RNA–Protein interactions for RNA: ENST00000532791.5

FGFR1-238, Transcript of fibroblast growth factor receptor 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene FGFR1, Length 5,590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-238ENST00000532791 SCN7AQ01118 1682 aa17.3■□□□□ 0.36
FGFR1-238ENST00000532791 CDC34P49427 236 aaPredicted RBP17.3■□□□□ 0.36
FGFR1-238ENST00000532791 LYZP61626 148 aa17.3■□□□□ 0.36
FGFR1-238ENST00000532791 IL13RA2Q14627 380 aa17.3■□□□□ 0.36
FGFR1-238ENST00000532791 C3AR1Q16581 482 aa17.3■□□□□ 0.36
FGFR1-238ENST00000532791 RNASEKQ6P5S7 137 aaKnown RBP17.3■□□□□ 0.36
FGFR1-238ENST00000532791 ZNF788Q6ZQV5 615 aa17.3■□□□□ 0.36
FGFR1-238ENST00000532791 ADTRPQ96IZ2 230 aa17.3■□□□□ 0.36
FGFR1-238ENST00000532791 CDX2Q99626 313 aaPredicted RBP17.3■□□□□ 0.36
FGFR1-238ENST00000532791 NHSQ6T4R5 1651 aa17.3■□□□□ 0.36
FGFR1-238ENST00000532791 CCL4P13236 92 aa17.3■□□□□ 0.36
FGFR1-238ENST00000532791 FABP4P15090 132 aa17.3■□□□□ 0.36
FGFR1-238ENST00000532791 C1orf53Q5VUE5 145 aa17.3■□□□□ 0.36
FGFR1-238ENST00000532791 OR4S2Q8NH73 311 aa17.3■□□□□ 0.36
FGFR1-238ENST00000532791 NAT8BQ9UHF3 227 aa17.3■□□□□ 0.36
FGFR1-238ENST00000532791 TMPRSS2O15393 492 aa17.29■□□□□ 0.36
FGFR1-238ENST00000532791 RANP62826 216 aaKnown RBP17.29■□□□□ 0.36
FGFR1-238ENST00000532791 OR2C3Q8N628 320 aa17.29■□□□□ 0.36
FGFR1-238ENST00000532791 OR8B3Q8NGG8 313 aa17.29■□□□□ 0.36
FGFR1-238ENST00000532791 RND1Q92730 232 aa17.29■□□□□ 0.36
FGFR1-238ENST00000532791 OR8B2Q96RD0 313 aa17.29■□□□□ 0.36
FGFR1-238ENST00000532791 GALR1P47211 349 aa17.29■□□□□ 0.36
FGFR1-238ENST00000532791 MRPS11P82912 194 aaKnown RBP17.29■□□□□ 0.36
FGFR1-238ENST00000532791 FOXO1Q12778 655 aa17.29■□□□□ 0.36
FGFR1-238ENST00000532791 DPF1Q92782 380 aa17.29■□□□□ 0.36
FGFR1-238ENST00000532791 LIPT2A6NK58 231 aa17.29■□□□□ 0.36
FGFR1-238ENST00000532791 ZNF716A6NP11 495 aa17.29■□□□□ 0.36
FGFR1-238ENST00000532791 ACTL6AO96019 429 aa17.29■□□□□ 0.36
FGFR1-238ENST00000532791 TMEM241Q24JQ0 296 aa17.29■□□□□ 0.36
FGFR1-238ENST00000532791 MOGAT2Q3SYC2 334 aa17.29■□□□□ 0.36
FGFR1-238ENST00000532791 LIAT1Q6ZQX7 453 aa17.29■□□□□ 0.36
FGFR1-238ENST00000532791 TGIF2LXQ8IUE1 241 aa17.29■□□□□ 0.36
FGFR1-238ENST00000532791 PTP4A1Q93096 173 aa17.29■□□□□ 0.36
FGFR1-238ENST00000532791 SLC25A22Q9H936 323 aa17.29■□□□□ 0.36
FGFR1-238ENST00000532791 MRM2Q9UI43 246 aaKnown RBP17.29■□□□□ 0.36
FGFR1-238ENST00000532791 SPINK4O60575 86 aa17.29■□□□□ 0.36
FGFR1-238ENST00000532791 CD226Q15762 336 aa17.29■□□□□ 0.36
FGFR1-238ENST00000532791 RNF212Q495C1 297 aa17.29■□□□□ 0.36
FGFR1-238ENST00000532791 OR52L2PQ8NGH6 319 aa17.29■□□□□ 0.36
FGFR1-238ENST00000532791 OR8D4Q8NGM9 314 aa17.29■□□□□ 0.36
FGFR1-238ENST00000532791 LRP5O75197 1615 aa17.29■□□□□ 0.36
FGFR1-238ENST00000532791 TO15178 435 aa17.29■□□□□ 0.36
FGFR1-238ENST00000532791 ZNF737O75373 536 aa17.29■□□□□ 0.36
FGFR1-238ENST00000532791 RD3LP0DJH9 198 aa17.29■□□□□ 0.36
FGFR1-238ENST00000532791 ORM2P19652 201 aa17.29■□□□□ 0.36
FGFR1-238ENST00000532791 CSF2RBP32927 897 aa17.29■□□□□ 0.36
FGFR1-238ENST00000532791 GAMTQ14353 236 aa17.29■□□□□ 0.36
FGFR1-238ENST00000532791 WDR31Q8NA23 367 aa17.29■□□□□ 0.36
FGFR1-238ENST00000532791 MAP6Q96JE9 813 aa17.29■□□□□ 0.36
FGFR1-238ENST00000532791 SLC25A30Q5SVS4 291 aa17.28■□□□□ 0.36
FGFR1-238ENST00000532791 CLEC9AQ6UXN8 241 aa17.28■□□□□ 0.36
FGFR1-238ENST00000532791 SFTPA2Q8IWL1 248 aa17.28■□□□□ 0.36
FGFR1-238ENST00000532791 FER1L6Q2WGJ9 1857 aa17.28■□□□□ 0.36
FGFR1-238ENST00000532791 PNPP00491 289 aa17.28■□□□□ 0.36
FGFR1-238ENST00000532791 ZNF66Q6ZN08 573 aa17.28■□□□□ 0.36
FGFR1-238ENST00000532791 OR10G4Q8NGN3 311 aa17.28■□□□□ 0.36
FGFR1-238ENST00000532791 OR10G9Q8NGN4 311 aa17.28■□□□□ 0.36
FGFR1-238ENST00000532791 OR10G7Q8NGN6 311 aa17.28■□□□□ 0.36
FGFR1-238ENST00000532791 VSTM2AQ8TAG5 236 aa17.28■□□□□ 0.36
FGFR1-238ENST00000532791 GPR27Q9NS67 375 aa17.28■□□□□ 0.36
FGFR1-238ENST00000532791 TTC3P53804 2025 aa17.28■□□□□ 0.36
FGFR1-238ENST00000532791 C21orf140B9A014 251 aa17.28■□□□□ 0.36
FGFR1-238ENST00000532791 SLC6A1P30531 599 aa17.28■□□□□ 0.36
FGFR1-238ENST00000532791 MESTQ5EB52 335 aa17.28■□□□□ 0.36
FGFR1-238ENST00000532791 CLLU1Q5K131 121 aa17.28■□□□□ 0.36
FGFR1-238ENST00000532791 D2HGDHQ8N465 521 aa17.28■□□□□ 0.36
FGFR1-238ENST00000532791 GVQW1Q8N7I0 195 aa17.28■□□□□ 0.36
FGFR1-238ENST00000532791 CROCCQ5TZA2 2017 aa17.28■□□□□ 0.36
FGFR1-238ENST00000532791 MPC2O95563 127 aa17.28■□□□□ 0.36
FGFR1-238ENST00000532791 ATP6V1FQ16864 119 aa17.28■□□□□ 0.36
FGFR1-238ENST00000532791 VSTM2LQ96N03 204 aa17.28■□□□□ 0.36
FGFR1-238ENST00000532791 POMT1Q9Y6A1 747 aa17.28■□□□□ 0.36
FGFR1-238ENST00000532791 BRS3P32247 399 aa17.27■□□□□ 0.36
FGFR1-238ENST00000532791 LGALS7P47929 136 aa17.27■□□□□ 0.36
FGFR1-238ENST00000532791 PRSS42Q7Z5A4 293 aa17.27■□□□□ 0.36
FGFR1-238ENST00000532791 ATG4DQ86TL0 474 aaPredicted RBP17.27■□□□□ 0.36
FGFR1-238ENST00000532791 SH2D2AQ9NP31 389 aa17.27■□□□□ 0.36
FGFR1-238ENST00000532791 NPTNQ9Y639 398 aa17.27■□□□□ 0.36
FGFR1-238ENST00000532791 GATCO43716 136 aaKnown RBP17.27■□□□□ 0.36
FGFR1-238ENST00000532791 NQO2P16083 231 aa17.27■□□□□ 0.36
FGFR1-238ENST00000532791 MVDP53602 400 aa17.27■□□□□ 0.36
FGFR1-238ENST00000532791 LSM6P62312 80 aaKnown RBP17.27■□□□□ 0.36
FGFR1-238ENST00000532791 TIAL1Q01085 375 aaKnown RBP eCLIP17.27■□□□□ 0.367e-8■■■■■ 27.6
FGFR1-238ENST00000532791 RAG2P55895 527 aa17.27■□□□□ 0.36
FGFR1-238ENST00000532791 RTP5Q14D33 572 aa17.27■□□□□ 0.36
FGFR1-238ENST00000532791 TMEM37Q8WXS4 190 aa17.27■□□□□ 0.36
FGFR1-238ENST00000532791 WDR13Q9H1Z4 485 aa17.27■□□□□ 0.36
FGFR1-238ENST00000532791 TNRC6CQ9HCJ0 1690 aaKnown RBP17.27■□□□□ 0.35
FGFR1-238ENST00000532791 CST2P09228 141 aa17.27■□□□□ 0.35
FGFR1-238ENST00000532791 HNRNPA3P51991 378 aaKnown RBP17.27■□□□□ 0.35
FGFR1-238ENST00000532791 HLXQ14774 488 aaPredicted RBP17.27■□□□□ 0.35
FGFR1-238ENST00000532791 PRR7Q8TB68 274 aa17.27■□□□□ 0.35
FGFR1-238ENST00000532791 COA4Q9NYJ1 87 aa17.27■□□□□ 0.35
FGFR1-238ENST00000532791 F2RL2O00254 374 aa17.26■□□□□ 0.35
FGFR1-238ENST00000532791 PHOX2AO14813 284 aa17.26■□□□□ 0.35
FGFR1-238ENST00000532791 SCGB1C2P0DMR2 95 aa17.26■□□□□ 0.35
FGFR1-238ENST00000532791 SPINK2P20155 84 aa17.26■□□□□ 0.35
FGFR1-238ENST00000532791 PRSS54Q6PEW0 395 aa17.26■□□□□ 0.35
FGFR1-238ENST00000532791 VAMP8Q9BV40 100 aa17.26■□□□□ 0.35
FGFR1-238ENST00000532791 GLI3P10071 1580 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms