RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 DYNC1I2Q13409 638 aaKnown RBP12.73□□□□□ -0.37
CPSF1-205ENST00000531042 HABP2Q14520 560 aaPredicted RBP12.73□□□□□ -0.37
CPSF1-205ENST00000531042 TMEM244Q5VVB8 128 aa12.73□□□□□ -0.37
CPSF1-205ENST00000531042 TMEM219Q86XT9 240 aa12.73□□□□□ -0.37
CPSF1-205ENST00000531042 FAM58AQ8N1B3 248 aa12.73□□□□□ -0.37
CPSF1-205ENST00000531042 Q8N2B8 174 aa12.73□□□□□ -0.37
CPSF1-205ENST00000531042 OR52N4Q8NGI2 321 aa12.73□□□□□ -0.37
CPSF1-205ENST00000531042 ADAT3Q96EY9 351 aaPredicted RBP12.73□□□□□ -0.37
CPSF1-205ENST00000531042 CHST6Q9GZX3 395 aa12.73□□□□□ -0.37
CPSF1-205ENST00000531042 RBFOX1Q9NWB1 397 aaKnown RBP12.73□□□□□ -0.37
CPSF1-205ENST00000531042 LINC00312Q9Y6C7 94 aa12.73□□□□□ -0.37
CPSF1-205ENST00000531042 TRBV2A0A0J9YWF9 115 aa12.72□□□□□ -0.37
CPSF1-205ENST00000531042 SAC3D1A6NKF1 404 aa12.72□□□□□ -0.37
CPSF1-205ENST00000531042 G3V4G9 280 aa12.72□□□□□ -0.37
CPSF1-205ENST00000531042 PSPNO60542 156 aa12.72□□□□□ -0.37
CPSF1-205ENST00000531042 BCL3P20749 454 aa12.72□□□□□ -0.37
CPSF1-205ENST00000531042 GABRR1P24046 479 aa12.72□□□□□ -0.37
CPSF1-205ENST00000531042 DYNLT3P51808 116 aa12.72□□□□□ -0.37
CPSF1-205ENST00000531042 CDC42P60953 191 aa12.72□□□□□ -0.37
CPSF1-205ENST00000531042 ACTA2P62736 377 aa12.72□□□□□ -0.37
CPSF1-205ENST00000531042 ACTG2P63267 376 aa12.72□□□□□ -0.37
CPSF1-205ENST00000531042 ACTC1P68032 377 aa12.72□□□□□ -0.37
CPSF1-205ENST00000531042 ACTA1P68133 377 aa12.72□□□□□ -0.37
CPSF1-205ENST00000531042 GRK1Q15835 563 aa12.72□□□□□ -0.37
CPSF1-205ENST00000531042 UTS2BQ765I0 119 aa12.72□□□□□ -0.37
CPSF1-205ENST00000531042 KCTD20Q7Z5Y7 419 aa12.72□□□□□ -0.37
CPSF1-205ENST00000531042 TPRX1Q8N7U7 411 aa12.72□□□□□ -0.37
CPSF1-205ENST00000531042 OR2G2Q8NGZ5 317 aa12.72□□□□□ -0.37
CPSF1-205ENST00000531042 TRUB1Q8WWH5 349 aaKnown RBP12.72□□□□□ -0.37
CPSF1-205ENST00000531042 FRRS1LQ9P0K9 344 aa12.72□□□□□ -0.37
CPSF1-205ENST00000531042 PITPNC1Q9UKF7 332 aa12.72□□□□□ -0.37
CPSF1-205ENST00000531042 SESN1Q9Y6P5 492 aa12.72□□□□□ -0.37
CPSF1-205ENST00000531042 PLXNB1O43157 2135 aa12.71□□□□□ -0.37
CPSF1-205ENST00000531042 J3QRE1 110 aa12.71□□□□□ -0.37
CPSF1-205ENST00000531042 ENTPD6O75354 484 aa12.71□□□□□ -0.37
CPSF1-205ENST00000531042 CYB5AP00167 134 aa12.71□□□□□ -0.37
CPSF1-205ENST00000531042 ISG15P05161 165 aa12.71□□□□□ -0.37
CPSF1-205ENST00000531042 ATF1P18846 271 aa12.71□□□□□ -0.37
CPSF1-205ENST00000531042 PRKACBP22694 351 aa12.71□□□□□ -0.37
CPSF1-205ENST00000531042 AZGP1P25311 298 aaKnown RBP12.71□□□□□ -0.37
CPSF1-205ENST00000531042 DUSP1P28562 367 aa12.71□□□□□ -0.37
CPSF1-205ENST00000531042 POU3F4P49335 361 aa12.71□□□□□ -0.37
CPSF1-205ENST00000531042 MTCP1P56278 107 aa12.71□□□□□ -0.37
CPSF1-205ENST00000531042 OR12D2P58182 307 aa12.71□□□□□ -0.37
CPSF1-205ENST00000531042 ZNF146Q15072 292 aa12.71□□□□□ -0.37
CPSF1-205ENST00000531042 ZSCAN26Q16670 478 aa12.71□□□□□ -0.37
CPSF1-205ENST00000531042 BEAN1Q3B7T3 259 aa12.71□□□□□ -0.37
CPSF1-205ENST00000531042 MINOS1Q5TGZ0 78 aa12.71□□□□□ -0.37
CPSF1-205ENST00000531042 FDX2Q6P4F2 183 aa12.71□□□□□ -0.37
CPSF1-205ENST00000531042 ZNF676Q8N7Q3 588 aa12.71□□□□□ -0.37
CPSF1-205ENST00000531042 OR4S1Q8NGB4 309 aa12.71□□□□□ -0.37
CPSF1-205ENST00000531042 FGGYQ96C11 551 aa12.71□□□□□ -0.37
CPSF1-205ENST00000531042 PRSS22Q9GZN4 317 aa12.71□□□□□ -0.37
CPSF1-205ENST00000531042 HILPDAQ9Y5L2 63 aa12.71□□□□□ -0.37
CPSF1-205ENST00000531042 MINOS1-NBL1R4GNA1 71 aa12.71□□□□□ -0.37
CPSF1-205ENST00000531042 IGHV2-26A0A0B4J1V2 119 aa12.7□□□□□ -0.38
CPSF1-205ENST00000531042 MGST3O14880 152 aa12.7□□□□□ -0.38
CPSF1-205ENST00000531042 FBXO24O75426 580 aa12.7□□□□□ -0.38
CPSF1-205ENST00000531042 CALCBP10092 127 aa12.7□□□□□ -0.38
CPSF1-205ENST00000531042 CD28P10747 220 aa12.7□□□□□ -0.38
CPSF1-205ENST00000531042 JUNBP17275 347 aaPredicted RBP12.7□□□□□ -0.38
CPSF1-205ENST00000531042 PRKACAP17612 351 aa12.7□□□□□ -0.38
CPSF1-205ENST00000531042 ERP29P30040 261 aaKnown RBP12.7□□□□□ -0.38
CPSF1-205ENST00000531042 OR3A1P47881 315 aa12.7□□□□□ -0.38
CPSF1-205ENST00000531042 SNU13P55769 128 aaKnown RBP12.7□□□□□ -0.38
CPSF1-205ENST00000531042 NANOS3P60323 173 aaKnown RBP12.7□□□□□ -0.38
CPSF1-205ENST00000531042 PDZK1IP1Q13113 114 aa12.7□□□□□ -0.38
CPSF1-205ENST00000531042 SPIN3Q5JUX0 258 aa12.7□□□□□ -0.38
CPSF1-205ENST00000531042 SLC25A30Q5SVS4 291 aa12.7□□□□□ -0.38
CPSF1-205ENST00000531042 SAMD5Q5TGI4 173 aa12.7□□□□□ -0.38
CPSF1-205ENST00000531042 LHFPL2Q6ZUX7 228 aa12.7□□□□□ -0.38
CPSF1-205ENST00000531042 LYG1Q8N1E2 194 aa12.7□□□□□ -0.38
CPSF1-205ENST00000531042 WIPF2Q8TF74 440 aaPredicted RBP12.7□□□□□ -0.38
CPSF1-205ENST00000531042 RNFT2Q96EX2 444 aa12.7□□□□□ -0.38
CPSF1-205ENST00000531042 HRASLS5Q96KN8 279 aa12.7□□□□□ -0.38
CPSF1-205ENST00000531042 MBOAT4Q96T53 435 aa12.7□□□□□ -0.38
CPSF1-205ENST00000531042 CLEC7AQ9BXN2 247 aa12.7□□□□□ -0.38
CPSF1-205ENST00000531042 TMEM133Q9H2Q1 129 aa12.7□□□□□ -0.38
CPSF1-205ENST00000531042 IMPAD1Q9NX62 359 aa12.7□□□□□ -0.38
CPSF1-205ENST00000531042 GLS2Q9UI32 602 aa12.7□□□□□ -0.38
CPSF1-205ENST00000531042 DAPL1A0PJW8 107 aa12.69□□□□□ -0.38
CPSF1-205ENST00000531042 SLC16A6O15403 523 aa12.69□□□□□ -0.38
CPSF1-205ENST00000531042 CIB2O75838 187 aa12.69□□□□□ -0.38
CPSF1-205ENST00000531042 MMP23AO75900 390 aa12.69□□□□□ -0.38
CPSF1-205ENST00000531042 ZNF20P17024 532 aa12.69□□□□□ -0.38
CPSF1-205ENST00000531042 CCR9P51686 369 aa12.69□□□□□ -0.38
CPSF1-205ENST00000531042 P2RX3P56373 397 aa12.69□□□□□ -0.38
CPSF1-205ENST00000531042 SNRPGP62308 76 aaKnown RBP12.69□□□□□ -0.38
CPSF1-205ENST00000531042 SLC34A1Q06495 639 aa12.69□□□□□ -0.38
CPSF1-205ENST00000531042 NSUN5P1Q3KNT7 163 aa12.69□□□□□ -0.38
CPSF1-205ENST00000531042 KPRPQ5T749 579 aaPredicted RBP12.69□□□□□ -0.38
CPSF1-205ENST00000531042 ZBTB49Q6ZSB9 765 aa12.69□□□□□ -0.38
CPSF1-205ENST00000531042 TRAPPC6BQ86SZ2 158 aa12.69□□□□□ -0.38
CPSF1-205ENST00000531042 NDNFQ8TB73 568 aa12.69□□□□□ -0.38
CPSF1-205ENST00000531042 SPSB1Q96BD6 273 aa12.69□□□□□ -0.38
CPSF1-205ENST00000531042 OPALINQ96PE5 141 aa12.69□□□□□ -0.38
CPSF1-205ENST00000531042 WNT10AQ9GZT5 417 aa12.69□□□□□ -0.38
CPSF1-205ENST00000531042 HMG20AQ9NP66 347 aa12.69□□□□□ -0.38
CPSF1-205ENST00000531042 UBE2J1Q9Y385 318 aaPredicted RBP12.69□□□□□ -0.38
CPSF1-205ENST00000531042 IGKV1-12A0A0C4DH73 117 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms