RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 HCAR1Q9BXC0 346 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 GPR61Q9BZJ8 451 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 NMNAT2Q9BZQ4 307 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 POLR2J2Q9GZM3 115 aaKnown RBP2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 OPN3Q9H1Y3 402 aaPredicted RBP2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 C1orf198Q9H425 327 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 REEP1Q9H902 201 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 TPT1P8Q9HAU6 139 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 CACYBPQ9HB71 228 aaKnown RBP2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 CRLF2Q9HC73 371 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 LHX9Q9NQ69 397 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 C19orf12Q9NSK7 152 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 ZNF282Q9UDV7 671 aaPredicted RBP2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 CRLS1Q9UJA2 301 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 ZNF222Q9UK12 451 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 FZR1Q9UM11 496 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 SLC22A14Q9Y267 594 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 CHTOPQ9Y3Y2 248 aaKnown RBP2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 TIMM10BQ9Y5J6 103 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 COL4A6Q14031 1691 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 GON4LQ3T8J9 2241 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 HEATR5BQ9P2D3 2071 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 IGHV3-35A0A0C4DH35 117 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 TRAPPC13A5PLN9 417 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 FBLL1A6NHQ2 334 aaKnown RBP2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 DISC1C4P0D8 188 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 C5orf58C9J3I9 102 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 C9JQL5 133 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 G3V3Y1 287 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 PRAMEF26H0Y7S4 382 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 H3BTX0 84 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 GABRPO00591 440 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 SLC17A2O00624 439 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 SCAMP2O15127 329 aaKnown RBP2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 EEF1E1O43324 174 aaKnown RBP2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 MBTPS2O43462 519 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 RP2O75695 350 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 DUSP14O95147 198 aaKnown RBP2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 NDUFA7O95182 113 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 ZNF682O95780 498 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 CATP04040 527 aaKnown RBP2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 CD74P04233 296 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 SERPIND1P05546 499 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 S100A9P06702 114 aaKnown RBP2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 ANXA4P09525 319 aaPredicted RBP2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 CISD3P0C7P0 127 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 LINC00614P0C842 121 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 UBBP0CG47 229 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 UBCP0CG48 685 aaKnown RBP2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 C1GALT1C1LP0DN25 315 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 SLC25A4P12235 298 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 HLA-GP17693 338 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 PSMB1P20618 241 aaKnown RBP2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 NFYBP25208 207 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 CRABP1P29762 137 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 CHI3L1P36222 383 aaPredicted RBP2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 MDH2P40926 338 aaKnown RBP2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 OR1D4P47884 311 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 IDH2P48735 452 aaKnown RBP2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 PRLHRP49683 370 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 HCCSP53701 268 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 WNT4P56705 351 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 SMIM11AP58511 58 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 SLC26A5P58743 744 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 KRTAP10-1P60331 282 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 CDC42P60953 191 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 RAB5BP61020 215 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 PKIAP61925 76 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 UBA52P62987 128 aaKnown RBP2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 IGLV3-21P80748 117 aaPredicted RBP2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 CDK5Q00535 292 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 DEFA5Q01523 94 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 BDH1Q02338 343 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 IRF8Q02556 426 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 SRYQ05066 204 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 MXD1Q05195 221 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 TNFRSF9Q07011 255 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 FABP9Q0Z7S8 132 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 PDZK1IP1Q13113 114 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 DOC2AQ14183 400 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 ARHGAP19Q14CB8 494 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 PEA15Q15121 130 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 RAB35Q15286 201 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 SSX2Q16385 188 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 SAPCD1Q5SSQ6 148 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 HENMT1Q5T8I9 393 aaKnown RBP2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 FBXW9Q5XUX1 488 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 AGTRAPQ6RW13 159 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 DRAM2Q6UX65 266 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 ANGPTL8Q6UXH0 198 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 WDR88Q6ZMY6 472 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 ZNF621Q6ZSS3 439 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 P4HA3Q7Z4N8 544 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 NAA40Q86UY6 237 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 THOC6Q86W42 341 aaKnown RBP2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 TGIF2LXQ8IUE1 241 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 ZFP82Q8N141 532 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 KDM8Q8N371 416 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 LRRC18Q8N456 261 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 LINC00471Q8N535 108 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms