RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 PILRAQ9UKJ1 303 aa14.34□□□□□ -0.11
USP42-207ENST00000521713 ELF5Q9UKW6 265 aaPredicted RBP14.34□□□□□ -0.11
USP42-207ENST00000521713 HRKO00198 91 aa14.34□□□□□ -0.11
USP42-207ENST00000521713 PGA3P0DJD8 388 aa14.34□□□□□ -0.11
USP42-207ENST00000521713 AKR1C3P42330 323 aa14.34□□□□□ -0.11
USP42-207ENST00000521713 MAMSTRQ6ZN01 415 aa14.34□□□□□ -0.11
USP42-207ENST00000521713 OR2M3Q8NG83 312 aa14.34□□□□□ -0.11
USP42-207ENST00000521713 ZNF596Q8TC21 504 aa14.34□□□□□ -0.11
USP42-207ENST00000521713 SLC35E1Q96K37 410 aa14.34□□□□□ -0.11
USP42-207ENST00000521713 ADGRL4Q9HBW9 690 aa14.34□□□□□ -0.11
USP42-207ENST00000521713 PSENENQ9NZ42 101 aa14.34□□□□□ -0.11
USP42-207ENST00000521713 CES1P1Q9UKY3 287 aa14.34□□□□□ -0.11
USP42-207ENST00000521713 RCL1Q9Y2P8 373 aaKnown RBP14.34□□□□□ -0.11
USP42-207ENST00000521713 A0A1W2PR77 199 aa14.34□□□□□ -0.11
USP42-207ENST00000521713 GALR2O43603 387 aaPredicted RBP14.34□□□□□ -0.11
USP42-207ENST00000521713 MPGP29372 298 aa14.34□□□□□ -0.11
USP42-207ENST00000521713 LTBRP36941 435 aa14.34□□□□□ -0.11
USP42-207ENST00000521713 MNX1P50219 401 aaPredicted RBP14.34□□□□□ -0.11
USP42-207ENST00000521713 SKP2Q13309 424 aa14.34□□□□□ -0.11
USP42-207ENST00000521713 GPR137Q96N19 417 aa14.34□□□□□ -0.11
USP42-207ENST00000521713 RAB1BQ9H0U4 201 aa14.34□□□□□ -0.11
USP42-207ENST00000521713 TRBV5-3A0A0A0MS03 114 aa14.33□□□□□ -0.11
USP42-207ENST00000521713 A0A1W2PR80 420 aa14.33□□□□□ -0.11
USP42-207ENST00000521713 ALKBH6Q3KRA9 238 aa14.33□□□□□ -0.11
USP42-207ENST00000521713 THSD4Q6ZMP0 1018 aa14.33□□□□□ -0.11
USP42-207ENST00000521713 ZNF721Q8TF20 911 aa14.33□□□□□ -0.11
USP42-207ENST00000521713 PELI1Q96FA3 418 aa14.33□□□□□ -0.11
USP42-207ENST00000521713 MS4A10Q96PG2 267 aa14.33□□□□□ -0.11
USP42-207ENST00000521713 MIOXQ9UGB7 285 aa14.33□□□□□ -0.11
USP42-207ENST00000521713 ICAM5Q9UMF0 924 aa14.33□□□□□ -0.11
USP42-207ENST00000521713 FAM221AA4D161 298 aa14.33□□□□□ -0.12
USP42-207ENST00000521713 ZNF250P15622 560 aa14.33□□□□□ -0.12
USP42-207ENST00000521713 PKIAP61925 76 aa14.33□□□□□ -0.12
USP42-207ENST00000521713 PLA1AQ53H76 456 aa14.33□□□□□ -0.12
USP42-207ENST00000521713 BHLHA15Q7RTS1 189 aaPredicted RBP14.33□□□□□ -0.12
USP42-207ENST00000521713 ZNF275Q9NSD4 429 aaPredicted RBP14.33□□□□□ -0.12
USP42-207ENST00000521713 BET1LQ9NYM9 111 aa14.33□□□□□ -0.12
USP42-207ENST00000521713 PPP1R3CQ9UQK1 317 aa14.33□□□□□ -0.12
USP42-207ENST00000521713 ASXL3Q9C0F0 2248 aa14.33□□□□□ -0.12
USP42-207ENST00000521713 HOXD4P09016 255 aaPredicted RBP14.33□□□□□ -0.12
USP42-207ENST00000521713 OR4S1Q8NGB4 309 aa14.33□□□□□ -0.12
USP42-207ENST00000521713 COMMD5Q9GZQ3 224 aa14.33□□□□□ -0.12
USP42-207ENST00000521713 MRPL22Q9NWU5 206 aaKnown RBP14.33□□□□□ -0.12
USP42-207ENST00000521713 FLRT3Q9NZU0 649 aa14.33□□□□□ -0.12
USP42-207ENST00000521713 XKRY2A2RUG3 117 aa14.33□□□□□ -0.12
USP42-207ENST00000521713 CT45A10P0DMU9 189 aa14.33□□□□□ -0.12
USP42-207ENST00000521713 ASB10Q8WXI3 467 aa14.33□□□□□ -0.12
USP42-207ENST00000521713 ZDHHC16Q969W1 377 aa14.33□□□□□ -0.12
USP42-207ENST00000521713 TINAGL1Q9GZM7 467 aaPredicted RBP14.33□□□□□ -0.12
USP42-207ENST00000521713 MMP24Q9Y5R2 645 aa14.33□□□□□ -0.12
USP42-207ENST00000521713 OR5B21A6NL26 309 aa14.32□□□□□ -0.12
USP42-207ENST00000521713 ST8SIA5O15466 376 aa14.32□□□□□ -0.12
USP42-207ENST00000521713 RPS16P62249 146 aaKnown RBP14.32□□□□□ -0.12
USP42-207ENST00000521713 KHDC1LQ5JSQ8 128 aa14.32□□□□□ -0.12
USP42-207ENST00000521713 OVCH2Q7RTZ1 564 aa14.32□□□□□ -0.12
USP42-207ENST00000521713 TRMT61AQ96FX7 289 aaKnown RBP14.32□□□□□ -0.12
USP42-207ENST00000521713 SIRT7Q9NRC8 400 aa14.32□□□□□ -0.12
USP42-207ENST00000521713 ZNF107Q9UII5 783 aaPredicted RBP14.32□□□□□ -0.12
USP42-207ENST00000521713 MPC1Q9Y5U8 109 aa14.32□□□□□ -0.12
USP42-207ENST00000521713 SPRY1O43609 319 aaPredicted RBP14.32□□□□□ -0.12
USP42-207ENST00000521713 NGFRP08138 427 aa14.32□□□□□ -0.12
USP42-207ENST00000521713 IL13RA2Q14627 380 aa14.32□□□□□ -0.12
USP42-207ENST00000521713 TMEM241Q24JQ0 296 aa14.32□□□□□ -0.12
USP42-207ENST00000521713 EXTL1Q92935 676 aa14.32□□□□□ -0.12
USP42-207ENST00000521713 LPAR3Q9UBY5 353 aa14.32□□□□□ -0.12
USP42-207ENST00000521713 TPRP12270 2363 aaKnown RBP14.32□□□□□ -0.12
USP42-207ENST00000521713 CDC42EP2O14613 210 aa14.32□□□□□ -0.12
USP42-207ENST00000521713 NXPH3O95157 252 aa14.32□□□□□ -0.12
USP42-207ENST00000521713 PI3P19957 117 aa14.32□□□□□ -0.12
USP42-207ENST00000521713 TUSC5Q8IXB3 177 aa14.32□□□□□ -0.12
USP42-207ENST00000521713 TMEM52Q8NDY8 209 aa14.32□□□□□ -0.12
USP42-207ENST00000521713 SCARF2Q96GP6 870 aaPredicted RBP14.32□□□□□ -0.12
USP42-207ENST00000521713 NPAS1Q99742 590 aa14.32□□□□□ -0.12
USP42-207ENST00000521713 TMPRSS13Q9BYE2 586 aa14.32□□□□□ -0.12
USP42-207ENST00000521713 C9orf170A2RU37 121 aa14.32□□□□□ -0.12
USP42-207ENST00000521713 ZNF883P0CG24 379 aa14.32□□□□□ -0.12
USP42-207ENST00000521713 CA6P23280 308 aa14.32□□□□□ -0.12
USP42-207ENST00000521713 TNFAIP6P98066 277 aaPredicted RBP14.32□□□□□ -0.12
USP42-207ENST00000521713 PRDX4Q13162 271 aa14.32□□□□□ -0.12
USP42-207ENST00000521713 PTP4A1Q93096 173 aa14.32□□□□□ -0.12
USP42-207ENST00000521713 KISS1Q15726 138 aa14.31□□□□□ -0.12
USP42-207ENST00000521713 COX19Q49B96 90 aa14.31□□□□□ -0.12
USP42-207ENST00000521713 RAB1CQ92928 201 aa14.31□□□□□ -0.12
USP42-207ENST00000521713 GALR1P47211 349 aa14.31□□□□□ -0.12
USP42-207ENST00000521713 TMPRSS3P57727 454 aa14.31□□□□□ -0.12
USP42-207ENST00000521713 INPP5JQ15735 1006 aaPredicted RBP14.31□□□□□ -0.12
USP42-207ENST00000521713 CSRP2Q16527 193 aa14.31□□□□□ -0.12
USP42-207ENST00000521713 ABLIM2Q6H8Q1 611 aa14.31□□□□□ -0.12
USP42-207ENST00000521713 ADPRHL1Q8NDY3 354 aa14.31□□□□□ -0.12
USP42-207ENST00000521713 PRR7Q8TB68 274 aa14.31□□□□□ -0.12
USP42-207ENST00000521713 USF1P22415 310 aaPredicted RBP14.31□□□□□ -0.12
USP42-207ENST00000521713 RPL29P47914 159 aaKnown RBP14.31□□□□□ -0.12
USP42-207ENST00000521713 GABRA4P48169 554 aa14.31□□□□□ -0.12
USP42-207ENST00000521713 GUCA2AQ02747 115 aa14.31□□□□□ -0.12
USP42-207ENST00000521713 CLCF1Q9UBD9 225 aa14.31□□□□□ -0.12
USP42-207ENST00000521713 HLA-DRB3P79483 266 aa14.31□□□□□ -0.12
USP42-207ENST00000521713 ERHP84090 104 aaKnown RBP14.31□□□□□ -0.12
USP42-207ENST00000521713 C8orf82Q6P1X6 216 aaPredicted RBP14.31□□□□□ -0.12
USP42-207ENST00000521713 TAAR6Q96RI8 345 aa14.31□□□□□ -0.12
USP42-207ENST00000521713 ZFPL1O95159 310 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms