RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 H3BP45 60 aa13.06□□□□□ -0.32
PCDHA9-202ENST00000532602 FOXS1O43638 330 aa13.06□□□□□ -0.32
PCDHA9-202ENST00000532602 OR2C1O95371 312 aa13.06□□□□□ -0.32
PCDHA9-202ENST00000532602 OXA1LQ15070 435 aa13.06□□□□□ -0.32
PCDHA9-202ENST00000532602 SLC25A45Q8N413 288 aa13.06□□□□□ -0.32
PCDHA9-202ENST00000532602 CCL21O00585 134 aa13.06□□□□□ -0.32
PCDHA9-202ENST00000532602 MRM1Q6IN84 353 aaKnown RBP13.06□□□□□ -0.32
PCDHA9-202ENST00000532602 PRR27Q6MZM9 219 aa13.06□□□□□ -0.32
PCDHA9-202ENST00000532602 WDR61Q9GZS3 305 aaKnown RBP13.06□□□□□ -0.32
PCDHA9-202ENST00000532602 SIPA1L1O43166 1804 aa13.06□□□□□ -0.32
PCDHA9-202ENST00000532602 TMEM272A0A1B0GTI8 110 aa13.06□□□□□ -0.32
PCDHA9-202ENST00000532602 DNASE2O00115 360 aaPredicted RBP13.06□□□□□ -0.32
PCDHA9-202ENST00000532602 SLC31A2O15432 143 aa13.06□□□□□ -0.32
PCDHA9-202ENST00000532602 SPP1P10451 314 aa13.06□□□□□ -0.32
PCDHA9-202ENST00000532602 ZNF17P17021 662 aa13.06□□□□□ -0.32
PCDHA9-202ENST00000532602 NTNG2Q96CW9 530 aa13.06□□□□□ -0.32
PCDHA9-202ENST00000532602 TMEM208Q9BTX3 173 aa13.06□□□□□ -0.32
PCDHA9-202ENST00000532602 DNAJC13O75165 2243 aa13.06□□□□□ -0.32
PCDHA9-202ENST00000532602 DUS4LO95620 317 aaKnown RBP13.06□□□□□ -0.32
PCDHA9-202ENST00000532602 STARD6P59095 220 aa13.06□□□□□ -0.32
PCDHA9-202ENST00000532602 ADAM5Q6NVV9 412 aa13.06□□□□□ -0.32
PCDHA9-202ENST00000532602 INO80CQ6PI98 192 aaPredicted RBP13.06□□□□□ -0.32
PCDHA9-202ENST00000532602 ZNF574Q6ZN55 896 aaPredicted RBP13.06□□□□□ -0.32
PCDHA9-202ENST00000532602 C14orf79Q96F83 325 aa13.06□□□□□ -0.32
PCDHA9-202ENST00000532602 LSM2Q9Y333 95 aaKnown RBP13.06□□□□□ -0.32
PCDHA9-202ENST00000532602 WDR90Q96KV7 1748 aa13.06□□□□□ -0.32
PCDHA9-202ENST00000532602 UBE2L5PA0A1B0GUS4 154 aa13.06□□□□□ -0.32
PCDHA9-202ENST00000532602 LGALS7P47929 136 aa13.06□□□□□ -0.32
PCDHA9-202ENST00000532602 HIKESHIQ53FT3 197 aa13.06□□□□□ -0.32
PCDHA9-202ENST00000532602 GMPPAQ96IJ6 420 aaPredicted RBP13.06□□□□□ -0.32
PCDHA9-202ENST00000532602 RASL12Q9NYN1 266 aa13.06□□□□□ -0.32
PCDHA9-202ENST00000532602 RNF7Q9UBF6 113 aa13.06□□□□□ -0.32
PCDHA9-202ENST00000532602 EXOGQ9Y2C4 368 aaKnown RBP13.06□□□□□ -0.32
PCDHA9-202ENST00000532602 NKX2-8O15522 239 aa13.05□□□□□ -0.32
PCDHA9-202ENST00000532602 OR4S2Q8NH73 311 aa13.05□□□□□ -0.32
PCDHA9-202ENST00000532602 C20orf24Q9BUV8 137 aa13.05□□□□□ -0.32
PCDHA9-202ENST00000532602 GREM1O60565 184 aa13.05□□□□□ -0.32
PCDHA9-202ENST00000532602 RTP5Q14D33 572 aa13.05□□□□□ -0.32
PCDHA9-202ENST00000532602 ZNF721Q8TF20 911 aa13.05□□□□□ -0.32
PCDHA9-202ENST00000532602 SP1P08047 785 aa13.05□□□□□ -0.32
PCDHA9-202ENST00000532602 OR3A1P47881 315 aa13.05□□□□□ -0.32
PCDHA9-202ENST00000532602 OR8D4Q8NGM9 314 aa13.05□□□□□ -0.32
PCDHA9-202ENST00000532602 OR5M8Q8NGP6 311 aa13.05□□□□□ -0.32
PCDHA9-202ENST00000532602 MAP6Q96JE9 813 aa13.05□□□□□ -0.32
PCDHA9-202ENST00000532602 FAAP24Q9BTP7 215 aa13.05□□□□□ -0.32
PCDHA9-202ENST00000532602 RAB18Q9NP72 206 aa13.05□□□□□ -0.32
PCDHA9-202ENST00000532602 YTHDF2Q9Y5A9 579 aaKnown RBP13.05□□□□□ -0.32
PCDHA9-202ENST00000532602 PNPP00491 289 aa13.05□□□□□ -0.32
PCDHA9-202ENST00000532602 LIMK1P53667 647 aa13.05□□□□□ -0.32
PCDHA9-202ENST00000532602 TMEM267Q0VDI3 215 aaPredicted RBP13.05□□□□□ -0.32
PCDHA9-202ENST00000532602 FOXO1Q12778 655 aa13.05□□□□□ -0.32
PCDHA9-202ENST00000532602 LINC00303Q3SY05 128 aa13.05□□□□□ -0.32
PCDHA9-202ENST00000532602 OR52L2PQ8NGH6 319 aa13.05□□□□□ -0.32
PCDHA9-202ENST00000532602 OR10Z1Q8NGY1 313 aa13.05□□□□□ -0.32
PCDHA9-202ENST00000532602 CALCRP30988 508 aa13.05□□□□□ -0.32
PCDHA9-202ENST00000532602 NCR3LG1Q68D85 454 aa13.05□□□□□ -0.32
PCDHA9-202ENST00000532602 ATG4DQ86TL0 474 aaPredicted RBP13.05□□□□□ -0.32
PCDHA9-202ENST00000532602 NHLRC2Q8NBF2 726 aa13.05□□□□□ -0.32
PCDHA9-202ENST00000532602 MRGPRDQ8TDS7 321 aa13.05□□□□□ -0.32
PCDHA9-202ENST00000532602 SRRQ9GZT4 340 aa13.05□□□□□ -0.32
PCDHA9-202ENST00000532602 PILRBQ9UKJ0 227 aa13.05□□□□□ -0.32
PCDHA9-202ENST00000532602 SLC45A2Q9UMX9 530 aa13.05□□□□□ -0.32
PCDHA9-202ENST00000532602 KCNMB2Q9Y691 235 aa13.05□□□□□ -0.32
PCDHA9-202ENST00000532602 PRSS44E7EML9 344 aa13.04□□□□□ -0.32
PCDHA9-202ENST00000532602 MRPS11P82912 194 aaKnown RBP13.04□□□□□ -0.32
PCDHA9-202ENST00000532602 COL19A1Q14993 1142 aa13.04□□□□□ -0.32
PCDHA9-202ENST00000532602 MESTQ5EB52 335 aa13.04□□□□□ -0.32
PCDHA9-202ENST00000532602 RXFP4Q8TDU9 374 aa13.04□□□□□ -0.32
PCDHA9-202ENST00000532602 ST8SIA2Q92186 375 aa13.04□□□□□ -0.32
PCDHA9-202ENST00000532602 OR2D2Q9H210 308 aa13.04□□□□□ -0.32
PCDHA9-202ENST00000532602 G3V3Q6 166 aa13.04□□□□□ -0.32
PCDHA9-202ENST00000532602 TMPRSS2O15393 492 aa13.04□□□□□ -0.32
PCDHA9-202ENST00000532602 CST7O76096 145 aa13.04□□□□□ -0.32
PCDHA9-202ENST00000532602 ASCL1P50553 236 aa13.04□□□□□ -0.32
PCDHA9-202ENST00000532602 EXOSC2Q13868 293 aaKnown RBP13.04□□□□□ -0.32
PCDHA9-202ENST00000532602 C1orf174Q8IYL3 243 aa13.04□□□□□ -0.32
PCDHA9-202ENST00000532602 FOXB2Q5VYV0 432 aa13.04□□□□□ -0.32
PCDHA9-202ENST00000532602 ZNF501Q96CX3 271 aaPredicted RBP13.04□□□□□ -0.32
PCDHA9-202ENST00000532602 GZMHP20718 246 aa13.04□□□□□ -0.32
PCDHA9-202ENST00000532602 KRTCAP3Q53RY4 240 aa13.04□□□□□ -0.32
PCDHA9-202ENST00000532602 ATP1A1-AS1Q5TC04 95 aa13.04□□□□□ -0.32
PCDHA9-202ENST00000532602 TCTE3Q8IZS6 198 aa13.04□□□□□ -0.32
PCDHA9-202ENST00000532602 C10orf111Q8N326 155 aa13.04□□□□□ -0.32
PCDHA9-202ENST00000532602 LSMEM1Q8N8F7 131 aa13.04□□□□□ -0.32
PCDHA9-202ENST00000532602 CTSBP07858 339 aa13.04□□□□□ -0.32
PCDHA9-202ENST00000532602 MLF1P58340 268 aa13.04□□□□□ -0.32
PCDHA9-202ENST00000532602 DEFA6Q01524 100 aa13.04□□□□□ -0.32
PCDHA9-202ENST00000532602 PAX5Q02548 391 aa13.04□□□□□ -0.32
PCDHA9-202ENST00000532602 IGKV1-8A0A0C4DH67 115 aa13.03□□□□□ -0.32
PCDHA9-202ENST00000532602 CENPVL1A0A0U1RR11 272 aa13.03□□□□□ -0.32
PCDHA9-202ENST00000532602 DCTN6O00399 190 aa13.03□□□□□ -0.32
PCDHA9-202ENST00000532602 FAM3AP98173 230 aa13.03□□□□□ -0.32
PCDHA9-202ENST00000532602 TGIF1Q15583 401 aa13.03□□□□□ -0.32
PCDHA9-202ENST00000532602 PLAC9Q5JTB6 97 aa13.03□□□□□ -0.32
PCDHA9-202ENST00000532602 C6orf201Q7Z4U5 140 aa13.03□□□□□ -0.32
PCDHA9-202ENST00000532602 SPICQ8N5J4 248 aa13.03□□□□□ -0.32
PCDHA9-202ENST00000532602 CABLES2Q9BTV7 478 aa13.03□□□□□ -0.32
PCDHA9-202ENST00000532602 AKR7A2O43488 359 aa13.03□□□□□ -0.32
PCDHA9-202ENST00000532602 BCL2L11O43521 198 aa13.03□□□□□ -0.32
PCDHA9-202ENST00000532602 FUCA1P04066 466 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms