RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 ZDHHC23Q8IYP9 409 aa15.74■□□□□ 0.11
SMPD1-208ENST00000533123 BATF2Q8N1L9 274 aa15.74■□□□□ 0.11
SMPD1-208ENST00000533123 FAM222BQ8WU58 562 aa15.74■□□□□ 0.11
SMPD1-208ENST00000533123 MRPL37Q9BZE1 423 aaKnown RBP15.74■□□□□ 0.11
SMPD1-208ENST00000533123 ZNF581Q9P0T4 197 aa15.74■□□□□ 0.11
SMPD1-208ENST00000533123 A0A0A6YYJ9 748 aa15.73■□□□□ 0.11
SMPD1-208ENST00000533123 FOXI3A8MTJ6 420 aaPredicted RBP15.73■□□□□ 0.11
SMPD1-208ENST00000533123 E7EQL1 145 aa15.73■□□□□ 0.11
SMPD1-208ENST00000533123 H2AFB2P0C5Z0 115 aa15.73■□□□□ 0.11
SMPD1-208ENST00000533123 AKAIN1P0CW23 69 aa15.73■□□□□ 0.11
SMPD1-208ENST00000533123 GABRR1P24046 479 aa15.73■□□□□ 0.11
SMPD1-208ENST00000533123 KLF3P57682 345 aaPredicted RBP15.73■□□□□ 0.11
SMPD1-208ENST00000533123 STEAP1BQ6NZ63 245 aa15.73■□□□□ 0.11
SMPD1-208ENST00000533123 SUN5Q8TC36 379 aa15.73■□□□□ 0.11
SMPD1-208ENST00000533123 TM2D1Q9BX74 207 aa15.73■□□□□ 0.11
SMPD1-208ENST00000533123 PQLC2LA1A4F0 135 aa15.72■□□□□ 0.11
SMPD1-208ENST00000533123 MFNGO00587 321 aa15.72■□□□□ 0.11
SMPD1-208ENST00000533123 CYB5AP00167 134 aa15.72■□□□□ 0.11
SMPD1-208ENST00000533123 BLVRBP30043 206 aaPredicted RBP15.72■□□□□ 0.11
SMPD1-208ENST00000533123 FAUP35544 74 aaKnown RBP15.72■□□□□ 0.11
SMPD1-208ENST00000533123 TAS2R19P59542 299 aa15.72■□□□□ 0.11
SMPD1-208ENST00000533123 ADIPOQQ15848 244 aa15.72■□□□□ 0.11
SMPD1-208ENST00000533123 OR52W1Q6IF63 320 aa15.72■□□□□ 0.11
SMPD1-208ENST00000533123 ZNF782Q6ZMW2 699 aaPredicted RBP15.72■□□□□ 0.11
SMPD1-208ENST00000533123 MRPL24Q96A35 216 aaKnown RBP15.72■□□□□ 0.11
SMPD1-208ENST00000533123 TINAGL1Q9GZM7 467 aaPredicted RBP15.72■□□□□ 0.11
SMPD1-208ENST00000533123 ZNF442Q9H7R0 627 aa15.72■□□□□ 0.11
SMPD1-208ENST00000533123 HSPB11Q9Y547 144 aa15.72■□□□□ 0.11
SMPD1-208ENST00000533123 IGHV3-13P01766 116 aa15.72■□□□□ 0.11
SMPD1-208ENST00000533123 SFTPBP07988 381 aa15.72■□□□□ 0.11
SMPD1-208ENST00000533123 OR4A8P0C604 315 aa15.72■□□□□ 0.11
SMPD1-208ENST00000533123 MAB21L1Q13394 359 aa15.72■□□□□ 0.11
SMPD1-208ENST00000533123 CEACAM21Q3KPI0 293 aa15.72■□□□□ 0.11
SMPD1-208ENST00000533123 ASCL4Q6XD76 172 aa15.72■□□□□ 0.11
SMPD1-208ENST00000533123 SLC25A26Q70HW3 274 aa15.72■□□□□ 0.11
SMPD1-208ENST00000533123 ZNF611Q8N823 705 aa15.72■□□□□ 0.11
SMPD1-208ENST00000533123 TMEM229BQ8NBD8 167 aa15.72■□□□□ 0.11
SMPD1-208ENST00000533123 OR8G5Q8NG78 346 aa15.72■□□□□ 0.11
SMPD1-208ENST00000533123 OR51S1Q8NGJ8 323 aa15.72■□□□□ 0.11
SMPD1-208ENST00000533123 LILRB1Q8NHL6 650 aaPredicted RBP15.72■□□□□ 0.11
SMPD1-208ENST00000533123 Q96M66 194 aa15.72■□□□□ 0.11
SMPD1-208ENST00000533123 MSL2Q9HCI7 577 aa15.72■□□□□ 0.11
SMPD1-208ENST00000533123 USP9YO00507 2555 aaPredicted RBP15.72■□□□□ 0.11
SMPD1-208ENST00000533123 IGLV3-9A0A075B6K5 115 aa15.71■□□□□ 0.11
SMPD1-208ENST00000533123 A1L4Q6 167 aa15.71■□□□□ 0.11
SMPD1-208ENST00000533123 ARPC1BO15143 372 aaKnown RBP15.71■□□□□ 0.11
SMPD1-208ENST00000533123 DHFRP00374 187 aa15.71■□□□□ 0.11
SMPD1-208ENST00000533123 CSTBP04080 98 aaKnown RBP15.71■□□□□ 0.11
SMPD1-208ENST00000533123 CPT2P23786 658 aa15.71■□□□□ 0.11
SMPD1-208ENST00000533123 OR51F2Q8NH61 342 aa15.71■□□□□ 0.11
SMPD1-208ENST00000533123 TMEM204Q9BSN7 226 aa15.71■□□□□ 0.11
SMPD1-208ENST00000533123 CLEC18AA5D8T8 446 aa15.71■□□□□ 0.1
SMPD1-208ENST00000533123 ZNF736B4DX44 427 aaPredicted RBP15.71■□□□□ 0.1
SMPD1-208ENST00000533123 RAB3DO95716 219 aa15.71■□□□□ 0.1
SMPD1-208ENST00000533123 GSTP1P09211 210 aaKnown RBP15.71■□□□□ 0.1
SMPD1-208ENST00000533123 FAM189A2Q15884 450 aa15.71■□□□□ 0.1
SMPD1-208ENST00000533123 PIGYQ3MUY2 71 aa15.71■□□□□ 0.1
SMPD1-208ENST00000533123 CLEC18BQ6UXF7 455 aa15.71■□□□□ 0.1
SMPD1-208ENST00000533123 Q6ZR03 302 aa15.71■□□□□ 0.1
SMPD1-208ENST00000533123 CLEC18CQ8NCF0 446 aa15.71■□□□□ 0.1
SMPD1-208ENST00000533123 BEST4Q8NFU0 473 aa15.71■□□□□ 0.1
SMPD1-208ENST00000533123 GIMAP1Q8WWP7 306 aa15.71■□□□□ 0.1
SMPD1-208ENST00000533123 TMEM100Q9NV29 134 aa15.71■□□□□ 0.1
SMPD1-208ENST00000533123 CISD1Q9NZ45 108 aaKnown RBP15.71■□□□□ 0.1
SMPD1-208ENST00000533123 MPC1Q9Y5U8 109 aa15.71■□□□□ 0.1
SMPD1-208ENST00000533123 CRYBG3Q68DQ2 2970 aa15.71■□□□□ 0.1
SMPD1-208ENST00000533123 ZNF732B4DXR9 585 aa15.7■□□□□ 0.1
SMPD1-208ENST00000533123 H0YL77 283 aa15.7■□□□□ 0.1
SMPD1-208ENST00000533123 NDUFB6O95139 128 aa15.7■□□□□ 0.1
SMPD1-208ENST00000533123 CLDN1O95832 211 aa15.7■□□□□ 0.1
SMPD1-208ENST00000533123 HAAOP46952 286 aa15.7■□□□□ 0.1
SMPD1-208ENST00000533123 SELENOVP59797 346 aa15.7■□□□□ 0.1
SMPD1-208ENST00000533123 TAF9Q16594 264 aa15.7■□□□□ 0.1
SMPD1-208ENST00000533123 GTF3AQ92664 365 aaKnown RBP15.7■□□□□ 0.1
SMPD1-208ENST00000533123 PECRQ9BY49 303 aa15.7■□□□□ 0.1
SMPD1-208ENST00000533123 PLK3Q9H4B4 646 aa15.7■□□□□ 0.1
SMPD1-208ENST00000533123 IFT46Q9NQC8 304 aa15.7■□□□□ 0.1
SMPD1-208ENST00000533123 TAAR3PQ9P1P4 343 aa15.7■□□□□ 0.1
SMPD1-208ENST00000533123 SLC23A1Q9UHI7 598 aa15.7■□□□□ 0.1
SMPD1-208ENST00000533123 CSN2P05814 226 aa15.7■□□□□ 0.1
SMPD1-208ENST00000533123 NPBWR2P48146 333 aa15.7■□□□□ 0.1
SMPD1-208ENST00000533123 NKAPLQ5M9Q1 402 aa15.7■□□□□ 0.1
SMPD1-208ENST00000533123 C6orf201Q7Z4U5 140 aa15.7■□□□□ 0.1
SMPD1-208ENST00000533123 CCDC28AQ8IWP9 274 aa15.7■□□□□ 0.1
SMPD1-208ENST00000533123 FBXL14Q8N1E6 418 aa15.7■□□□□ 0.1
SMPD1-208ENST00000533123 C9orf62Q8N4C0 152 aa15.7■□□□□ 0.1
SMPD1-208ENST00000533123 PXT1Q8NFP0 134 aa15.7■□□□□ 0.1
SMPD1-208ENST00000533123 OR10AD1Q8NGE0 317 aa15.7■□□□□ 0.1
SMPD1-208ENST00000533123 OR5P3Q8WZ94 311 aa15.7■□□□□ 0.1
SMPD1-208ENST00000533123 HIST1H2AAQ96QV6 131 aa15.7■□□□□ 0.1
SMPD1-208ENST00000533123 GHITMQ9H3K2 345 aa15.7■□□□□ 0.1
SMPD1-208ENST00000533123 C7orf66A4D0T2 115 aa15.69■□□□□ 0.1
SMPD1-208ENST00000533123 PEX14O75381 377 aa15.69■□□□□ 0.1
SMPD1-208ENST00000533123 SERPINF1P36955 418 aa15.69■□□□□ 0.1
SMPD1-208ENST00000533123 NKPD1Q17RQ9 610 aa15.69■□□□□ 0.1
SMPD1-208ENST00000533123 ZNF672Q499Z4 452 aaPredicted RBP15.69■□□□□ 0.1
SMPD1-208ENST00000533123 SLAMF9Q96A28 289 aa15.69■□□□□ 0.1
SMPD1-208ENST00000533123 HYLS1Q96M11 299 aa15.69■□□□□ 0.1
SMPD1-208ENST00000533123 GINS4Q9BRT9 223 aa15.69■□□□□ 0.1
SMPD1-208ENST00000533123 ADAT1Q9BUB4 502 aaKnown RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms