RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 OR13C9Q8NGT0 318 aa7.8□□□□□ -1.16
CLK4-209ENST00000521621 SPATA3Q8NHX4 192 aa7.8□□□□□ -1.16
CLK4-209ENST00000521621 PPP1R35Q8TAP8 253 aa7.8□□□□□ -1.16
CLK4-209ENST00000521621 TMEM158Q8WZ71 300 aa7.8□□□□□ -1.16
CLK4-209ENST00000521621 FOXRED1Q96CU9 486 aaPredicted RBP7.8□□□□□ -1.16
CLK4-209ENST00000521621 ACANP16112 2415 aa7.79□□□□□ -1.16
CLK4-209ENST00000521621 IGKV1-12A0A0C4DH73 117 aa7.79□□□□□ -1.16
CLK4-209ENST00000521621 FUOMA2VDF0 154 aa7.79□□□□□ -1.16
CLK4-209ENST00000521621 RFPL4AA6NLU0 287 aa7.79□□□□□ -1.16
CLK4-209ENST00000521621 RFPL4AL1F8VTS6 287 aa7.79□□□□□ -1.16
CLK4-209ENST00000521621 GABRPO00591 440 aa7.79□□□□□ -1.16
CLK4-209ENST00000521621 TOX4O94842 621 aa7.79□□□□□ -1.16
CLK4-209ENST00000521621 IGKV1D-12P01611 117 aa7.79□□□□□ -1.16
CLK4-209ENST00000521621 PRTN3P24158 256 aa7.79□□□□□ -1.16
CLK4-209ENST00000521621 DLX6P56179 175 aa7.79□□□□□ -1.16
CLK4-209ENST00000521621 PPP3R1P63098 170 aa7.79□□□□□ -1.16
CLK4-209ENST00000521621 METTL11BQ5VVY1 283 aa7.79□□□□□ -1.16
CLK4-209ENST00000521621 METTL8Q9H825 291 aaKnown RBP7.79□□□□□ -1.16
CLK4-209ENST00000521621 LINC00574Q9H8X3 128 aa7.79□□□□□ -1.16
CLK4-209ENST00000521621 HIVEP2P31629 2446 aa7.79□□□□□ -1.16
CLK4-209ENST00000521621 SH2D1BO14796 132 aa7.79□□□□□ -1.16
CLK4-209ENST00000521621 HAND1O96004 215 aa7.79□□□□□ -1.16
CLK4-209ENST00000521621 Q6P435 159 aa7.79□□□□□ -1.16
CLK4-209ENST00000521621 Q8N7P7 452 aa7.79□□□□□ -1.16
CLK4-209ENST00000521621 C19orf18Q8NEA5 215 aa7.79□□□□□ -1.16
CLK4-209ENST00000521621 TRMT10AQ8TBZ6 339 aaKnown RBP7.79□□□□□ -1.16
CLK4-209ENST00000521621 FAM216AQ8WUB2 273 aa7.79□□□□□ -1.16
CLK4-209ENST00000521621 FCGR1BQ92637 280 aa7.79□□□□□ -1.16
CLK4-209ENST00000521621 TNFRSF14Q92956 283 aa7.79□□□□□ -1.16
CLK4-209ENST00000521621 EMG1Q92979 244 aaKnown RBP7.79□□□□□ -1.16
CLK4-209ENST00000521621 SLAMF9Q96A28 289 aa7.79□□□□□ -1.16
CLK4-209ENST00000521621 TAS2R4Q9NYW5 299 aa7.79□□□□□ -1.16
CLK4-209ENST00000521621 UBE2J1Q9Y385 318 aaPredicted RBP7.79□□□□□ -1.16
CLK4-209ENST00000521621 MGST3O14880 152 aa7.78□□□□□ -1.16
CLK4-209ENST00000521621 UCHL1P09936 223 aa7.78□□□□□ -1.16
CLK4-209ENST00000521621 BCL3P20749 454 aa7.78□□□□□ -1.16
CLK4-209ENST00000521621 COMPP49747 757 aaPredicted RBP7.78□□□□□ -1.16
CLK4-209ENST00000521621 BLMHQ13867 455 aa7.78□□□□□ -1.16
CLK4-209ENST00000521621 MIDNQ504T8 468 aa7.78□□□□□ -1.16
CLK4-209ENST00000521621 UBE2UQ5VVX9 321 aa7.78□□□□□ -1.16
CLK4-209ENST00000521621 SVOPQ8N4V2 548 aa7.78□□□□□ -1.16
CLK4-209ENST00000521621 ST8SIA4Q92187 359 aa7.78□□□□□ -1.16
CLK4-209ENST00000521621 UFD1Q92890 307 aa7.78□□□□□ -1.16
CLK4-209ENST00000521621 SF3B6Q9Y3B4 125 aaKnown RBP7.78□□□□□ -1.16
CLK4-209ENST00000521621 LRRC42Q9Y546 428 aa7.78□□□□□ -1.16
CLK4-209ENST00000521621 POMT1Q9Y6A1 747 aa7.78□□□□□ -1.16
CLK4-209ENST00000521621 ABCA1O95477 2261 aa7.78□□□□□ -1.16
CLK4-209ENST00000521621 IGHV1-69DA0A0B4J2H0 117 aa7.78□□□□□ -1.16
CLK4-209ENST00000521621 hCG_1809904A0A1W2PP81 198 aa7.78□□□□□ -1.16
CLK4-209ENST00000521621 A0A1W2PPE2 198 aa7.78□□□□□ -1.16
CLK4-209ENST00000521621 A0A1W2PR64 198 aa7.78□□□□□ -1.16
CLK4-209ENST00000521621 A0A1W2PRV1 198 aa7.78□□□□□ -1.16
CLK4-209ENST00000521621 POM121CA8CG34 1229 aa7.78□□□□□ -1.16
CLK4-209ENST00000521621 IGHV1-69P01742 117 aa7.78□□□□□ -1.16
CLK4-209ENST00000521621 UBBP0CG47 229 aa7.78□□□□□ -1.16
CLK4-209ENST00000521621 PTGFRP43088 359 aa7.78□□□□□ -1.16
CLK4-209ENST00000521621 UBE2E1P51965 193 aa7.78□□□□□ -1.16
CLK4-209ENST00000521621 COL10A1Q03692 680 aa7.78□□□□□ -1.16
CLK4-209ENST00000521621 MPV17LQ2QL34 196 aa7.78□□□□□ -1.16
CLK4-209ENST00000521621 C1orf100Q5SVJ3 147 aa7.78□□□□□ -1.16
CLK4-209ENST00000521621 CD200R1LQ6Q8B3 271 aa7.78□□□□□ -1.16
CLK4-209ENST00000521621 C17orf107Q6ZR85 190 aa7.78□□□□□ -1.16
CLK4-209ENST00000521621 ZNF771Q7L3S4 317 aaPredicted RBP7.78□□□□□ -1.16
CLK4-209ENST00000521621 OR10A7Q8NGE5 316 aa7.78□□□□□ -1.16
CLK4-209ENST00000521621 OR51A2Q8NGJ7 313 aa7.78□□□□□ -1.16
CLK4-209ENST00000521621 EXOSC4Q9NPD3 245 aaKnown RBP7.78□□□□□ -1.16
CLK4-209ENST00000521621 TAS2R3Q9NYW6 316 aa7.78□□□□□ -1.16
CLK4-209ENST00000521621 LINC00312Q9Y6C7 94 aa7.78□□□□□ -1.16
CLK4-209ENST00000521621 CENPVL3A0A0U1RRI6 287 aa7.77□□□□□ -1.16
CLK4-209ENST00000521621 A0A1B0GW55 424 aa7.77□□□□□ -1.16
CLK4-209ENST00000521621 TMEM82A0PJX8 343 aa7.77□□□□□ -1.16
CLK4-209ENST00000521621 A6NIN4 97 aa7.77□□□□□ -1.16
CLK4-209ENST00000521621 F8VVB4 439 aa7.77□□□□□ -1.16
CLK4-209ENST00000521621 F8VWA3 439 aa7.77□□□□□ -1.16
CLK4-209ENST00000521621 HCKP08631 526 aa7.77□□□□□ -1.16
CLK4-209ENST00000521621 DUX4L2P0CJ85 424 aa7.77□□□□□ -1.16
CLK4-209ENST00000521621 DUX4L3P0CJ86 424 aa7.77□□□□□ -1.16
CLK4-209ENST00000521621 DUX4L4P0CJ87 422 aa7.77□□□□□ -1.16
CLK4-209ENST00000521621 DUX4L5P0CJ88 424 aa7.77□□□□□ -1.16
CLK4-209ENST00000521621 DUX4L6P0CJ89 424 aa7.77□□□□□ -1.16
CLK4-209ENST00000521621 DUX4L7P0CJ90 424 aa7.77□□□□□ -1.16
CLK4-209ENST00000521621 TGFBR2P37173 567 aa7.77□□□□□ -1.16
CLK4-209ENST00000521621 KCTD21Q4G0X4 260 aa7.77□□□□□ -1.16
CLK4-209ENST00000521621 DUX4L9Q6RFH8 374 aaPredicted RBP7.77□□□□□ -1.16
CLK4-209ENST00000521621 SLC16A12Q6ZSM3 486 aa7.77□□□□□ -1.16
CLK4-209ENST00000521621 C11orf42Q8N5U0 333 aa7.77□□□□□ -1.16
CLK4-209ENST00000521621 SEH1LQ96EE3 360 aa7.77□□□□□ -1.16
CLK4-209ENST00000521621 ZNF488Q96MN9 340 aa7.77□□□□□ -1.16
CLK4-209ENST00000521621 METTL9Q9H1A3 318 aa7.77□□□□□ -1.16
CLK4-209ENST00000521621 ACOT13Q9NPJ3 140 aa7.77□□□□□ -1.16
CLK4-209ENST00000521621 DUX4Q9UBX2 424 aa7.77□□□□□ -1.16
CLK4-209ENST00000521621 FBLN5Q9UBX5 448 aa7.77□□□□□ -1.16
CLK4-209ENST00000521621 ZANQ9Y493 2812 aa7.77□□□□□ -1.17
CLK4-209ENST00000521621 TRIM77I1YAP6 450 aa7.77□□□□□ -1.17
CLK4-209ENST00000521621 PIN1P1O15428 100 aa7.77□□□□□ -1.17
CLK4-209ENST00000521621 CELP19835 753 aa7.77□□□□□ -1.17
CLK4-209ENST00000521621 GABRA5P31644 462 aa7.77□□□□□ -1.17
CLK4-209ENST00000521621 ZNF93P35789 620 aaPredicted RBP7.77□□□□□ -1.17
CLK4-209ENST00000521621 RBMXP38159 391 aaKnown RBP7.77□□□□□ -1.17
CLK4-209ENST00000521621 NPBWR2P48146 333 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms