RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 ZNF254O75437 659 aa7.1□□□□□ -1.27
USF1-210ENST00000531842 DUS4LO95620 317 aaKnown RBP7.1□□□□□ -1.27
USF1-210ENST00000531842 NHLRC4P0CG21 123 aaPredicted RBP7.1□□□□□ -1.27
USF1-210ENST00000531842 GDNFP39905 211 aa7.1□□□□□ -1.27
USF1-210ENST00000531842 RIDAP52758 137 aaKnown RBP7.1□□□□□ -1.27
USF1-210ENST00000531842 RPL23AP62750 156 aaKnown RBP7.1□□□□□ -1.27
USF1-210ENST00000531842 EDDM3AQ14507 147 aa7.1□□□□□ -1.27
USF1-210ENST00000531842 LCN1P1Q5VSP4 162 aa7.1□□□□□ -1.27
USF1-210ENST00000531842 AADACL4Q5VUY2 407 aa7.1□□□□□ -1.27
USF1-210ENST00000531842 SLX4IPQ5VYV7 408 aa7.1□□□□□ -1.27
USF1-210ENST00000531842 DEGS2Q6QHC5 323 aa7.1□□□□□ -1.27
USF1-210ENST00000531842 OR2W3Q7Z3T1 314 aa7.1□□□□□ -1.27
USF1-210ENST00000531842 ANGPTL5Q86XS5 388 aa7.1□□□□□ -1.27
USF1-210ENST00000531842 ZNF561Q8N587 486 aa7.1□□□□□ -1.27
USF1-210ENST00000531842 ASCC1Q8N9N2 400 aaKnown RBP7.1□□□□□ -1.27
USF1-210ENST00000531842 POC1AQ8NBT0 407 aa7.1□□□□□ -1.27
USF1-210ENST00000531842 KLHL30-AS1Q8NEE0 82 aa7.1□□□□□ -1.27
USF1-210ENST00000531842 OR11H6Q8NGC7 330 aa7.1□□□□□ -1.27
USF1-210ENST00000531842 OR13D1Q8NGV5 346 aa7.1□□□□□ -1.27
USF1-210ENST00000531842 ASB17Q8WXJ9 295 aa7.1□□□□□ -1.27
USF1-210ENST00000531842 ITFG2Q969R8 447 aa7.1□□□□□ -1.27
USF1-210ENST00000531842 FOXRED1Q96CU9 486 aaPredicted RBP7.1□□□□□ -1.27
USF1-210ENST00000531842 TEAD3Q99594 435 aa7.1□□□□□ -1.27
USF1-210ENST00000531842 CIB1Q99828 191 aa7.1□□□□□ -1.27
USF1-210ENST00000531842 OSBPL10Q9BXB5 764 aa7.1□□□□□ -1.27
USF1-210ENST00000531842 GPR173Q9NS66 373 aa7.1□□□□□ -1.27
USF1-210ENST00000531842 FAM206AQ9NX38 181 aa7.1□□□□□ -1.27
USF1-210ENST00000531842 IL36RNQ9UBH0 155 aa7.1□□□□□ -1.27
USF1-210ENST00000531842 OAZ3Q9UMX2 235 aa7.1□□□□□ -1.27
USF1-210ENST00000531842 COPS3Q9UNS2 423 aa7.1□□□□□ -1.27
USF1-210ENST00000531842 POLDIP2Q9Y2S7 368 aa7.1□□□□□ -1.27
USF1-210ENST00000531842 FRAS1Q86XX4 4008 aa7.09□□□□□ -1.27
USF1-210ENST00000531842 IGHV2-26A0A0B4J1V2 119 aa7.09□□□□□ -1.27
USF1-210ENST00000531842 TMEM82A0PJX8 343 aa7.09□□□□□ -1.27
USF1-210ENST00000531842 NUDT19A8MXV4 375 aa7.09□□□□□ -1.27
USF1-210ENST00000531842 G3V2T6 193 aa7.09□□□□□ -1.27
USF1-210ENST00000531842 H3BSH0 61 aa7.09□□□□□ -1.27
USF1-210ENST00000531842 H3BUI4 141 aa7.09□□□□□ -1.27
USF1-210ENST00000531842 J3QT63 122 aa7.09□□□□□ -1.27
USF1-210ENST00000531842 MAGEB4O15481 346 aaPredicted RBP7.09□□□□□ -1.27
USF1-210ENST00000531842 SRSF10O75494 262 aaKnown RBP7.09□□□□□ -1.27
USF1-210ENST00000531842 DHRS3O75911 302 aa7.09□□□□□ -1.27
USF1-210ENST00000531842 CLIC3O95833 236 aa7.09□□□□□ -1.27
USF1-210ENST00000531842 PGA5P0DJD9 388 aa7.09□□□□□ -1.27
USF1-210ENST00000531842 ZNF728P0DKX0 622 aa7.09□□□□□ -1.27
USF1-210ENST00000531842 CALCBP10092 127 aa7.09□□□□□ -1.27
USF1-210ENST00000531842 FASP25445 335 aa7.09□□□□□ -1.27
USF1-210ENST00000531842 ECI1P42126 302 aa7.09□□□□□ -1.27
USF1-210ENST00000531842 RASSF2P50749 326 aa7.09□□□□□ -1.27
USF1-210ENST00000531842 DYNLT3P51808 116 aa7.09□□□□□ -1.27
USF1-210ENST00000531842 CLVS2Q5SYC1 327 aa7.09□□□□□ -1.27
USF1-210ENST00000531842 BCL2L15Q5TBC7 163 aa7.09□□□□□ -1.27
USF1-210ENST00000531842 PRAMEF5Q5TYX0 476 aa7.09□□□□□ -1.27
USF1-210ENST00000531842 OVCH2Q7RTZ1 564 aa7.09□□□□□ -1.27
USF1-210ENST00000531842 SBSPONQ8IVN8 264 aa7.09□□□□□ -1.27
USF1-210ENST00000531842 ZNF679Q8IYX0 411 aa7.09□□□□□ -1.27
USF1-210ENST00000531842 ZNF676Q8N7Q3 588 aa7.09□□□□□ -1.27
USF1-210ENST00000531842 OR4P4Q8NGL7 312 aa7.09□□□□□ -1.27
USF1-210ENST00000531842 RNF166Q96A37 237 aaPredicted RBP7.09□□□□□ -1.27
USF1-210ENST00000531842 RAX2Q96IS3 184 aa7.09□□□□□ -1.27
USF1-210ENST00000531842 CNN2Q99439 309 aaKnown RBP7.09□□□□□ -1.27
USF1-210ENST00000531842 P2RX4Q99571 388 aa7.09□□□□□ -1.27
USF1-210ENST00000531842 CHST6Q9GZX3 395 aa7.09□□□□□ -1.27
USF1-210ENST00000531842 H2AFY2Q9P0M6 372 aaPredicted RBP7.09□□□□□ -1.27
USF1-210ENST00000531842 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.09□□□□□ -1.27
USF1-210ENST00000531842 FAM230AA0A1W2PPH8 454 aa7.08□□□□□ -1.28
USF1-210ENST00000531842 PSMB11A5LHX3 300 aa7.08□□□□□ -1.28
USF1-210ENST00000531842 SAC3D1A6NKF1 404 aa7.08□□□□□ -1.28
USF1-210ENST00000531842 LINC01548A6NM66 108 aa7.08□□□□□ -1.28
USF1-210ENST00000531842 LOC110117498-PIK3R3F6TDL0 507 aa7.08□□□□□ -1.28
USF1-210ENST00000531842 DLGAP1O14490 977 aa7.08□□□□□ -1.28
USF1-210ENST00000531842 IGHA1P01876 353 aa7.08□□□□□ -1.28
USF1-210ENST00000531842 ALDOBP05062 364 aa7.08□□□□□ -1.28
USF1-210ENST00000531842 ROM1Q03395 351 aa7.08□□□□□ -1.28
USF1-210ENST00000531842 MFGE8Q08431 387 aaPredicted RBP7.08□□□□□ -1.28
USF1-210ENST00000531842 ZNF322Q6U7Q0 402 aaPredicted RBP7.08□□□□□ -1.28
USF1-210ENST00000531842 GDPD3Q7L5L3 318 aa7.08□□□□□ -1.28
USF1-210ENST00000531842 KRT74Q7RTS7 529 aa7.08□□□□□ -1.28
USF1-210ENST00000531842 SSX6Q7RTT6 188 aa7.08□□□□□ -1.28
USF1-210ENST00000531842 CALHM1Q8IU99 346 aa7.08□□□□□ -1.28
USF1-210ENST00000531842 TCEANCQ8N8B7 351 aa7.08□□□□□ -1.28
USF1-210ENST00000531842 TRMT10AQ8TBZ6 339 aaKnown RBP7.08□□□□□ -1.28
USF1-210ENST00000531842 TMEM163Q8TC26 289 aa7.08□□□□□ -1.28
USF1-210ENST00000531842 DNAJC9Q8WXX5 260 aa7.08□□□□□ -1.28
USF1-210ENST00000531842 CENPNQ96H22 339 aaPredicted RBP7.08□□□□□ -1.28
USF1-210ENST00000531842 RCHY1Q96PM5 261 aa7.08□□□□□ -1.28
USF1-210ENST00000531842 IL4I1Q96RQ9 567 aa7.08□□□□□ -1.28
USF1-210ENST00000531842 APOL4Q9BPW4 351 aa7.08□□□□□ -1.28
USF1-210ENST00000531842 NRIP2Q9BQI9 281 aa7.08□□□□□ -1.28
USF1-210ENST00000531842 GABARAPL3Q9BY60 117 aa7.08□□□□□ -1.28
USF1-210ENST00000531842 ADGRL4Q9HBW9 690 aa7.08□□□□□ -1.28
USF1-210ENST00000531842 KRT84Q9NSB2 600 aa7.08□□□□□ -1.28
USF1-210ENST00000531842 NUFIP1Q9UHK0 495 aaKnown RBP7.08□□□□□ -1.28
USF1-210ENST00000531842 OR52A1Q9UKL2 312 aa7.08□□□□□ -1.28
USF1-210ENST00000531842 SLC7A11Q9UPY5 501 aa7.08□□□□□ -1.28
USF1-210ENST00000531842 SLC22A13Q9Y226 551 aa7.08□□□□□ -1.28
USF1-210ENST00000531842 PQLC2LA1A4F0 135 aa7.07□□□□□ -1.28
USF1-210ENST00000531842 ZNF670-ZNF695F2Z2N8 137 aa7.07□□□□□ -1.28
USF1-210ENST00000531842 K7N7A8 449 aa7.07□□□□□ -1.28
USF1-210ENST00000531842 NOS1APO75052 506 aaPredicted RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms