RNA–Protein interactions for RNA: ENST00000522854.5

CSGALNACT1-211, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 1,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-211ENST00000522854 PMELP40967 661 aa12.73□□□□□ -0.37
CSGALNACT1-211ENST00000522854 GNG2P59768 71 aa12.73□□□□□ -0.37
CSGALNACT1-211ENST00000522854 SELENOVP59797 346 aa12.73□□□□□ -0.37
CSGALNACT1-211ENST00000522854 MRPS10P82664 201 aaKnown RBP12.73□□□□□ -0.37
CSGALNACT1-211ENST00000522854 IKZF1Q13422 519 aa12.73□□□□□ -0.37
CSGALNACT1-211ENST00000522854 ARFRP1Q13795 201 aa12.73□□□□□ -0.37
CSGALNACT1-211ENST00000522854 ELP2Q6IA86 826 aa12.73□□□□□ -0.37
CSGALNACT1-211ENST00000522854 SSX8Q7RTT4 187 aa12.73□□□□□ -0.37
CSGALNACT1-211ENST00000522854 MOGAT3Q86VF5 341 aa12.73□□□□□ -0.37
CSGALNACT1-211ENST00000522854 NRIP2Q9BQI9 281 aa12.73□□□□□ -0.37
CSGALNACT1-211ENST00000522854 HRASLSQ9HDD0 168 aa12.73□□□□□ -0.37
CSGALNACT1-211ENST00000522854 FAIMQ9NVQ4 179 aa12.73□□□□□ -0.37
CSGALNACT1-211ENST00000522854 MCUBQ9NWR8 336 aa12.73□□□□□ -0.37
CSGALNACT1-211ENST00000522854 CISD1Q9NZ45 108 aaKnown RBP12.73□□□□□ -0.37
CSGALNACT1-211ENST00000522854 AK3Q9UIJ7 227 aa12.73□□□□□ -0.37
CSGALNACT1-211ENST00000522854 NOP16Q9Y3C1 178 aaKnown RBP12.73□□□□□ -0.37
CSGALNACT1-211ENST00000522854 TACC2O95359 2948 aa12.73□□□□□ -0.37
CSGALNACT1-211ENST00000522854 M0QYG6 137 aa12.72□□□□□ -0.37
CSGALNACT1-211ENST00000522854 HS3ST1O14792 307 aa12.72□□□□□ -0.37
CSGALNACT1-211ENST00000522854 ZNF205O95201 554 aa12.72□□□□□ -0.37
CSGALNACT1-211ENST00000522854 EGR1P18146 543 aa12.72□□□□□ -0.37
CSGALNACT1-211ENST00000522854 ERVK11-1P61568 191 aa12.72□□□□□ -0.37
CSGALNACT1-211ENST00000522854 BEX5Q5H9J7 111 aa12.72□□□□□ -0.37
CSGALNACT1-211ENST00000522854 FAM201AQ5SY85 155 aa12.72□□□□□ -0.37
CSGALNACT1-211ENST00000522854 BOLLQ8N9W6 283 aaKnown RBP12.72□□□□□ -0.37
CSGALNACT1-211ENST00000522854 C15orf40Q8WUR7 153 aa12.72□□□□□ -0.37
CSGALNACT1-211ENST00000522854 FBXW5Q969U6 566 aa12.72□□□□□ -0.37
CSGALNACT1-211ENST00000522854 MEGF10Q96KG7 1140 aa12.72□□□□□ -0.37
CSGALNACT1-211ENST00000522854 DCAF16Q9NXF7 216 aa12.72□□□□□ -0.37
CSGALNACT1-211ENST00000522854 ING3Q9NXR8 418 aa12.72□□□□□ -0.37
CSGALNACT1-211ENST00000522854 RABL2AQ9UBK7 228 aaPredicted RBP12.72□□□□□ -0.37
CSGALNACT1-211ENST00000522854 RABL2BQ9UNT1 228 aa12.72□□□□□ -0.37
CSGALNACT1-211ENST00000522854 DYSFO75923 2080 aa12.72□□□□□ -0.37
CSGALNACT1-211ENST00000522854 AKAP6Q13023 2319 aa12.72□□□□□ -0.37
CSGALNACT1-211ENST00000522854 FAM208BQ5VWN6 2430 aa12.72□□□□□ -0.37
CSGALNACT1-211ENST00000522854 A0A1W2PPR1 153 aa12.72□□□□□ -0.37
CSGALNACT1-211ENST00000522854 SCGNO76038 276 aa12.72□□□□□ -0.37
CSGALNACT1-211ENST00000522854 NXPH2O95156 264 aa12.72□□□□□ -0.37
CSGALNACT1-211ENST00000522854 CSN2P05814 226 aa12.72□□□□□ -0.37
CSGALNACT1-211ENST00000522854 GIFP27352 417 aa12.72□□□□□ -0.37
CSGALNACT1-211ENST00000522854 RAB25P57735 213 aa12.72□□□□□ -0.37
CSGALNACT1-211ENST00000522854 CARTPTQ16568 116 aa12.72□□□□□ -0.37
CSGALNACT1-211ENST00000522854 Q6ZPA2 131 aa12.72□□□□□ -0.37
CSGALNACT1-211ENST00000522854 C5orf24Q7Z6I8 188 aa12.72□□□□□ -0.37
CSGALNACT1-211ENST00000522854 OR5T2Q8NGG2 359 aa12.72□□□□□ -0.37
CSGALNACT1-211ENST00000522854 OR4C16Q8NGL9 310 aa12.72□□□□□ -0.37
CSGALNACT1-211ENST00000522854 ENKURQ8TC29 256 aa12.72□□□□□ -0.37
CSGALNACT1-211ENST00000522854 SNAPC3Q92966 411 aa12.72□□□□□ -0.37
CSGALNACT1-211ENST00000522854 MRPS24Q96EL2 167 aaKnown RBP12.72□□□□□ -0.37
CSGALNACT1-211ENST00000522854 NUDT16L1Q9BRJ7 211 aaKnown RBP12.72□□□□□ -0.37
CSGALNACT1-211ENST00000522854 ST6GALNAC5Q9BVH7 336 aa12.72□□□□□ -0.37
CSGALNACT1-211ENST00000522854 TINAGL1Q9GZM7 467 aaPredicted RBP12.72□□□□□ -0.37
CSGALNACT1-211ENST00000522854 TLNRD1Q9H1K6 362 aa12.72□□□□□ -0.37
CSGALNACT1-211ENST00000522854 OR14J1Q9UGF5 321 aa12.72□□□□□ -0.37
CSGALNACT1-211ENST00000522854 POLDIP2Q9Y2S7 368 aa12.72□□□□□ -0.37
CSGALNACT1-211ENST00000522854 LRRK2Q5S007 2527 aa12.72□□□□□ -0.37
CSGALNACT1-211ENST00000522854 IGKV1D-8A0A087WSZ0 117 aa12.71□□□□□ -0.37
CSGALNACT1-211ENST00000522854 FAM240BA0A1B0GVZ2 78 aa12.71□□□□□ -0.37
CSGALNACT1-211ENST00000522854 TPPPO94811 219 aa12.71□□□□□ -0.37
CSGALNACT1-211ENST00000522854 GSTP1P09211 210 aaKnown RBP12.71□□□□□ -0.37
CSGALNACT1-211ENST00000522854 CD200P41217 278 aa12.71□□□□□ -0.37
CSGALNACT1-211ENST00000522854 TNFAIP6P98066 277 aaPredicted RBP12.71□□□□□ -0.37
CSGALNACT1-211ENST00000522854 MST1LQ2TV78 715 aa12.71□□□□□ -0.37
CSGALNACT1-211ENST00000522854 OR56B4Q8NH76 319 aa12.71□□□□□ -0.37
CSGALNACT1-211ENST00000522854 LRRC29Q8WV35 223 aa12.71□□□□□ -0.37
CSGALNACT1-211ENST00000522854 RDH5Q92781 318 aa12.71□□□□□ -0.37
CSGALNACT1-211ENST00000522854 UPRTQ96BW1 309 aa12.71□□□□□ -0.37
CSGALNACT1-211ENST00000522854 ZNF701Q9NV72 531 aaPredicted RBP12.71□□□□□ -0.37
CSGALNACT1-211ENST00000522854 VPS13CQ709C8 3753 aa12.71□□□□□ -0.37
CSGALNACT1-211ENST00000522854 PDCD6O75340 191 aa12.7□□□□□ -0.38
CSGALNACT1-211ENST00000522854 PTBP3O95758 552 aaKnown RBP12.7□□□□□ -0.38
CSGALNACT1-211ENST00000522854 SPERTQ8NA61 448 aa12.7□□□□□ -0.38
CSGALNACT1-211ENST00000522854 SCPEP1Q9HB40 452 aa12.7□□□□□ -0.38
CSGALNACT1-211ENST00000522854 CSMD2Q7Z408 3487 aa12.7□□□□□ -0.38
CSGALNACT1-211ENST00000522854 ASH1LQ9NR48 2969 aaKnown RBP12.7□□□□□ -0.38
CSGALNACT1-211ENST00000522854 IGHV3OR15-7A0A075B7D8 119 aa12.7□□□□□ -0.38
CSGALNACT1-211ENST00000522854 TRAV24A0A0B4J272 114 aa12.7□□□□□ -0.38
CSGALNACT1-211ENST00000522854 M0R233 179 aa12.7□□□□□ -0.38
CSGALNACT1-211ENST00000522854 SIRPB1O00241 398 aa12.7□□□□□ -0.38
CSGALNACT1-211ENST00000522854 AGAP20933 346 aa12.7□□□□□ -0.38
CSGALNACT1-211ENST00000522854 GLRA1P23415 457 aa12.7□□□□□ -0.38
CSGALNACT1-211ENST00000522854 SLC6A1P30531 599 aa12.7□□□□□ -0.38
CSGALNACT1-211ENST00000522854 RANBP1P43487 201 aa12.7□□□□□ -0.38
CSGALNACT1-211ENST00000522854 MZT2BQ6NZ67 158 aa12.7□□□□□ -0.38
CSGALNACT1-211ENST00000522854 MINDY2Q8NBR6 621 aa12.7□□□□□ -0.38
CSGALNACT1-211ENST00000522854 POC1AQ8NBT0 407 aa12.7□□□□□ -0.38
CSGALNACT1-211ENST00000522854 GCM1Q9NP62 436 aa12.7□□□□□ -0.38
CSGALNACT1-211ENST00000522854 IFT46Q9NQC8 304 aa12.7□□□□□ -0.38
CSGALNACT1-211ENST00000522854 PCDHB16Q9NRJ7 776 aa12.7□□□□□ -0.38
CSGALNACT1-211ENST00000522854 KIAA2026Q5HYC2 2103 aa12.69□□□□□ -0.38
CSGALNACT1-211ENST00000522854 TRAV6A0A075B6T7 132 aa12.69□□□□□ -0.38
CSGALNACT1-211ENST00000522854 C17orf100A8MU93 164 aa12.69□□□□□ -0.38
CSGALNACT1-211ENST00000522854 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.69□□□□□ -0.38
CSGALNACT1-211ENST00000522854 SULT1C2O00338 296 aa12.69□□□□□ -0.38
CSGALNACT1-211ENST00000522854 CYB5R3P00387 301 aaPredicted RBP12.69□□□□□ -0.38
CSGALNACT1-211ENST00000522854 PMP2P02689 132 aa12.69□□□□□ -0.38
CSGALNACT1-211ENST00000522854 CSF1P09603 554 aa12.69□□□□□ -0.38
CSGALNACT1-211ENST00000522854 ZNF44P15621 663 aa12.69□□□□□ -0.38
CSGALNACT1-211ENST00000522854 FUT3P21217 361 aa12.69□□□□□ -0.38
CSGALNACT1-211ENST00000522854 APOBEC3AP31941 199 aaPredicted RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms