RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 MRPL48Q96GC5 212 aaKnown RBP18.04■□□□□ 0.48
TRAPPC4-210ENST00000531290 ZNF714Q96N38 554 aa18.04■□□□□ 0.48
TRAPPC4-210ENST00000531290 FOXJ3Q9UPW0 622 aa18.04■□□□□ 0.48
TRAPPC4-210ENST00000531290 DAPL1A0PJW8 107 aa18.03■□□□□ 0.48
TRAPPC4-210ENST00000531290 TMEM82A0PJX8 343 aa18.03■□□□□ 0.48
TRAPPC4-210ENST00000531290 CHST1O43916 411 aa18.03■□□□□ 0.48
TRAPPC4-210ENST00000531290 HAND1O96004 215 aa18.03■□□□□ 0.48
TRAPPC4-210ENST00000531290 IGHV1-8P0DP01 117 aa18.03■□□□□ 0.48
TRAPPC4-210ENST00000531290 VSIG10L2P0DP72 767 aa18.03■□□□□ 0.48
TRAPPC4-210ENST00000531290 GABRR1P24046 479 aa18.03■□□□□ 0.48
TRAPPC4-210ENST00000531290 PEX2P28328 305 aa18.03■□□□□ 0.48
TRAPPC4-210ENST00000531290 KIR3DL2P43630 455 aa18.03■□□□□ 0.48
TRAPPC4-210ENST00000531290 RAB13P51153 203 aa18.03■□□□□ 0.48
TRAPPC4-210ENST00000531290 MTCP1P56278 107 aa18.03■□□□□ 0.48
TRAPPC4-210ENST00000531290 GABPB1Q06547 395 aaPredicted RBP18.03■□□□□ 0.48
TRAPPC4-210ENST00000531290 SSX2Q16385 188 aa18.03■□□□□ 0.48
TRAPPC4-210ENST00000531290 LRRC36Q1X8D7 754 aa18.03■□□□□ 0.48
TRAPPC4-210ENST00000531290 KCTD20Q7Z5Y7 419 aa18.03■□□□□ 0.48
TRAPPC4-210ENST00000531290 KLHDC1Q8N7A1 406 aa18.03■□□□□ 0.48
TRAPPC4-210ENST00000531290 C11orf44Q8N8P7 122 aa18.03■□□□□ 0.48
TRAPPC4-210ENST00000531290 OR11H6Q8NGC7 330 aa18.03■□□□□ 0.48
TRAPPC4-210ENST00000531290 CDCA4Q9BXL8 241 aa18.03■□□□□ 0.48
TRAPPC4-210ENST00000531290 SEBOXQ9HB31 216 aaPredicted RBP18.03■□□□□ 0.48
TRAPPC4-210ENST00000531290 GLS2Q9UI32 602 aa18.03■□□□□ 0.48
TRAPPC4-210ENST00000531290 OCM2P0CE71 109 aa18.02■□□□□ 0.48
TRAPPC4-210ENST00000531290 OCMP0CE72 109 aaPredicted RBP18.02■□□□□ 0.48
TRAPPC4-210ENST00000531290 ZNF20P17024 532 aa18.02■□□□□ 0.48
TRAPPC4-210ENST00000531290 PRKACBP22694 351 aa18.02■□□□□ 0.48
TRAPPC4-210ENST00000531290 POU3F4P49335 361 aa18.02■□□□□ 0.48
TRAPPC4-210ENST00000531290 OR12D2P58182 307 aa18.02■□□□□ 0.48
TRAPPC4-210ENST00000531290 ISL1P61371 349 aa18.02■□□□□ 0.48
TRAPPC4-210ENST00000531290 GRK1Q15835 563 aa18.02■□□□□ 0.48
TRAPPC4-210ENST00000531290 ZNF626Q68DY1 528 aa18.02■□□□□ 0.48
TRAPPC4-210ENST00000531290 DYNAPQ8N1N2 210 aa18.02■□□□□ 0.48
TRAPPC4-210ENST00000531290 OR2G2Q8NGZ5 317 aa18.02■□□□□ 0.48
TRAPPC4-210ENST00000531290 RPS4Y2Q8TD47 263 aa18.02■□□□□ 0.48
TRAPPC4-210ENST00000531290 FGGYQ96C11 551 aa18.02■□□□□ 0.48
TRAPPC4-210ENST00000531290 PITPNC1Q9UKF7 332 aa18.02■□□□□ 0.48
TRAPPC4-210ENST00000531290 WNK1Q9H4A3 2382 aa18.01■□□□□ 0.47
TRAPPC4-210ENST00000531290 ODF3BA8MYP8 253 aa18.01■□□□□ 0.47
TRAPPC4-210ENST00000531290 SLC16A6O15403 523 aa18.01■□□□□ 0.47
TRAPPC4-210ENST00000531290 ATF1P18846 271 aa18.01■□□□□ 0.47
TRAPPC4-210ENST00000531290 DUSP1P28562 367 aa18.01■□□□□ 0.47
TRAPPC4-210ENST00000531290 C1QL4Q86Z23 238 aa18.01■□□□□ 0.47
TRAPPC4-210ENST00000531290 FAM58AQ8N1B3 248 aa18.01■□□□□ 0.47
TRAPPC4-210ENST00000531290 ACBD7Q8N6N7 88 aa18.01■□□□□ 0.47
TRAPPC4-210ENST00000531290 PACRGLQ8N7B6 248 aa18.01■□□□□ 0.47
TRAPPC4-210ENST00000531290 RHOXF1Q8NHV9 184 aa18.01■□□□□ 0.47
TRAPPC4-210ENST00000531290 ADAT3Q96EY9 351 aaPredicted RBP18.01■□□□□ 0.47
TRAPPC4-210ENST00000531290 CHST6Q9GZX3 395 aa18.01■□□□□ 0.47
TRAPPC4-210ENST00000531290 RBFOX1Q9NWB1 397 aaKnown RBP18.01■□□□□ 0.47
TRAPPC4-210ENST00000531290 TCF19Q9Y242 345 aa18.01■□□□□ 0.47
TRAPPC4-210ENST00000531290 ANKRD65E5RJM6 399 aa18■□□□□ 0.47
TRAPPC4-210ENST00000531290 E9PQ18 207 aa18■□□□□ 0.47
TRAPPC4-210ENST00000531290 FADS2O95864 444 aaKnown RBP18■□□□□ 0.47
TRAPPC4-210ENST00000531290 IGHA1P01876 353 aa18■□□□□ 0.47
TRAPPC4-210ENST00000531290 BCL3P20749 454 aa18■□□□□ 0.47
TRAPPC4-210ENST00000531290 NPBWR2P48146 333 aa18■□□□□ 0.47
TRAPPC4-210ENST00000531290 ACTA2P62736 377 aa18■□□□□ 0.47
TRAPPC4-210ENST00000531290 ACTG2P63267 376 aa18■□□□□ 0.47
TRAPPC4-210ENST00000531290 LHFPL2Q6ZUX7 228 aa18■□□□□ 0.47
TRAPPC4-210ENST00000531290 UTS2BQ765I0 119 aa18■□□□□ 0.47
TRAPPC4-210ENST00000531290 ZNF676Q8N7Q3 588 aa18■□□□□ 0.47
TRAPPC4-210ENST00000531290 OR52N4Q8NGI2 321 aa18■□□□□ 0.47
TRAPPC4-210ENST00000531290 CFHR4Q92496 578 aa18■□□□□ 0.47
TRAPPC4-210ENST00000531290 FRRS1LQ9P0K9 344 aa18■□□□□ 0.47
TRAPPC4-210ENST00000531290 IL36RNQ9UBH0 155 aa18■□□□□ 0.47
TRAPPC4-210ENST00000531290 RPL36Q9Y3U8 105 aaKnown RBP18■□□□□ 0.47
TRAPPC4-210ENST00000531290 LINC00312Q9Y6C7 94 aa18■□□□□ 0.47
TRAPPC4-210ENST00000531290 NOTCH1P46531 2555 aa17.99■□□□□ 0.47
TRAPPC4-210ENST00000531290 IGKV1-9A0A0C4DH69 117 aa17.99■□□□□ 0.47
TRAPPC4-210ENST00000531290 TRBV2A0A0J9YWF9 115 aa17.99■□□□□ 0.47
TRAPPC4-210ENST00000531290 H3BUI4 141 aa17.99■□□□□ 0.47
TRAPPC4-210ENST00000531290 ISG15P05161 165 aa17.99■□□□□ 0.47
TRAPPC4-210ENST00000531290 PRKACAP17612 351 aa17.99■□□□□ 0.47
TRAPPC4-210ENST00000531290 AZGP1P25311 298 aaKnown RBP17.99■□□□□ 0.47
TRAPPC4-210ENST00000531290 ZNF91Q05481 1191 aa17.99■□□□□ 0.47
TRAPPC4-210ENST00000531290 TTC23Q5W5X9 447 aa17.99■□□□□ 0.47
TRAPPC4-210ENST00000531290 LPCAT4Q643R3 524 aa17.99■□□□□ 0.47
TRAPPC4-210ENST00000531290 TPRX1Q8N7U7 411 aa17.99■□□□□ 0.47
TRAPPC4-210ENST00000531290 RNF166Q96A37 237 aaPredicted RBP17.99■□□□□ 0.47
TRAPPC4-210ENST00000531290 SPSB1Q96BD6 273 aa17.99■□□□□ 0.47
TRAPPC4-210ENST00000531290 VCXQ9H320 206 aa17.99■□□□□ 0.47
TRAPPC4-210ENST00000531290 AASSQ9UDR5 926 aa17.99■□□□□ 0.47
TRAPPC4-210ENST00000531290 EXOGQ9Y2C4 368 aaKnown RBP17.99■□□□□ 0.47
TRAPPC4-210ENST00000531290 SESN1Q9Y6P5 492 aa17.99■□□□□ 0.47
TRAPPC4-210ENST00000531290 A6NDX4 124 aa17.98■□□□□ 0.47
TRAPPC4-210ENST00000531290 MGST3O14880 152 aa17.98■□□□□ 0.47
TRAPPC4-210ENST00000531290 HTR1AP08908 422 aa17.98■□□□□ 0.47
TRAPPC4-210ENST00000531290 CALCBP10092 127 aa17.98■□□□□ 0.47
TRAPPC4-210ENST00000531290 DBTP11182 482 aaKnown RBP17.98■□□□□ 0.47
TRAPPC4-210ENST00000531290 SNU13P55769 128 aaKnown RBP17.98■□□□□ 0.47
TRAPPC4-210ENST00000531290 PDZK1IP1Q13113 114 aa17.98■□□□□ 0.47
TRAPPC4-210ENST00000531290 ZNF146Q15072 292 aa17.98■□□□□ 0.47
TRAPPC4-210ENST00000531290 KLHL22Q53GT1 634 aa17.98■□□□□ 0.47
TRAPPC4-210ENST00000531290 SPIN3Q5JUX0 258 aa17.98■□□□□ 0.47
TRAPPC4-210ENST00000531290 MINOS1Q5TGZ0 78 aa17.98■□□□□ 0.47
TRAPPC4-210ENST00000531290 HIST2H2BDQ6DRA6 164 aa17.98■□□□□ 0.47
TRAPPC4-210ENST00000531290 FDX2Q6P4F2 183 aa17.98■□□□□ 0.47
TRAPPC4-210ENST00000531290 CCBE1Q6UXH8 406 aaPredicted RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms