
CAPN1-224ENST00000533129 SFTPDP35247 375 aa12.87□□□□□ -0.35
CAPN1-224ENST00000533129 RND3P61587 244 aa12.87□□□□□ -0.35
CAPN1-224ENST00000533129 CCL20P78556 96 aa12.87□□□□□ -0.35
CAPN1-224ENST00000533129 DMRTC1Q5HYR2 192 aa12.87□□□□□ -0.35
CAPN1-224ENST00000533129 ZNF501Q96CX3 271 aaPredicted RBP12.87□□□□□ -0.35
CAPN1-224ENST00000533129 MSI2Q96DH6 328 aaKnown RBP12.87□□□□□ -0.35
CAPN1-224ENST00000533129 PGAM5Q96HS1 289 aa12.87□□□□□ -0.35
CAPN1-224ENST00000533129 ELL3Q9HB65 397 aaPredicted RBP12.87□□□□□ -0.35
CAPN1-224ENST00000533129 V9GYS6 101 aa12.87□□□□□ -0.35
CAPN1-224ENST00000533129 C2orf72A6NCS6 295 aa12.87□□□□□ -0.35
CAPN1-224ENST00000533129 E9PLN8 166 aa12.87□□□□□ -0.35
CAPN1-224ENST00000533129 ETV2O00321 342 aaPredicted RBP12.87□□□□□ -0.35
CAPN1-224ENST00000533129 ST8SIA5O15466 376 aa12.87□□□□□ -0.35
CAPN1-224ENST00000533129 CER1O95813 267 aa12.87□□□□□ -0.35
CAPN1-224ENST00000533129 IFNA10P01566 189 aa12.87□□□□□ -0.35
CAPN1-224ENST00000533129 DTYMKP23919 212 aa12.87□□□□□ -0.35
CAPN1-224ENST00000533129 CSNK1A1P48729 337 aa12.87□□□□□ -0.35
CAPN1-224ENST00000533129 ERVFRD-1P60508 538 aa12.87□□□□□ -0.35
CAPN1-224ENST00000533129 DLK1P80370 383 aa12.87□□□□□ -0.35
CAPN1-224ENST00000533129 GNMTQ14749 295 aa12.87□□□□□ -0.35
CAPN1-224ENST00000533129 ZNF343Q6P1L6 599 aa12.87□□□□□ -0.35
CAPN1-224ENST00000533129 REC114Q7Z4M0 266 aa12.87□□□□□ -0.35
CAPN1-224ENST00000533129 OR2G3Q8NGZ4 309 aa12.87□□□□□ -0.35
CAPN1-224ENST00000533129 CPNE4Q96A23 557 aaPredicted RBP12.87□□□□□ -0.35
CAPN1-224ENST00000533129 FGF21Q9NSA1 209 aa12.87□□□□□ -0.35
CAPN1-224ENST00000533129 CACNA1EQ15878 2313 aa12.87□□□□□ -0.35
CAPN1-224ENST00000533129 DHRS3O75911 302 aa12.86□□□□□ -0.35
CAPN1-224ENST00000533129 NKX6-1P78426 367 aaPredicted RBP12.86□□□□□ -0.35
CAPN1-224ENST00000533129 MYBPHQ13203 477 aa12.86□□□□□ -0.35
CAPN1-224ENST00000533129 SSX9Q7RTT3 188 aa12.86□□□□□ -0.35
CAPN1-224ENST00000533129 OR4D5Q8NGN0 318 aa12.86□□□□□ -0.35
CAPN1-224ENST00000533129 OR14L1PQ8NHC6 308 aa12.86□□□□□ -0.35
CAPN1-224ENST00000533129 S100PBPQ96BU1 408 aa12.86□□□□□ -0.35
CAPN1-224ENST00000533129 TVP23CQ96ET8 276 aa12.86□□□□□ -0.35
CAPN1-224ENST00000533129 PIGQQ9BRB3 760 aa12.86□□□□□ -0.35
CAPN1-224ENST00000533129 SLC2A9Q9NRM0 540 aa12.86□□□□□ -0.35
CAPN1-224ENST00000533129 PCDH15Q96QU1 1955 aa12.86□□□□□ -0.35
CAPN1-224ENST00000533129 A0A0U1RQV5 110 aa12.86□□□□□ -0.35
CAPN1-224ENST00000533129 ZNF850A8MQ14 1090 aa12.86□□□□□ -0.35
CAPN1-224ENST00000533129 TRAF3IP2O43734 574 aaPredicted RBP12.86□□□□□ -0.35
CAPN1-224ENST00000533129 PITX3O75364 302 aa12.86□□□□□ -0.35
CAPN1-224ENST00000533129 HSPB1P04792 205 aaKnown RBP12.86□□□□□ -0.35
CAPN1-224ENST00000533129 FBLP22087 321 aaKnown RBP12.86□□□□□ -0.35
CAPN1-224ENST00000533129 ATP6V0CP27449 155 aa12.86□□□□□ -0.35
CAPN1-224ENST00000533129 PKIAP61925 76 aa12.86□□□□□ -0.35
CAPN1-224ENST00000533129 HIST2H3PS2Q5TEC6 136 aa12.86□□□□□ -0.35
CAPN1-224ENST00000533129 SP5Q6BEB4 398 aaPredicted RBP12.86□□□□□ -0.35
CAPN1-224ENST00000533129 ZNF429Q86V71 674 aa12.86□□□□□ -0.35
CAPN1-224ENST00000533129 FBXL14Q8N1E6 418 aa12.86□□□□□ -0.35
CAPN1-224ENST00000533129 OR6X1Q8NH79 312 aa12.86□□□□□ -0.35
CAPN1-224ENST00000533129 RHOVQ96L33 236 aa12.86□□□□□ -0.35
CAPN1-224ENST00000533129 ANGPTL4Q9BY76 406 aa12.86□□□□□ -0.35
CAPN1-224ENST00000533129 C11orf1Q9H5F2 150 aa12.86□□□□□ -0.35
CAPN1-224ENST00000533129 COL6A3P12111 3177 aa12.86□□□□□ -0.35
CAPN1-224ENST00000533129 A0A1B0GX78 115 aa12.86□□□□□ -0.35
CAPN1-224ENST00000533129 ZNF724A8MTY0 619 aa12.86□□□□□ -0.35
CAPN1-224ENST00000533129 H0YL77 283 aa12.86□□□□□ -0.35
CAPN1-224ENST00000533129 SOD3P08294 240 aa12.86□□□□□ -0.35
CAPN1-224ENST00000533129 GLIPR1P48060 266 aa12.86□□□□□ -0.35
CAPN1-224ENST00000533129 RSU1Q15404 277 aa12.86□□□□□ -0.35
CAPN1-224ENST00000533129 HAGHQ16775 308 aa12.86□□□□□ -0.35
CAPN1-224ENST00000533129 TMEM176BQ3YBM2 270 aaPredicted RBP12.86□□□□□ -0.35
CAPN1-224ENST00000533129 KHDC3LQ587J8 217 aa12.86□□□□□ -0.35
CAPN1-224ENST00000533129 SLC23A3Q6PIS1 610 aa12.86□□□□□ -0.35
CAPN1-224ENST00000533129 SLC35E3Q7Z769 313 aa12.86□□□□□ -0.35
CAPN1-224ENST00000533129 OR2C3Q8N628 320 aa12.86□□□□□ -0.35
CAPN1-224ENST00000533129 NIPSNAP3BQ9BS92 247 aa12.86□□□□□ -0.35
CAPN1-224ENST00000533129 AK3Q9UIJ7 227 aa12.86□□□□□ -0.35
CAPN1-224ENST00000533129 HS3ST3B1Q9Y662 390 aa12.86□□□□□ -0.35
CAPN1-224ENST00000533129 TECTAO75443 2155 aa12.86□□□□□ -0.35
CAPN1-224ENST00000533129 FAM230AA0A1W2PPH8 454 aa12.85□□□□□ -0.35
CAPN1-224ENST00000533129 C5orf63A6NC05 138 aa12.85□□□□□ -0.35
CAPN1-224ENST00000533129 PTBP3O95758 552 aaKnown RBP12.85□□□□□ -0.35
CAPN1-224ENST00000533129 KLK2P20151 261 aa12.85□□□□□ -0.35
CAPN1-224ENST00000533129 FBXW4P57775 412 aa12.85□□□□□ -0.35
CAPN1-224ENST00000533129 RNF4P78317 190 aa12.85□□□□□ -0.35
CAPN1-224ENST00000533129 ZNF506Q5JVG8 444 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms