RNA–Protein interactions for RNA: ENST00000530660.5

PCF11-204, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 2

Gene PCF11, Length 3,309 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-204ENST00000530660 IL24Q13007 206 aa12.36□□□□□ -0.43
PCF11-204ENST00000530660 TCEA2Q15560 299 aa12.36□□□□□ -0.43
PCF11-204ENST00000530660 CHRFAM7AQ494W8 412 aa12.36□□□□□ -0.43
PCF11-204ENST00000530660 ACTL10Q5JWF8 245 aa12.36□□□□□ -0.43
PCF11-204ENST00000530660 OR8G2PQ6IF36 304 aa12.36□□□□□ -0.43
PCF11-204ENST00000530660 SLC25A24Q6NUK1 477 aa12.36□□□□□ -0.43
PCF11-204ENST00000530660 VN1R4Q7Z5H5 301 aa12.36□□□□□ -0.43
PCF11-204ENST00000530660 OR5L2Q8NGL0 311 aa12.36□□□□□ -0.43
PCF11-204ENST00000530660 RBMXL1Q96E39 390 aaKnown RBP12.36□□□□□ -0.43
PCF11-204ENST00000530660 RRAGCQ9HB90 399 aa12.36□□□□□ -0.43
PCF11-204ENST00000530660 B3GALT1Q9Y5Z6 326 aa12.36□□□□□ -0.43
PCF11-204ENST00000530660 TMEM238C9JI98 176 aa12.36□□□□□ -0.43
PCF11-204ENST00000530660 ST8SIA3O43173 380 aa12.36□□□□□ -0.43
PCF11-204ENST00000530660 OR2J2O76002 312 aa12.36□□□□□ -0.43
PCF11-204ENST00000530660 ZNF157P51786 506 aaPredicted RBP12.36□□□□□ -0.43
PCF11-204ENST00000530660 FGF8P55075 233 aaPredicted RBP12.36□□□□□ -0.43
PCF11-204ENST00000530660 FOXK1P85037 733 aa12.36□□□□□ -0.43
PCF11-204ENST00000530660 KCTD18Q6PI47 426 aaPredicted RBP12.36□□□□□ -0.43
PCF11-204ENST00000530660 DGAT2L6Q6ZPD8 337 aa12.36□□□□□ -0.43
PCF11-204ENST00000530660 ERN2Q76MJ5 926 aaKnown RBP12.36□□□□□ -0.43
PCF11-204ENST00000530660 MFSD9Q8NBP5 474 aa12.36□□□□□ -0.43
PCF11-204ENST00000530660 OR8G5Q8NG78 346 aa12.36□□□□□ -0.43
PCF11-204ENST00000530660 SPPL3Q8TCT6 385 aa12.36□□□□□ -0.43
PCF11-204ENST00000530660 TECTBQ96PL2 329 aa12.36□□□□□ -0.43
PCF11-204ENST00000530660 ZNF701Q9NV72 531 aaPredicted RBP12.36□□□□□ -0.43
PCF11-204ENST00000530660 ZNF878C9JN71 531 aa12.36□□□□□ -0.43
PCF11-204ENST00000530660 LILRA1O75019 489 aa12.36□□□□□ -0.43
PCF11-204ENST00000530660 ZNF93P35789 620 aaPredicted RBP12.36□□□□□ -0.43
PCF11-204ENST00000530660 PIGPP57054 158 aa12.36□□□□□ -0.43
PCF11-204ENST00000530660 ROM1Q03395 351 aa12.36□□□□□ -0.43
PCF11-204ENST00000530660 UBE2V1Q13404 147 aa12.36□□□□□ -0.43
PCF11-204ENST00000530660 TPTE2P1Q5T6R2 138 aa12.36□□□□□ -0.43
PCF11-204ENST00000530660 Q6ZWC4 215 aa12.36□□□□□ -0.43
PCF11-204ENST00000530660 LINC00346Q8IVM7 164 aa12.36□□□□□ -0.43
PCF11-204ENST00000530660 OR4C3Q8NH37 302 aa12.36□□□□□ -0.43
PCF11-204ENST00000530660 MRGPRDQ8TDS7 321 aa12.36□□□□□ -0.43
PCF11-204ENST00000530660 TOMM40LQ969M1 308 aa12.36□□□□□ -0.43
PCF11-204ENST00000530660 ZNF524Q96C55 264 aa12.36□□□□□ -0.43
PCF11-204ENST00000530660 RASL10BQ96S79 203 aa12.36□□□□□ -0.43
PCF11-204ENST00000530660 VAMP8Q9BV40 100 aa12.36□□□□□ -0.43
PCF11-204ENST00000530660 CTDSP1Q9GZU7 261 aa12.36□□□□□ -0.43
PCF11-204ENST00000530660 CRYM-AS1A6NIL9 109 aa12.35□□□□□ -0.43
PCF11-204ENST00000530660 CIDEAO60543 219 aa12.35□□□□□ -0.43
PCF11-204ENST00000530660 C8AP07357 584 aa12.35□□□□□ -0.43
PCF11-204ENST00000530660 CTSBP07858 339 aa12.35□□□□□ -0.43
PCF11-204ENST00000530660 GCH1P30793 250 aa12.35□□□□□ -0.43
PCF11-204ENST00000530660 OR3A4PP47883 348 aa12.35□□□□□ -0.43
PCF11-204ENST00000530660 FAM3BP58499 235 aaPredicted RBP12.35□□□□□ -0.43
PCF11-204ENST00000530660 PSG6Q00889 435 aa12.35□□□□□ -0.43
PCF11-204ENST00000530660 ZNF266Q14584 549 aa12.35□□□□□ -0.43
PCF11-204ENST00000530660 UNQ5815/PRO19632Q6UWF5 114 aa12.35□□□□□ -0.43
PCF11-204ENST00000530660 DPPA3Q6W0C5 159 aa12.35□□□□□ -0.43
PCF11-204ENST00000530660 FAM160A2Q8N612 972 aaPredicted RBP12.35□□□□□ -0.43
PCF11-204ENST00000530660 OR2C3Q8N628 320 aa12.35□□□□□ -0.43
PCF11-204ENST00000530660 OR52R1Q8NGF1 315 aa12.35□□□□□ -0.43
PCF11-204ENST00000530660 DAZLQ92904 295 aaKnown RBP12.35□□□□□ -0.43
PCF11-204ENST00000530660 RBKSQ9H477 322 aa12.35□□□□□ -0.43
PCF11-204ENST00000530660 LOC102724200A0A096LPH7 203 aaPredicted RBP12.35□□□□□ -0.43
PCF11-204ENST00000530660 A0A1W2PN81 502 aa12.35□□□□□ -0.43
PCF11-204ENST00000530660 YPEL1O60688 119 aa12.35□□□□□ -0.43
PCF11-204ENST00000530660 CTLA4P16410 223 aa12.35□□□□□ -0.43
PCF11-204ENST00000530660 HSD11B1P28845 292 aa12.35□□□□□ -0.43
PCF11-204ENST00000530660 SFTPDP35247 375 aa12.35□□□□□ -0.43
PCF11-204ENST00000530660 CHRNA7P36544 502 aa12.35□□□□□ -0.43
PCF11-204ENST00000530660 CSNK1A1P48729 337 aa12.35□□□□□ -0.43
PCF11-204ENST00000530660 EGR4Q05215 589 aa12.35□□□□□ -0.43
PCF11-204ENST00000530660 C1orf185Q5T7R7 199 aa12.35□□□□□ -0.43
PCF11-204ENST00000530660 LCN15Q6UWW0 184 aa12.35□□□□□ -0.43
PCF11-204ENST00000530660 GCNT2Q8N0V5 402 aa12.35□□□□□ -0.43
PCF11-204ENST00000530660 OR5C1Q8NGR4 320 aa12.35□□□□□ -0.43
PCF11-204ENST00000530660 YPEL2Q96QA6 119 aa12.35□□□□□ -0.43
PCF11-204ENST00000530660 KLHDC3Q9BQ90 382 aa12.35□□□□□ -0.43
PCF11-204ENST00000530660 R4GMQ9 66 aa12.35□□□□□ -0.43
PCF11-204ENST00000530660 ASAH2BP0C7U1 165 aa12.34□□□□□ -0.43
PCF11-204ENST00000530660 CLDN17P56750 224 aa12.34□□□□□ -0.43
PCF11-204ENST00000530660 TMEM183BQ1AE95 376 aa12.34□□□□□ -0.43
PCF11-204ENST00000530660 TEX43Q6ZNM6 134 aa12.34□□□□□ -0.43
PCF11-204ENST00000530660 GRINAQ7Z429 371 aa12.34□□□□□ -0.43
PCF11-204ENST00000530660 SLC39A11Q8N1S5 342 aa12.34□□□□□ -0.43
PCF11-204ENST00000530660 PLSCR2Q9NRY7 297 aa12.34□□□□□ -0.43
PCF11-204ENST00000530660 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.34□□□□□ -0.43
PCF11-204ENST00000530660 TMEM106BQ9NUM4 274 aa12.34□□□□□ -0.43
PCF11-204ENST00000530660 IGLON5A6NGN9 336 aa12.34□□□□□ -0.43
PCF11-204ENST00000530660 H7BYZ3 331 aa12.34□□□□□ -0.43
PCF11-204ENST00000530660 PRSS41Q7RTY9 318 aa12.34□□□□□ -0.43
PCF11-204ENST00000530660 TGIF2LYQ8IUE0 185 aa12.34□□□□□ -0.43
PCF11-204ENST00000530660 SFTPA1Q8IWL2 248 aa12.34□□□□□ -0.43
PCF11-204ENST00000530660 IFI44Q8TCB0 444 aa12.34□□□□□ -0.43
PCF11-204ENST00000530660 ORAOV1Q8WV07 137 aa12.34□□□□□ -0.43
PCF11-204ENST00000530660 PGAM5Q96HS1 289 aa12.34□□□□□ -0.43
PCF11-204ENST00000530660 TMEM59Q9BXS4 323 aa12.34□□□□□ -0.43
PCF11-204ENST00000530660 CENPMQ9NSP4 180 aa12.34□□□□□ -0.43
PCF11-204ENST00000530660 THSD7BQ9C0I4 1608 aa12.34□□□□□ -0.43
PCF11-204ENST00000530660 TRAV34A0A0B4J273 112 aa12.34□□□□□ -0.43
PCF11-204ENST00000530660 SRSF10O75494 262 aaKnown RBP12.34□□□□□ -0.43
PCF11-204ENST00000530660 RAC2P15153 192 aa12.34□□□□□ -0.43
PCF11-204ENST00000530660 IL13RA2Q14627 380 aa12.34□□□□□ -0.43
PCF11-204ENST00000530660 PRICKLE4Q2TBC4 344 aa12.34□□□□□ -0.43
PCF11-204ENST00000530660 FAM180AQ6UWF9 173 aa12.34□□□□□ -0.43
PCF11-204ENST00000530660 LGI3Q8N145 548 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms