RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 ALKBH6Q3KRA9 238 aa12.33□□□□□ -0.44
CLN8-204ENST00000519254 SCGB2B2Q4G0G5 96 aa12.33□□□□□ -0.44
CLN8-204ENST00000519254 NKAPLQ5M9Q1 402 aa12.33□□□□□ -0.44
CLN8-204ENST00000519254 ELP2Q6IA86 826 aa12.33□□□□□ -0.44
CLN8-204ENST00000519254 ADAM5Q6NVV9 412 aa12.33□□□□□ -0.44
CLN8-204ENST00000519254 TMEM200AQ86VY9 491 aa12.33□□□□□ -0.44
CLN8-204ENST00000519254 KLF14Q8TD94 323 aaPredicted RBP12.33□□□□□ -0.44
CLN8-204ENST00000519254 EMG1Q92979 244 aaKnown RBP12.33□□□□□ -0.44
CLN8-204ENST00000519254 SLAMF9Q96A28 289 aa12.33□□□□□ -0.44
CLN8-204ENST00000519254 MARS2Q96GW9 593 aaKnown RBP12.33□□□□□ -0.44
CLN8-204ENST00000519254 PRRT1Q99946 306 aa12.33□□□□□ -0.44
CLN8-204ENST00000519254 FAAP24Q9BTP7 215 aa12.33□□□□□ -0.44
CLN8-204ENST00000519254 MTCH1Q9NZJ7 389 aa12.33□□□□□ -0.44
CLN8-204ENST00000519254 ZNF230Q9UIE0 474 aaPredicted RBP12.33□□□□□ -0.44
CLN8-204ENST00000519254 SNRPGP15A8MWD9 76 aa12.33□□□□□ -0.44
CLN8-204ENST00000519254 F8VVB4 439 aa12.33□□□□□ -0.44
CLN8-204ENST00000519254 F8VWA3 439 aa12.33□□□□□ -0.44
CLN8-204ENST00000519254 SSNA1O43805 119 aa12.33□□□□□ -0.44
CLN8-204ENST00000519254 PSG7Q13046 419 aa12.33□□□□□ -0.44
CLN8-204ENST00000519254 ZNF626Q68DY1 528 aa12.33□□□□□ -0.44
CLN8-204ENST00000519254 RGS7BPQ6MZT1 257 aaPredicted RBP12.33□□□□□ -0.44
CLN8-204ENST00000519254 NOXA1Q86UR1 476 aa12.33□□□□□ -0.44
CLN8-204ENST00000519254 BATF2Q8N1L9 274 aa12.33□□□□□ -0.44
CLN8-204ENST00000519254 OR10AD1Q8NGE0 317 aa12.33□□□□□ -0.44
CLN8-204ENST00000519254 OR52B4Q8NGK2 314 aa12.33□□□□□ -0.44
CLN8-204ENST00000519254 PLPPR2Q96GM1 343 aa12.33□□□□□ -0.44
CLN8-204ENST00000519254 HS3ST6Q96QI5 342 aa12.33□□□□□ -0.44
CLN8-204ENST00000519254 SULT4A1Q9BR01 284 aa12.33□□□□□ -0.44
CLN8-204ENST00000519254 ST6GALNAC5Q9BVH7 336 aa12.33□□□□□ -0.44
CLN8-204ENST00000519254 ALX4Q9H161 411 aaPredicted RBP12.33□□□□□ -0.44
CLN8-204ENST00000519254 ESRP2Q9H6T0 727 aaKnown RBP12.33□□□□□ -0.44
CLN8-204ENST00000519254 HCFC1P51610 2035 aa12.32□□□□□ -0.44
CLN8-204ENST00000519254 TMEM82A0PJX8 343 aa12.32□□□□□ -0.44
CLN8-204ENST00000519254 OR5B21A6NL26 309 aa12.32□□□□□ -0.44
CLN8-204ENST00000519254 SYNGR1O43759 233 aa12.32□□□□□ -0.44
CLN8-204ENST00000519254 GCH1P30793 250 aa12.32□□□□□ -0.44
CLN8-204ENST00000519254 GNG3P63215 75 aa12.32□□□□□ -0.44
CLN8-204ENST00000519254 ZMYND11Q15326 602 aa12.32□□□□□ -0.44
CLN8-204ENST00000519254 ZNF718Q3SXZ3 478 aa12.32□□□□□ -0.44
CLN8-204ENST00000519254 ATPAF1Q5TC12 328 aaPredicted RBP12.32□□□□□ -0.44
CLN8-204ENST00000519254 MKXQ8IYA7 352 aa12.32□□□□□ -0.44
CLN8-204ENST00000519254 CAPSLQ8WWF8 208 aa12.32□□□□□ -0.44
CLN8-204ENST00000519254 MAFIPQ8WZ33 124 aa12.32□□□□□ -0.44
CLN8-204ENST00000519254 POM121Q96HA1 1249 aa12.32□□□□□ -0.44
CLN8-204ENST00000519254 HDHD3Q9BSH5 251 aaPredicted RBP12.32□□□□□ -0.44
CLN8-204ENST00000519254 GPN1Q9HCN4 374 aaPredicted RBP12.32□□□□□ -0.44
CLN8-204ENST00000519254 AK3Q9UIJ7 227 aa12.32□□□□□ -0.44
CLN8-204ENST00000519254 ZNF222Q9UK12 451 aa12.32□□□□□ -0.44
CLN8-204ENST00000519254 VSIG4Q9Y279 399 aa12.32□□□□□ -0.44
CLN8-204ENST00000519254 CADP27708 2225 aa12.32□□□□□ -0.44
CLN8-204ENST00000519254 ZNF462Q96JM2 2506 aa12.31□□□□□ -0.44
CLN8-204ENST00000519254 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.31□□□□□ -0.44
CLN8-204ENST00000519254 OR2AT4A6NND4 320 aa12.31□□□□□ -0.44
CLN8-204ENST00000519254 IQCF6A8MYZ5 107 aa12.31□□□□□ -0.44
CLN8-204ENST00000519254 SMLR1H3BR10 107 aa12.31□□□□□ -0.44
CLN8-204ENST00000519254 CREBL2O60519 120 aaPredicted RBP12.31□□□□□ -0.44
CLN8-204ENST00000519254 C1QBP02746 253 aa12.31□□□□□ -0.44
CLN8-204ENST00000519254 RNF224P0DH78 156 aa12.31□□□□□ -0.44
CLN8-204ENST00000519254 AMY2BP19961 511 aa12.31□□□□□ -0.44
CLN8-204ENST00000519254 SNU13P55769 128 aaKnown RBP12.31□□□□□ -0.44
CLN8-204ENST00000519254 NKX6-1P78426 367 aaPredicted RBP12.31□□□□□ -0.44
CLN8-204ENST00000519254 PDCD1Q15116 288 aa12.31□□□□□ -0.44
CLN8-204ENST00000519254 ACTBL2Q562R1 376 aa12.31□□□□□ -0.44
CLN8-204ENST00000519254 VAX1Q5SQQ9 334 aa12.31□□□□□ -0.44
CLN8-204ENST00000519254 BRICD5Q6PL45 260 aa12.31□□□□□ -0.44
CLN8-204ENST00000519254 ZNF486Q96H40 463 aaPredicted RBP12.31□□□□□ -0.44
CLN8-204ENST00000519254 OR51I2Q9H344 312 aa12.31□□□□□ -0.44
CLN8-204ENST00000519254 ZNF69Q9UC07 566 aa12.31□□□□□ -0.44
CLN8-204ENST00000519254 DUSP13Q9UII6 198 aa12.31□□□□□ -0.44
CLN8-204ENST00000519254 ATP23Q9Y6H3 246 aa12.31□□□□□ -0.44
CLN8-204ENST00000519254 IGKV1D-8A0A087WSZ0 117 aa12.3□□□□□ -0.44
CLN8-204ENST00000519254 MEIKINA0A087WXM9 373 aa12.3□□□□□ -0.44
CLN8-204ENST00000519254 C19orf84I3L1E1 186 aa12.3□□□□□ -0.44
CLN8-204ENST00000519254 TIMM8AO60220 97 aaPredicted RBP12.3□□□□□ -0.44
CLN8-204ENST00000519254 PDCD6O75340 191 aa12.3□□□□□ -0.44
CLN8-204ENST00000519254 IFNA6P05013 189 aa12.3□□□□□ -0.44
CLN8-204ENST00000519254 FGF12P61328 243 aa12.3□□□□□ -0.44
CLN8-204ENST00000519254 NCMAPQ5T1S8 102 aa12.3□□□□□ -0.44
CLN8-204ENST00000519254 HAGHLQ6PII5 290 aaPredicted RBP12.3□□□□□ -0.44
CLN8-204ENST00000519254 ZNF573Q86YE8 665 aa12.3□□□□□ -0.44
CLN8-204ENST00000519254 SYT3Q9BQG1 590 aa12.3□□□□□ -0.44
CLN8-204ENST00000519254 MYOZ1Q9NP98 299 aaPredicted RBP12.3□□□□□ -0.44
CLN8-204ENST00000519254 FAM90A10PA6NDY2 464 aa12.3□□□□□ -0.44
CLN8-204ENST00000519254 FAM90A18PA6NE21 464 aa12.3□□□□□ -0.44
CLN8-204ENST00000519254 FAM90A16PA6NEW6 464 aa12.3□□□□□ -0.44
CLN8-204ENST00000519254 FAM90A20PA6NIJ5 464 aa12.3□□□□□ -0.44
CLN8-204ENST00000519254 FAM90A8PA6NJQ4 464 aa12.3□□□□□ -0.44
CLN8-204ENST00000519254 FAM90A7PA6NKC0 464 aa12.3□□□□□ -0.44
CLN8-204ENST00000519254 FAM90A22PA8MWA6 464 aa12.3□□□□□ -0.44
CLN8-204ENST00000519254 FAM90A12PA8MX19 464 aa12.3□□□□□ -0.44
CLN8-204ENST00000519254 FAM90A5PA8MXJ8 464 aa12.3□□□□□ -0.44
CLN8-204ENST00000519254 FAM90A23PA8MXZ1 464 aa12.3□□□□□ -0.44
CLN8-204ENST00000519254 TRAPPC2LH3BP13 241 aa12.3□□□□□ -0.44
CLN8-204ENST00000519254 FABP7O15540 132 aa12.3□□□□□ -0.44
CLN8-204ENST00000519254 CD3EP07766 207 aa12.3□□□□□ -0.44
CLN8-204ENST00000519254 FAM90A15PP0C7V4 464 aa12.3□□□□□ -0.44
CLN8-204ENST00000519254 FAM90A13PP0C7W8 464 aa12.3□□□□□ -0.44
CLN8-204ENST00000519254 FAM90A14PP0C7W9 464 aa12.3□□□□□ -0.44
CLN8-204ENST00000519254 FAM90A24PP0C7X0 464 aa12.3□□□□□ -0.44
CLN8-204ENST00000519254 ANXA3P12429 323 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms