RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 IGKV1D-33P01593 117 aa10.67□□□□□ -0.7
NKX3-1-202ENST00000523261 IGKV1-33P01594 117 aa10.67□□□□□ -0.7
NKX3-1-202ENST00000523261 IGHA1P01876 353 aa10.67□□□□□ -0.7
NKX3-1-202ENST00000523261 OR8U9P0C7N5 309 aa10.67□□□□□ -0.7
NKX3-1-202ENST00000523261 PEX2P28328 305 aa10.67□□□□□ -0.7
NKX3-1-202ENST00000523261 SLURP1P55000 103 aa10.67□□□□□ -0.7
NKX3-1-202ENST00000523261 HAPLN4Q86UW8 402 aa10.67□□□□□ -0.7
NKX3-1-202ENST00000523261 TGIF2LXQ8IUE1 241 aa10.67□□□□□ -0.7
NKX3-1-202ENST00000523261 OR6K6Q8NGW6 343 aa10.67□□□□□ -0.7
NKX3-1-202ENST00000523261 HRASLS5Q96KN8 279 aa10.67□□□□□ -0.7
NKX3-1-202ENST00000523261 NMNAT2Q9BZQ4 307 aa10.67□□□□□ -0.7
NKX3-1-202ENST00000523261 KLK15Q9H2R5 256 aa10.67□□□□□ -0.7
NKX3-1-202ENST00000523261 GAL3ST2Q9H3Q3 398 aa10.67□□□□□ -0.7
NKX3-1-202ENST00000523261 LIN7CQ9NUP9 197 aaKnown RBP10.67□□□□□ -0.7
NKX3-1-202ENST00000523261 DCAF13Q9NV06 445 aaKnown RBP10.67□□□□□ -0.7
NKX3-1-202ENST00000523261 VSIG4Q9Y279 399 aa10.67□□□□□ -0.7
NKX3-1-202ENST00000523261 PKHD1P08F94 4074 aa10.67□□□□□ -0.7
NKX3-1-202ENST00000523261 A0A087X0M5 115 aa10.66□□□□□ -0.7
NKX3-1-202ENST00000523261 A0A1B0GX30 115 aa10.66□□□□□ -0.7
NKX3-1-202ENST00000523261 PQLC2LA1A4F0 135 aa10.66□□□□□ -0.7
NKX3-1-202ENST00000523261 MED14OSP0DP75 135 aa10.66□□□□□ -0.7
NKX3-1-202ENST00000523261 CLUP10909 449 aa10.66□□□□□ -0.7
NKX3-1-202ENST00000523261 SPI1P17947 270 aa10.66□□□□□ -0.7
NKX3-1-202ENST00000523261 VDAC1P21796 283 aa10.66□□□□□ -0.7
NKX3-1-202ENST00000523261 P2RX3P56373 397 aa10.66□□□□□ -0.7
NKX3-1-202ENST00000523261 DIAPH2-AS1Q14236 149 aa10.66□□□□□ -0.7
NKX3-1-202ENST00000523261 ZNF684Q5T5D7 378 aa10.66□□□□□ -0.7
NKX3-1-202ENST00000523261 LINC01590Q5TEZ4 76 aa10.66□□□□□ -0.7
NKX3-1-202ENST00000523261 LCN1P1Q5VSP4 162 aa10.66□□□□□ -0.7
NKX3-1-202ENST00000523261 OR6N2Q8NGY6 317 aa10.66□□□□□ -0.7
NKX3-1-202ENST00000523261 OR52J3Q8NH60 311 aa10.66□□□□□ -0.7
NKX3-1-202ENST00000523261 DHRS1Q96LJ7 313 aa10.66□□□□□ -0.7
NKX3-1-202ENST00000523261 KCTD7Q96MP8 289 aa10.66□□□□□ -0.7
NKX3-1-202ENST00000523261 NDUFAF4Q9P032 175 aa10.66□□□□□ -0.7
NKX3-1-202ENST00000523261 GMPR2Q9P2T1 348 aaKnown RBP10.66□□□□□ -0.7
NKX3-1-202ENST00000523261 DNAJB9Q9UBS3 223 aa10.66□□□□□ -0.7
NKX3-1-202ENST00000523261 BRI3O95415 125 aa10.65□□□□□ -0.7
NKX3-1-202ENST00000523261 NRASP01111 189 aa10.65□□□□□ -0.7
NKX3-1-202ENST00000523261 RHCEP18577 417 aa10.65□□□□□ -0.7
NKX3-1-202ENST00000523261 GABRR1P24046 479 aa10.65□□□□□ -0.7
NKX3-1-202ENST00000523261 ERP29P30040 261 aaKnown RBP10.65□□□□□ -0.7
NKX3-1-202ENST00000523261 GSSP48637 474 aa10.65□□□□□ -0.7
NKX3-1-202ENST00000523261 PSMA6P60900 246 aaKnown RBP10.65□□□□□ -0.7
NKX3-1-202ENST00000523261 RIPPLY1Q0D2K3 151 aa10.65□□□□□ -0.7
NKX3-1-202ENST00000523261 CRMP1Q14194 572 aa10.65□□□□□ -0.7
NKX3-1-202ENST00000523261 EBI3Q14213 229 aa10.65□□□□□ -0.7
NKX3-1-202ENST00000523261 TRPM8Q7Z2W7 1104 aa10.65□□□□□ -0.7
NKX3-1-202ENST00000523261 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.65□□□□□ -0.7
NKX3-1-202ENST00000523261 ERI1Q8IV48 349 aaKnown RBP10.65□□□□□ -0.7
NKX3-1-202ENST00000523261 Q8N9W7 124 aa10.65□□□□□ -0.7
NKX3-1-202ENST00000523261 ITFG2Q969R8 447 aa10.65□□□□□ -0.7
NKX3-1-202ENST00000523261 OR4C12Q96R67 309 aa10.65□□□□□ -0.7
NKX3-1-202ENST00000523261 INTS14Q96SY0 518 aa10.65□□□□□ -0.7
NKX3-1-202ENST00000523261 OR51J1Q9H342 316 aa10.65□□□□□ -0.7
NKX3-1-202ENST00000523261 NKIRAS1Q9NYS0 192 aa10.65□□□□□ -0.7
NKX3-1-202ENST00000523261 TAS2R3Q9NYW6 316 aa10.65□□□□□ -0.7
NKX3-1-202ENST00000523261 ACTR3BQ9P1U1 418 aa10.65□□□□□ -0.7
NKX3-1-202ENST00000523261 SLC7A11Q9UPY5 501 aa10.65□□□□□ -0.7
NKX3-1-202ENST00000523261 FAM32AQ9Y421 112 aaKnown RBP10.65□□□□□ -0.7
NKX3-1-202ENST00000523261 TRGV10A0A0A0MS01 117 aa10.64□□□□□ -0.71
NKX3-1-202ENST00000523261 A0A0U1RQV5 110 aa10.64□□□□□ -0.71
NKX3-1-202ENST00000523261 NCBP2LA6PVI3 153 aaKnown RBP10.64□□□□□ -0.71
NKX3-1-202ENST00000523261 MGST3O14880 152 aa10.64□□□□□ -0.71
NKX3-1-202ENST00000523261 DIRAS1O95057 198 aa10.64□□□□□ -0.71
NKX3-1-202ENST00000523261 NPPAP01160 153 aa10.64□□□□□ -0.71
NKX3-1-202ENST00000523261 IGLV1-51P01701 117 aa10.64□□□□□ -0.71
NKX3-1-202ENST00000523261 ATP6V1B1P15313 513 aa10.64□□□□□ -0.71
NKX3-1-202ENST00000523261 BLVRAP53004 296 aa10.64□□□□□ -0.71
NKX3-1-202ENST00000523261 IL24Q13007 206 aa10.64□□□□□ -0.71
NKX3-1-202ENST00000523261 ASRGL1Q7L266 308 aa10.64□□□□□ -0.71
NKX3-1-202ENST00000523261 ANGPTL5Q86XS5 388 aa10.64□□□□□ -0.71
NKX3-1-202ENST00000523261 OR8H3Q8N146 312 aa10.64□□□□□ -0.71
NKX3-1-202ENST00000523261 Q8N6K4 173 aa10.64□□□□□ -0.71
NKX3-1-202ENST00000523261 RNF148Q8N7C7 305 aa10.64□□□□□ -0.71
NKX3-1-202ENST00000523261 CORO2AQ92828 525 aa10.64□□□□□ -0.71
NKX3-1-202ENST00000523261 EAF1Q96JC9 268 aaPredicted RBP10.64□□□□□ -0.71
NKX3-1-202ENST00000523261 HSPB9Q9BQS6 159 aa10.64□□□□□ -0.71
NKX3-1-202ENST00000523261 PKIBQ9C010 78 aa10.64□□□□□ -0.71
NKX3-1-202ENST00000523261 ALX4Q9H161 411 aaPredicted RBP10.64□□□□□ -0.71
NKX3-1-202ENST00000523261 EGLN3Q9H6Z9 239 aa10.64□□□□□ -0.71
NKX3-1-202ENST00000523261 TUBA4BQ9H853 241 aa10.64□□□□□ -0.71
NKX3-1-202ENST00000523261 SEBOXQ9HB31 216 aaPredicted RBP10.64□□□□□ -0.71
NKX3-1-202ENST00000523261 CHCHD3Q9NX63 227 aaKnown RBP10.64□□□□□ -0.71
NKX3-1-202ENST00000523261 MTCH1Q9NZJ7 389 aa10.64□□□□□ -0.71
NKX3-1-202ENST00000523261 IL36RNQ9UBH0 155 aa10.64□□□□□ -0.71
NKX3-1-202ENST00000523261 ENPP5Q9UJA9 477 aa10.64□□□□□ -0.71
NKX3-1-202ENST00000523261 ZNF580Q9UK33 172 aa10.64□□□□□ -0.71
NKX3-1-202ENST00000523261 PIGLQ9Y2B2 252 aa10.64□□□□□ -0.71
NKX3-1-202ENST00000523261 U3KQV3 271 aa10.64□□□□□ -0.71
NKX3-1-202ENST00000523261 LINC01619G3V211 115 aa10.63□□□□□ -0.71
NKX3-1-202ENST00000523261 CXCR6O00574 342 aa10.63□□□□□ -0.71
NKX3-1-202ENST00000523261 HAND1O96004 215 aa10.63□□□□□ -0.71
NKX3-1-202ENST00000523261 IGF1P05019 195 aa10.63□□□□□ -0.71
NKX3-1-202ENST00000523261 OR3A1P47881 315 aa10.63□□□□□ -0.71
NKX3-1-202ENST00000523261 ZP1P60852 638 aa10.63□□□□□ -0.71
NKX3-1-202ENST00000523261 PITPNAQ00169 270 aa10.63□□□□□ -0.71
NKX3-1-202ENST00000523261 SLX4IPQ5VYV7 408 aa10.63□□□□□ -0.71
NKX3-1-202ENST00000523261 LINC00322Q6ZN03 302 aaPredicted RBP10.63□□□□□ -0.71
NKX3-1-202ENST00000523261 SHFQ7M4L6 423 aa10.63□□□□□ -0.71
NKX3-1-202ENST00000523261 PGAM4Q8N0Y7 254 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms