RNA–Protein interactions for RNA: ENST00000531062.1

CHEK1-211, Transcript of checkpoint kinase 1, humanhuman

TSL 2

Gene CHEK1, Length 772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-211ENST00000531062 NAB1Q13506 487 aa2.54□□□□□ -2
CHEK1-211ENST00000531062 MAD2L1BPQ15013 274 aaPredicted RBP2.54□□□□□ -2
CHEK1-211ENST00000531062 SPANXN2Q5MJ10 180 aa2.54□□□□□ -2
CHEK1-211ENST00000531062 SPOPLQ6IQ16 392 aa2.54□□□□□ -2
CHEK1-211ENST00000531062 TPGS1Q6ZTW0 290 aa2.54□□□□□ -2
CHEK1-211ENST00000531062 EIF3MQ7L2H7 374 aaKnown RBP2.54□□□□□ -2
CHEK1-211ENST00000531062 ZNF720Q7Z2F6 126 aa2.54□□□□□ -2
CHEK1-211ENST00000531062 CD302Q8IX05 232 aa2.54□□□□□ -2
CHEK1-211ENST00000531062 GABRG1Q8N1C3 465 aa2.54□□□□□ -2
CHEK1-211ENST00000531062 JAGN1Q8N5M9 183 aa2.54□□□□□ -2
CHEK1-211ENST00000531062 OR2Z1Q8NG97 314 aa2.54□□□□□ -2
CHEK1-211ENST00000531062 SPPL2BQ8TCT7 592 aa2.54□□□□□ -2
CHEK1-211ENST00000531062 CDS1Q92903 461 aa2.54□□□□□ -2
CHEK1-211ENST00000531062 ZFP3Q96NJ6 502 aa2.54□□□□□ -2
CHEK1-211ENST00000531062 KCNS3Q9BQ31 491 aa2.54□□□□□ -2
CHEK1-211ENST00000531062 ANGPTL4Q9BY76 406 aa2.54□□□□□ -2
CHEK1-211ENST00000531062 SLC7A5P2Q9GIP4 190 aa2.54□□□□□ -2
CHEK1-211ENST00000531062 ASB7Q9H672 318 aa2.54□□□□□ -2
CHEK1-211ENST00000531062 ZNF586Q9NXT0 402 aa2.54□□□□□ -2
CHEK1-211ENST00000531062 GCNT4Q9P109 453 aa2.54□□□□□ -2
CHEK1-211ENST00000531062 HMGXB4Q9UGU5 601 aa2.54□□□□□ -2
CHEK1-211ENST00000531062 ZNF230Q9UIE0 474 aaPredicted RBP2.54□□□□□ -2
CHEK1-211ENST00000531062 FARSAQ9Y285 508 aaKnown RBP2.54□□□□□ -2
CHEK1-211ENST00000531062 LRRC42Q9Y546 428 aa2.54□□□□□ -2
CHEK1-211ENST00000531062 SEC16AO15027 2179 aa2.54□□□□□ -2
CHEK1-211ENST00000531062 CACNA1EQ15878 2313 aa2.53□□□□□ -2
CHEK1-211ENST00000531062 C16orf90A8MZG2 172 aa2.53□□□□□ -2
CHEK1-211ENST00000531062 PRAMEF26H0Y7S4 382 aa2.53□□□□□ -2
CHEK1-211ENST00000531062 NME4O00746 187 aa2.53□□□□□ -2
CHEK1-211ENST00000531062 COCHO43405 550 aa2.53□□□□□ -2
CHEK1-211ENST00000531062 CDH16O75309 829 aa2.53□□□□□ -2
CHEK1-211ENST00000531062 OR2F2O95006 317 aa2.53□□□□□ -2
CHEK1-211ENST00000531062 CD160O95971 181 aa2.53□□□□□ -2
CHEK1-211ENST00000531062 SYT1P21579 422 aa2.53□□□□□ -2
CHEK1-211ENST00000531062 PRKACBP22694 351 aa2.53□□□□□ -2
CHEK1-211ENST00000531062 CLDN6P56747 220 aa2.53□□□□□ -2
CHEK1-211ENST00000531062 MAP3K7CLP57077 242 aa2.53□□□□□ -2
CHEK1-211ENST00000531062 GTF2BQ00403 316 aa2.53□□□□□ -2
CHEK1-211ENST00000531062 ZBTB6Q15916 424 aa2.53□□□□□ -2
CHEK1-211ENST00000531062 GCSAMLQ5JQS6 135 aa2.53□□□□□ -2
CHEK1-211ENST00000531062 DEGS2Q6QHC5 323 aa2.53□□□□□ -2
CHEK1-211ENST00000531062 Q6ZSR6 202 aa2.53□□□□□ -2
CHEK1-211ENST00000531062 TMEM25Q86YD3 366 aa2.53□□□□□ -2
CHEK1-211ENST00000531062 ZNF547Q8IVP9 402 aa2.53□□□□□ -2
CHEK1-211ENST00000531062 BBS7Q8IWZ6 715 aa2.53□□□□□ -2
CHEK1-211ENST00000531062 C2orf15Q8WU43 125 aaKnown RBP2.53□□□□□ -2
CHEK1-211ENST00000531062 MSANTD3Q96H12 275 aa2.53□□□□□ -2
CHEK1-211ENST00000531062 ZNF396Q96N95 335 aaPredicted RBP2.53□□□□□ -2
CHEK1-211ENST00000531062 PANX1Q96RD7 426 aa2.53□□□□□ -2
CHEK1-211ENST00000531062 BBS2Q9BXC9 721 aa2.53□□□□□ -2
CHEK1-211ENST00000531062 CALN1Q9BXU9 219 aa2.53□□□□□ -2
CHEK1-211ENST00000531062 PIGUQ9H490 435 aa2.53□□□□□ -2
CHEK1-211ENST00000531062 ACP6Q9NPH0 428 aa2.53□□□□□ -2
CHEK1-211ENST00000531062 AGPAT3Q9NRZ7 376 aa2.53□□□□□ -2
CHEK1-211ENST00000531062 CLN6Q9NWW5 311 aa2.53□□□□□ -2
CHEK1-211ENST00000531062 ZNF229Q9UJW7 825 aa2.53□□□□□ -2
CHEK1-211ENST00000531062 SAR1BQ9Y6B6 198 aa2.53□□□□□ -2
CHEK1-211ENST00000531062 PKD1L2Q7Z442 2459 aa2.53□□□□□ -2
CHEK1-211ENST00000531062 DOCK6Q96HP0 2047 aa2.52□□□□□ -2.01
CHEK1-211ENST00000531062 FAM208BQ5VWN6 2430 aa2.52□□□□□ -2.01
CHEK1-211ENST00000531062 MUC19Q7Z5P9 8384 aa2.52□□□□□ -2.01
CHEK1-211ENST00000531062 SDK2Q58EX2 2172 aa2.52□□□□□ -2.01
CHEK1-211ENST00000531062 TSPAN11A1L157 253 aa2.52□□□□□ -2.01
CHEK1-211ENST00000531062 CENPBD1B2RD01 187 aa2.52□□□□□ -2.01
CHEK1-211ENST00000531062 K7EQS6 105 aa2.52□□□□□ -2.01
CHEK1-211ENST00000531062 LHBP01229 141 aa2.52□□□□□ -2.01
CHEK1-211ENST00000531062 IGLV6-57P01721 117 aa2.52□□□□□ -2.01
CHEK1-211ENST00000531062 ERCC1P07992 297 aaPredicted RBP2.52□□□□□ -2.01
CHEK1-211ENST00000531062 PGA4P0DJD7 388 aa2.52□□□□□ -2.01
CHEK1-211ENST00000531062 PGA3P0DJD8 388 aa2.52□□□□□ -2.01
CHEK1-211ENST00000531062 PGA5P0DJD9 388 aa2.52□□□□□ -2.01
CHEK1-211ENST00000531062 HLA-EP13747 358 aa2.52□□□□□ -2.01
CHEK1-211ENST00000531062 NTF3P20783 257 aa2.52□□□□□ -2.01
CHEK1-211ENST00000531062 CD70P32970 193 aa2.52□□□□□ -2.01
CHEK1-211ENST00000531062 GGT2P36268 569 aa2.52□□□□□ -2.01
CHEK1-211ENST00000531062 RFC3P40938 356 aa2.52□□□□□ -2.01
CHEK1-211ENST00000531062 GCLMP48507 274 aa2.52□□□□□ -2.01
CHEK1-211ENST00000531062 GOLGA7BQ2TAP0 167 aa2.52□□□□□ -2.01
CHEK1-211ENST00000531062 C16orf47Q6ZP98 133 aaPredicted RBP2.52□□□□□ -2.01
CHEK1-211ENST00000531062 SSX9Q7RTT3 188 aa2.52□□□□□ -2.01
CHEK1-211ENST00000531062 STK40Q8N2I9 435 aa2.52□□□□□ -2.01
CHEK1-211ENST00000531062 TMEM86AQ8N2M4 240 aa2.52□□□□□ -2.01
CHEK1-211ENST00000531062 C12orf29Q8N999 325 aa2.52□□□□□ -2.01
CHEK1-211ENST00000531062 OR1L1Q8NH94 360 aa2.52□□□□□ -2.01
CHEK1-211ENST00000531062 DCAKDQ8WVC6 231 aa2.52□□□□□ -2.01
CHEK1-211ENST00000531062 N4BP2L2Q92802 583 aaPredicted RBP2.52□□□□□ -2.01
CHEK1-211ENST00000531062 SGTBQ96EQ0 304 aa2.52□□□□□ -2.01
CHEK1-211ENST00000531062 SMARCD1Q96GM5 515 aa2.52□□□□□ -2.01
CHEK1-211ENST00000531062 OR4K3Q96R72 315 aa2.52□□□□□ -2.01
CHEK1-211ENST00000531062 PKMYT1Q99640 499 aa2.52□□□□□ -2.01
CHEK1-211ENST00000531062 ACBD6Q9BR61 282 aa2.52□□□□□ -2.01
CHEK1-211ENST00000531062 SEC22CQ9BRL7 303 aa2.52□□□□□ -2.01
CHEK1-211ENST00000531062 UQCC2Q9BRT2 126 aa2.52□□□□□ -2.01
CHEK1-211ENST00000531062 SIGLEC7Q9Y286 467 aa2.52□□□□□ -2.01
CHEK1-211ENST00000531062 VWA8A3KMH1 1905 aa2.52□□□□□ -2.01
CHEK1-211ENST00000531062 COL5A1P20908 1838 aaPredicted RBP2.52□□□□□ -2.01
CHEK1-211ENST00000531062 PATJQ8NI35 1801 aa2.52□□□□□ -2.01
CHEK1-211ENST00000531062 FASNP49327 2511 aaKnown RBP2.51□□□□□ -2.01
CHEK1-211ENST00000531062 A0A075B6Q4 140 aa2.51□□□□□ -2.01
CHEK1-211ENST00000531062 KBTBD11-OT1A0A1B0GTJ5 212 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms