RNA–Protein interactions for RNA: ENST00000519309.5

CTNNA1-215, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-215ENST00000519309 PRODHO43272 600 aa6.61□□□□□ -1.35
CTNNA1-215ENST00000519309 PRKYO43930 277 aa6.61□□□□□ -1.35
CTNNA1-215ENST00000519309 MRPL3P09001 348 aaKnown RBP6.61□□□□□ -1.35
CTNNA1-215ENST00000519309 ALOX5APP20292 161 aa6.61□□□□□ -1.35
CTNNA1-215ENST00000519309 MPZP25189 248 aa6.61□□□□□ -1.35
CTNNA1-215ENST00000519309 BLVRAP53004 296 aa6.61□□□□□ -1.35
CTNNA1-215ENST00000519309 BDH1Q02338 343 aa6.61□□□□□ -1.35
CTNNA1-215ENST00000519309 APOFQ13790 326 aa6.61□□□□□ -1.35
CTNNA1-215ENST00000519309 SNAPC1Q16533 368 aa6.61□□□□□ -1.35
CTNNA1-215ENST00000519309 LCN1P1Q5VSP4 162 aa6.61□□□□□ -1.35
CTNNA1-215ENST00000519309 OR8H2Q8N162 312 aa6.61□□□□□ -1.35
CTNNA1-215ENST00000519309 OR8B12Q8NGG6 310 aa6.61□□□□□ -1.35
CTNNA1-215ENST00000519309 OR5A2Q8NGI9 324 aa6.61□□□□□ -1.35
CTNNA1-215ENST00000519309 THEM6Q8WUY1 208 aa6.61□□□□□ -1.35
CTNNA1-215ENST00000519309 ISOC1Q96CN7 298 aa6.61□□□□□ -1.35
CTNNA1-215ENST00000519309 ZNF488Q96MN9 340 aa6.61□□□□□ -1.35
CTNNA1-215ENST00000519309 HIST1H2AAQ96QV6 131 aa6.61□□□□□ -1.35
CTNNA1-215ENST00000519309 PAPOLBQ9NRJ5 636 aaKnown RBP6.61□□□□□ -1.35
CTNNA1-215ENST00000519309 POLDIP2Q9Y2S7 368 aa6.61□□□□□ -1.35
CTNNA1-215ENST00000519309 HERC2O95714 4834 aa6.6□□□□□ -1.35
CTNNA1-215ENST00000519309 A0A0U1RQV5 110 aa6.6□□□□□ -1.35
CTNNA1-215ENST00000519309 SEC14L6B5MCN3 397 aa6.6□□□□□ -1.35
CTNNA1-215ENST00000519309 MAGEB4O15481 346 aaPredicted RBP6.6□□□□□ -1.35
CTNNA1-215ENST00000519309 FGF16O43320 207 aa6.6□□□□□ -1.35
CTNNA1-215ENST00000519309 JTBO76095 146 aa6.6□□□□□ -1.35
CTNNA1-215ENST00000519309 NXPH2O95156 264 aa6.6□□□□□ -1.35
CTNNA1-215ENST00000519309 IGLV1-47P01700 117 aa6.6□□□□□ -1.35
CTNNA1-215ENST00000519309 LYNP07948 512 aa6.6□□□□□ -1.35
CTNNA1-215ENST00000519309 H2BFMP0C1H6 154 aa6.6□□□□□ -1.35
CTNNA1-215ENST00000519309 ANXA8P13928 327 aa6.6□□□□□ -1.35
CTNNA1-215ENST00000519309 ATP6V1B1P15313 513 aa6.6□□□□□ -1.35
CTNNA1-215ENST00000519309 CD24P25063 80 aa6.6□□□□□ -1.35
CTNNA1-215ENST00000519309 CD34P28906 385 aa6.6□□□□□ -1.35
CTNNA1-215ENST00000519309 POLR2IP36954 125 aaKnown RBP6.6□□□□□ -1.35
CTNNA1-215ENST00000519309 VEGFCP49767 419 aa6.6□□□□□ -1.35
CTNNA1-215ENST00000519309 INSL3P51460 131 aa6.6□□□□□ -1.35
CTNNA1-215ENST00000519309 CRISP1P54107 249 aa6.6□□□□□ -1.35
CTNNA1-215ENST00000519309 ERVK11-1P61568 191 aa6.6□□□□□ -1.35
CTNNA1-215ENST00000519309 EFNB1P98172 346 aa6.6□□□□□ -1.35
CTNNA1-215ENST00000519309 MFGE8Q08431 387 aaPredicted RBP6.6□□□□□ -1.35
CTNNA1-215ENST00000519309 PTGES3Q15185 160 aaKnown RBP6.6□□□□□ -1.35
CTNNA1-215ENST00000519309 ATP6AP1Q15904 470 aa6.6□□□□□ -1.35
CTNNA1-215ENST00000519309 CEP78Q5JTW2 689 aa6.6□□□□□ -1.35
CTNNA1-215ENST00000519309 SHFQ7M4L6 423 aa6.6□□□□□ -1.35
CTNNA1-215ENST00000519309 AMIGO2Q86SJ2 522 aa6.6□□□□□ -1.35
CTNNA1-215ENST00000519309 ZNF676Q8N7Q3 588 aa6.6□□□□□ -1.35
CTNNA1-215ENST00000519309 RNF152Q8N8N0 203 aa6.6□□□□□ -1.35
CTNNA1-215ENST00000519309 DUX3Q96PT4 197 aa6.6□□□□□ -1.35
CTNNA1-215ENST00000519309 TM2D3Q9BRN9 247 aa6.6□□□□□ -1.35
CTNNA1-215ENST00000519309 ZMAT4Q9H898 229 aa6.6□□□□□ -1.35
CTNNA1-215ENST00000519309 ZNF556Q9HAH1 456 aa6.6□□□□□ -1.35
CTNNA1-215ENST00000519309 TVP23BQ9NYZ1 205 aa6.6□□□□□ -1.35
CTNNA1-215ENST00000519309 DPM3Q9P2X0 92 aa6.6□□□□□ -1.35
CTNNA1-215ENST00000519309 ALMS1Q8TCU4 4167 aa6.59□□□□□ -1.35
CTNNA1-215ENST00000519309 hADV38S2A0JD32 116 aa6.59□□□□□ -1.35
CTNNA1-215ENST00000519309 ZAR1LA6NP61 321 aa6.59□□□□□ -1.35
CTNNA1-215ENST00000519309 OOSP1A8MZH6 123 aa6.59□□□□□ -1.35
CTNNA1-215ENST00000519309 SRSF10O75494 262 aaKnown RBP6.59□□□□□ -1.35
CTNNA1-215ENST00000519309 IGLV3-1P01715 115 aa6.59□□□□□ -1.35
CTNNA1-215ENST00000519309 IGHG2P01859 326 aa6.59□□□□□ -1.35
CTNNA1-215ENST00000519309 HMGN1P05114 100 aa6.59□□□□□ -1.35
CTNNA1-215ENST00000519309 SNRNP70P08621 437 aaKnown RBP6.59□□□□□ -1.35
CTNNA1-215ENST00000519309 FRMD6-AS1P0C7T7 363 aa6.59□□□□□ -1.35
CTNNA1-215ENST00000519309 MAP2K3P46734 347 aa6.59□□□□□ -1.35
CTNNA1-215ENST00000519309 HAAOP46952 286 aa6.59□□□□□ -1.35
CTNNA1-215ENST00000519309 EDDM3BP56851 147 aa6.59□□□□□ -1.35
CTNNA1-215ENST00000519309 RAB25P57735 213 aa6.59□□□□□ -1.35
CTNNA1-215ENST00000519309 RPS7P62081 194 aaKnown RBP6.59□□□□□ -1.35
CTNNA1-215ENST00000519309 SLC35B1P78383 322 aa6.59□□□□□ -1.35
CTNNA1-215ENST00000519309 DEFB136Q30KP8 78 aa6.59□□□□□ -1.35
CTNNA1-215ENST00000519309 C9orf152Q5JTZ5 239 aa6.59□□□□□ -1.35
CTNNA1-215ENST00000519309 SLC35D3Q5M8T2 416 aa6.59□□□□□ -1.35
CTNNA1-215ENST00000519309 AADACL4Q5VUY2 407 aa6.59□□□□□ -1.35
CTNNA1-215ENST00000519309 PLCXD3Q63HM9 321 aa6.59□□□□□ -1.35
CTNNA1-215ENST00000519309 C12orf73Q69YU5 71 aa6.59□□□□□ -1.35
CTNNA1-215ENST00000519309 KDM4DQ6B0I6 523 aa6.59□□□□□ -1.35
CTNNA1-215ENST00000519309 PLEKHG7Q6ZR37 379 aa6.59□□□□□ -1.35
CTNNA1-215ENST00000519309 GDPD3Q7L5L3 318 aa6.59□□□□□ -1.35
CTNNA1-215ENST00000519309 SSX6Q7RTT6 188 aa6.59□□□□□ -1.35
CTNNA1-215ENST00000519309 RTN4RL2Q86UN3 420 aa6.59□□□□□ -1.35
CTNNA1-215ENST00000519309 ZNF573Q86YE8 665 aa6.59□□□□□ -1.35
CTNNA1-215ENST00000519309 C5orf56Q8N8D9 126 aa6.59□□□□□ -1.35
CTNNA1-215ENST00000519309 ASCC1Q8N9N2 400 aaKnown RBP6.59□□□□□ -1.35
CTNNA1-215ENST00000519309 FAM81AQ8TBF8 368 aa6.59□□□□□ -1.35
CTNNA1-215ENST00000519309 ZNF596Q8TC21 504 aa6.59□□□□□ -1.35
CTNNA1-215ENST00000519309 NRBF2Q96F24 287 aa6.59□□□□□ -1.35
CTNNA1-215ENST00000519309 NOL4LQ96MY1 436 aaPredicted RBP6.59□□□□□ -1.35
CTNNA1-215ENST00000519309 TEAD3Q99594 435 aa6.59□□□□□ -1.35
CTNNA1-215ENST00000519309 CIB1Q99828 191 aa6.59□□□□□ -1.35
CTNNA1-215ENST00000519309 NIPAL2Q9H841 368 aa6.59□□□□□ -1.35
CTNNA1-215ENST00000519309 FAM206AQ9NX38 181 aa6.59□□□□□ -1.35
CTNNA1-215ENST00000519309 OR14J1Q9UGF5 321 aa6.59□□□□□ -1.35
CTNNA1-215ENST00000519309 SLC22A13Q9Y226 551 aa6.59□□□□□ -1.35
CTNNA1-215ENST00000519309 SIRT4Q9Y6E7 314 aaPredicted RBP6.59□□□□□ -1.35
CTNNA1-215ENST00000519309 FRAS1Q86XX4 4008 aa6.59□□□□□ -1.35
CTNNA1-215ENST00000519309 KIAA2026Q5HYC2 2103 aa6.59□□□□□ -1.35
CTNNA1-215ENST00000519309 PQLC2LA1A4F0 135 aa6.58□□□□□ -1.36
CTNNA1-215ENST00000519309 MEX3AA1L020 520 aaKnown RBP6.58□□□□□ -1.36
CTNNA1-215ENST00000519309 FAM90A18PA6NE21 464 aa6.58□□□□□ -1.36
CTNNA1-215ENST00000519309 FAM90A16PA6NEW6 464 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms