RNA–Protein interactions for RNA: ENST00000524288.1

SKP1-213, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-213ENST00000524288 ARMC7Q9H6L4 198 aa3.87□□□□□ -1.79
SKP1-213ENST00000524288 C8orf33Q9H7E9 229 aaPredicted RBP3.87□□□□□ -1.79
SKP1-213ENST00000524288 PARVBQ9HBI1 364 aa3.87□□□□□ -1.79
SKP1-213ENST00000524288 DDIT4Q9NX09 232 aa3.87□□□□□ -1.79
SKP1-213ENST00000524288 PCTPQ9UKL6 214 aa3.87□□□□□ -1.79
SKP1-213ENST00000524288 BTRCQ9Y297 605 aa3.87□□□□□ -1.79
SKP1-213ENST00000524288 OBSL1O75147 1896 aa3.87□□□□□ -1.79
SKP1-213ENST00000524288 KIAA1549LQ6ZVL6 1849 aa3.86□□□□□ -1.79
SKP1-213ENST00000524288 C1orf232A0A0U1RR37 186 aa3.86□□□□□ -1.79
SKP1-213ENST00000524288 METTL15A6NJ78 407 aa3.86□□□□□ -1.79
SKP1-213ENST00000524288 LYRM9A8MSI8 78 aa3.86□□□□□ -1.79
SKP1-213ENST00000524288 SYCE1LA8MT33 242 aa3.86□□□□□ -1.79
SKP1-213ENST00000524288 K7EMT4 169 aa3.86□□□□□ -1.79
SKP1-213ENST00000524288 SCAMP2O15127 329 aaKnown RBP3.86□□□□□ -1.79
SKP1-213ENST00000524288 SIVA1O15304 175 aa3.86□□□□□ -1.79
SKP1-213ENST00000524288 TPST1O60507 370 aa3.86□□□□□ -1.79
SKP1-213ENST00000524288 RDH16O75452 317 aa3.86□□□□□ -1.79
SKP1-213ENST00000524288 UPK1BO75841 260 aa3.86□□□□□ -1.79
SKP1-213ENST00000524288 IFNW1P05000 195 aa3.86□□□□□ -1.79
SKP1-213ENST00000524288 ARG1P05089 322 aa3.86□□□□□ -1.79
SKP1-213ENST00000524288 EIF4EP06730 217 aaKnown RBP3.86□□□□□ -1.79
SKP1-213ENST00000524288 TRAPPC2P0DI81 140 aa3.86□□□□□ -1.79
SKP1-213ENST00000524288 TRAPPC2BP0DI82 140 aa3.86□□□□□ -1.79
SKP1-213ENST00000524288 SMIM10L1P0DMW3 83 aa3.86□□□□□ -1.79
SKP1-213ENST00000524288 OR5H8P0DN80 308 aa3.86□□□□□ -1.79
SKP1-213ENST00000524288 CYBAP13498 195 aa3.86□□□□□ -1.79
SKP1-213ENST00000524288 ZNF136P52737 540 aa3.86□□□□□ -1.79
SKP1-213ENST00000524288 ZNF140P52738 457 aaPredicted RBP3.86□□□□□ -1.79
SKP1-213ENST00000524288 STC1P52823 247 aa3.86□□□□□ -1.79
SKP1-213ENST00000524288 FOXA1P55317 472 aa3.86□□□□□ -1.79
SKP1-213ENST00000524288 CLDN8P56748 225 aa3.86□□□□□ -1.79
SKP1-213ENST00000524288 IFITM2Q01629 132 aa3.86□□□□□ -1.79
SKP1-213ENST00000524288 PRKCDQ05655 676 aa3.86□□□□□ -1.79
SKP1-213ENST00000524288 MAB21L1Q13394 359 aa3.86□□□□□ -1.79
SKP1-213ENST00000524288 OR7A5Q15622 319 aa3.86□□□□□ -1.79
SKP1-213ENST00000524288 MLIPQ5VWP3 458 aa3.86□□□□□ -1.79
SKP1-213ENST00000524288 THOC7Q6I9Y2 204 aaKnown RBP3.86□□□□□ -1.79
SKP1-213ENST00000524288 GLYATQ6IB77 296 aa3.86□□□□□ -1.79
SKP1-213ENST00000524288 LYPD2Q6UXB3 125 aa3.86□□□□□ -1.79
SKP1-213ENST00000524288 RPS27LQ71UM5 84 aaKnown RBP3.86□□□□□ -1.79
SKP1-213ENST00000524288 C6orf120Q7Z4R8 191 aa3.86□□□□□ -1.79
SKP1-213ENST00000524288 SNX20Q7Z614 316 aa3.86□□□□□ -1.79
SKP1-213ENST00000524288 TMEM150AQ86TG1 271 aa3.86□□□□□ -1.79
SKP1-213ENST00000524288 SLC34A3Q8N130 599 aa3.86□□□□□ -1.79
SKP1-213ENST00000524288 BPIFB6Q8NFQ5 453 aa3.86□□□□□ -1.79
SKP1-213ENST00000524288 OR56A4Q8NGH8 313 aa3.86□□□□□ -1.79
SKP1-213ENST00000524288 OR2A1Q8NGT9 310 aa3.86□□□□□ -1.79
SKP1-213ENST00000524288 CD300LFQ8TDQ1 290 aa3.86□□□□□ -1.79
SKP1-213ENST00000524288 ZFP90Q8TF47 636 aa3.86□□□□□ -1.79
SKP1-213ENST00000524288 CA5BP1Q8WTZ4 195 aa3.86□□□□□ -1.79
SKP1-213ENST00000524288 LRRC29Q8WV35 223 aa3.86□□□□□ -1.79
SKP1-213ENST00000524288 SMIM10Q96HG1 83 aa3.86□□□□□ -1.79
SKP1-213ENST00000524288 TPK1Q9H3S4 243 aa3.86□□□□□ -1.79
SKP1-213ENST00000524288 DSN1Q9H410 356 aa3.86□□□□□ -1.79
SKP1-213ENST00000524288 RGS18Q9NS28 235 aa3.86□□□□□ -1.79
SKP1-213ENST00000524288 FKBP14Q9NWM8 211 aa3.86□□□□□ -1.79
SKP1-213ENST00000524288 C3orf18Q9UK00 162 aa3.86□□□□□ -1.79
SKP1-213ENST00000524288 FIS1Q9Y3D6 152 aa3.86□□□□□ -1.79
SKP1-213ENST00000524288 RHBDD3Q9Y3P4 386 aa3.86□□□□□ -1.79
SKP1-213ENST00000524288 PLXNA2O75051 1894 aa3.86□□□□□ -1.79
SKP1-213ENST00000524288 DENND4AQ7Z401 1863 aa3.86□□□□□ -1.79
SKP1-213ENST00000524288 DENND4CQ5VZ89 1909 aa3.85□□□□□ -1.79
SKP1-213ENST00000524288 PCM1Q15154 2024 aa3.85□□□□□ -1.79
SKP1-213ENST00000524288 TET2Q6N021 2002 aaPredicted RBP3.85□□□□□ -1.79
SKP1-213ENST00000524288 BPTFQ12830 3046 aa3.85□□□□□ -1.79
SKP1-213ENST00000524288 LOC100130705A0A1B0GUX0 176 aa3.85□□□□□ -1.79
SKP1-213ENST00000524288 WI2-2373I1.2A0A1W2PRP0 233 aa3.85□□□□□ -1.79
SKP1-213ENST00000524288 G3V2T6 193 aa3.85□□□□□ -1.79
SKP1-213ENST00000524288 DFFAO00273 331 aa3.85□□□□□ -1.79
SKP1-213ENST00000524288 BCKDKO14874 412 aa3.85□□□□□ -1.79
SKP1-213ENST00000524288 PRPS2P11908 318 aa3.85□□□□□ -1.79
SKP1-213ENST00000524288 CCL5P13501 91 aa3.85□□□□□ -1.79
SKP1-213ENST00000524288 CSNK2A2P19784 350 aaPredicted RBP3.85□□□□□ -1.79
SKP1-213ENST00000524288 SERPINB1P30740 379 aa3.85□□□□□ -1.79
SKP1-213ENST00000524288 DRD3P35462 400 aa3.85□□□□□ -1.79
SKP1-213ENST00000524288 CEACAM3P40198 252 aa3.85□□□□□ -1.79
SKP1-213ENST00000524288 CEACAM6P40199 344 aa3.85□□□□□ -1.79
SKP1-213ENST00000524288 CYB561P49447 251 aa3.85□□□□□ -1.79
SKP1-213ENST00000524288 GZMMP51124 257 aa3.85□□□□□ -1.79
SKP1-213ENST00000524288 RAB7AP51149 207 aa3.85□□□□□ -1.79
SKP1-213ENST00000524288 MAP3K7CLP57077 242 aa3.85□□□□□ -1.79
SKP1-213ENST00000524288 RPS15AP62244 130 aaKnown RBP3.85□□□□□ -1.79
SKP1-213ENST00000524288 HMGCS1Q01581 520 aa3.85□□□□□ -1.79
SKP1-213ENST00000524288 EMX1Q04741 257 aaPredicted RBP3.85□□□□□ -1.79
SKP1-213ENST00000524288 KRR1Q13601 381 aaKnown RBP3.85□□□□□ -1.79
SKP1-213ENST00000524288 POU2AF1Q16633 256 aa3.85□□□□□ -1.79
SKP1-213ENST00000524288 LCE3AQ5TA76 89 aa3.85□□□□□ -1.79
SKP1-213ENST00000524288 HES5Q5TA89 166 aa3.85□□□□□ -1.79
SKP1-213ENST00000524288 KDM4DQ6B0I6 523 aa3.85□□□□□ -1.79
SKP1-213ENST00000524288 ANGPTL8Q6UXH0 198 aa3.85□□□□□ -1.79
SKP1-213ENST00000524288 TEX43Q6ZNM6 134 aa3.85□□□□□ -1.79
SKP1-213ENST00000524288 AKAP14Q86UN6 197 aa3.85□□□□□ -1.79
SKP1-213ENST00000524288 MSRB3Q8IXL7 192 aa3.85□□□□□ -1.79
SKP1-213ENST00000524288 MKXQ8IYA7 352 aa3.85□□□□□ -1.79
SKP1-213ENST00000524288 JAGN1Q8N5M9 183 aa3.85□□□□□ -1.79
SKP1-213ENST00000524288 OR10J6PQ8NGY7 276 aa3.85□□□□□ -1.79
SKP1-213ENST00000524288 LILRB4Q8NHJ6 448 aa3.85□□□□□ -1.79
SKP1-213ENST00000524288 NDNFQ8TB73 568 aa3.85□□□□□ -1.79
SKP1-213ENST00000524288 ITFG1Q8TB96 612 aa3.85□□□□□ -1.79
SKP1-213ENST00000524288 STAG3L4Q8TBR4 150 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms