RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 TMED9Q9BVK6 235 aa18.16■□□□□ 0.5
VEGFA-217ENST00000518538 FAM234AQ9H0X4 552 aa18.16■□□□□ 0.5
VEGFA-217ENST00000518538 ELL3Q9HB65 397 aaPredicted RBP18.16■□□□□ 0.5
VEGFA-217ENST00000518538 IL36RNQ9UBH0 155 aa18.16■□□□□ 0.5
VEGFA-217ENST00000518538 A0A1W2PPK0 400 aa18.15■□□□□ 0.5
VEGFA-217ENST00000518538 PIN1P1O15428 100 aa18.15■□□□□ 0.5
VEGFA-217ENST00000518538 HAND1O96004 215 aa18.15■□□□□ 0.5
VEGFA-217ENST00000518538 SFTPBP07988 381 aa18.15■□□□□ 0.5
VEGFA-217ENST00000518538 MMP9P14780 707 aa18.15■□□□□ 0.5
VEGFA-217ENST00000518538 ZNF93P35789 620 aaPredicted RBP18.15■□□□□ 0.5
VEGFA-217ENST00000518538 TPBGQ13641 420 aa18.15■□□□□ 0.5
VEGFA-217ENST00000518538 KLF17Q5JT82 389 aaPredicted RBP18.15■□□□□ 0.5
VEGFA-217ENST00000518538 METTL11BQ5VVY1 283 aa18.15■□□□□ 0.5
VEGFA-217ENST00000518538 LIPKQ5VXJ0 399 aa18.15■□□□□ 0.5
VEGFA-217ENST00000518538 TNFAIP8L1Q8WVP5 186 aa18.15■□□□□ 0.5
VEGFA-217ENST00000518538 WDFY2Q96P53 400 aa18.15■□□□□ 0.5
VEGFA-217ENST00000518538 MGLLQ99685 303 aa18.15■□□□□ 0.5
VEGFA-217ENST00000518538 SIRPDQ9H106 197 aa18.15■□□□□ 0.5
VEGFA-217ENST00000518538 NOX4Q9NPH5 578 aa18.15■□□□□ 0.5
VEGFA-217ENST00000518538 GLS2Q9UI32 602 aa18.15■□□□□ 0.5
VEGFA-217ENST00000518538 NUP50Q9UKX7 468 aa18.15■□□□□ 0.5
VEGFA-217ENST00000518538 KPTNQ9Y664 436 aa18.15■□□□□ 0.5
VEGFA-217ENST00000518538 SVEP1Q4LDE5 3571 aa18.15■□□□□ 0.5
VEGFA-217ENST00000518538 TRBV23-1A0A0A0MS06 115 aa18.14■□□□□ 0.49
VEGFA-217ENST00000518538 K7N7A8 449 aa18.14■□□□□ 0.49
VEGFA-217ENST00000518538 ZNF737O75373 536 aa18.14■□□□□ 0.49
VEGFA-217ENST00000518538 TOX4O94842 621 aa18.14■□□□□ 0.49
VEGFA-217ENST00000518538 TK1P04183 234 aa18.14■□□□□ 0.49
VEGFA-217ENST00000518538 CALCBP10092 127 aa18.14■□□□□ 0.49
VEGFA-217ENST00000518538 CPEP16870 476 aa18.14■□□□□ 0.49
VEGFA-217ENST00000518538 BMXP51813 675 aa18.14■□□□□ 0.49
VEGFA-217ENST00000518538 ACSM3Q53FZ2 586 aa18.14■□□□□ 0.49
VEGFA-217ENST00000518538 UNQ9370/PRO34162Q6UXP9 181 aa18.14■□□□□ 0.49
VEGFA-217ENST00000518538 ZNF367Q7RTV3 350 aa18.14■□□□□ 0.49
VEGFA-217ENST00000518538 KIR3DL3Q8N743 410 aa18.14■□□□□ 0.49
VEGFA-217ENST00000518538 ASCC1Q8N9N2 400 aaKnown RBP18.14■□□□□ 0.49
VEGFA-217ENST00000518538 FAM192AQ9GZU8 254 aa18.14■□□□□ 0.49
VEGFA-217ENST00000518538 ACOT13Q9NPJ3 140 aa18.14■□□□□ 0.49
VEGFA-217ENST00000518538 TRAV40A0A0B4J280 105 aa18.13■□□□□ 0.49
VEGFA-217ENST00000518538 MAGEA13PA6NCF6 341 aa18.13■□□□□ 0.49
VEGFA-217ENST00000518538 SC5DO75845 299 aa18.13■□□□□ 0.49
VEGFA-217ENST00000518538 PTGFRP43088 359 aa18.13■□□□□ 0.49
VEGFA-217ENST00000518538 OR3A4PP47883 348 aa18.13■□□□□ 0.49
VEGFA-217ENST00000518538 MTNR1BP49286 362 aa18.13■□□□□ 0.49
VEGFA-217ENST00000518538 SNU13P55769 128 aaKnown RBP18.13■□□□□ 0.49
VEGFA-217ENST00000518538 ARF6P62330 175 aa18.13■□□□□ 0.49
VEGFA-217ENST00000518538 INSL4Q14641 139 aa18.13■□□□□ 0.49
VEGFA-217ENST00000518538 ELP2Q6IA86 826 aa18.13■□□□□ 0.49
VEGFA-217ENST00000518538 ASCL4Q6XD76 172 aa18.13■□□□□ 0.49
VEGFA-217ENST00000518538 SVOPQ8N4V2 548 aa18.13■□□□□ 0.49
VEGFA-217ENST00000518538 NKX3-1Q99801 234 aaPredicted RBP18.13■□□□□ 0.49
VEGFA-217ENST00000518538 PCGF1Q9BSM1 259 aa18.13■□□□□ 0.49
VEGFA-217ENST00000518538 ONECUT1Q9UBC0 465 aa18.13■□□□□ 0.49
VEGFA-217ENST00000518538 GSTK1Q9Y2Q3 226 aa18.13■□□□□ 0.49
VEGFA-217ENST00000518538 A0A1W2PQ09 198 aa18.12■□□□□ 0.49
VEGFA-217ENST00000518538 DUSP1P28562 367 aa18.12■□□□□ 0.49
VEGFA-217ENST00000518538 EMX1Q04741 257 aaPredicted RBP18.12■□□□□ 0.49
VEGFA-217ENST00000518538 CDH26Q8IXH8 852 aa18.12■□□□□ 0.49
VEGFA-217ENST00000518538 PHC2Q8IXK0 858 aa18.12■□□□□ 0.49
VEGFA-217ENST00000518538 CMTM4Q8IZR5 234 aa18.12■□□□□ 0.49
VEGFA-217ENST00000518538 SNX22Q96L94 193 aa18.12■□□□□ 0.49
VEGFA-217ENST00000518538 TBX15Q96SF7 602 aa18.12■□□□□ 0.49
VEGFA-217ENST00000518538 EXOSC4Q9NPD3 245 aaKnown RBP18.12■□□□□ 0.49
VEGFA-217ENST00000518538 SH2D1BO14796 132 aa18.11■□□□□ 0.49
VEGFA-217ENST00000518538 MAS1P04201 325 aa18.11■□□□□ 0.49
VEGFA-217ENST00000518538 IGHV4-38-2P0DP08 117 aa18.11■□□□□ 0.49
VEGFA-217ENST00000518538 PSMA1P25786 263 aaKnown RBP18.11■□□□□ 0.49
VEGFA-217ENST00000518538 RSU1Q15404 277 aa18.11■□□□□ 0.49
VEGFA-217ENST00000518538 TRAM1Q15629 374 aa18.11■□□□□ 0.49
VEGFA-217ENST00000518538 OR8H2Q8N162 312 aa18.11■□□□□ 0.49
VEGFA-217ENST00000518538 NKAIN3Q8N8D7 197 aa18.11■□□□□ 0.49
VEGFA-217ENST00000518538 OR5D13Q8NGL4 314 aa18.11■□□□□ 0.49
VEGFA-217ENST00000518538 TMEM203Q969S6 136 aa18.11■□□□□ 0.49
VEGFA-217ENST00000518538 OCEL1Q9H607 264 aa18.11■□□□□ 0.49
VEGFA-217ENST00000518538 C19orf12Q9NSK7 152 aa18.11■□□□□ 0.49
VEGFA-217ENST00000518538 IL36GQ9NZH8 169 aa18.11■□□□□ 0.49
VEGFA-217ENST00000518538 LRRC42Q9Y546 428 aa18.11■□□□□ 0.49
VEGFA-217ENST00000518538 JMJD1CQ15652 2540 aa18.1■□□□□ 0.49
VEGFA-217ENST00000518538 TMEM82A0PJX8 343 aa18.1■□□□□ 0.49
VEGFA-217ENST00000518538 OR2H2O95918 312 aa18.1■□□□□ 0.49
VEGFA-217ENST00000518538 FPR2P25090 351 aa18.1■□□□□ 0.49
VEGFA-217ENST00000518538 RPS25P62851 125 aaKnown RBP18.1■□□□□ 0.49
VEGFA-217ENST00000518538 RPL31P62899 125 aaKnown RBP18.1■□□□□ 0.49
VEGFA-217ENST00000518538 PDCD1Q15116 288 aa18.1■□□□□ 0.49
VEGFA-217ENST00000518538 FAM27D1Q5T7N8 215 aa18.1■□□□□ 0.49
VEGFA-217ENST00000518538 C17orf107Q6ZR85 190 aa18.1■□□□□ 0.49
VEGFA-217ENST00000518538 CEACAM19Q7Z692 300 aa18.1■□□□□ 0.49
VEGFA-217ENST00000518538 FAM185AQ8N0U4 392 aa18.1■□□□□ 0.49
VEGFA-217ENST00000518538 SPARTQ8N0X7 666 aa18.1■□□□□ 0.49
VEGFA-217ENST00000518538 Q8NFD4 153 aa18.1■□□□□ 0.49
VEGFA-217ENST00000518538 TBC1D15Q8TC07 691 aa18.1■□□□□ 0.49
VEGFA-217ENST00000518538 METTL9Q9H1A3 318 aa18.1■□□□□ 0.49
VEGFA-217ENST00000518538 TCF7L1Q9HCS4 588 aa18.1■□□□□ 0.49
VEGFA-217ENST00000518538 ZNF69Q9UC07 566 aa18.1■□□□□ 0.49
VEGFA-217ENST00000518538 SF3B6Q9Y3B4 125 aaKnown RBP18.1■□□□□ 0.49
VEGFA-217ENST00000518538 IGHV3OR16-10A0A075B7F0 116 aa18.09■□□□□ 0.49
VEGFA-217ENST00000518538 MEGF11A6BM72 1044 aa18.09■□□□□ 0.49
VEGFA-217ENST00000518538 M0R1W7 72 aa18.09■□□□□ 0.49
VEGFA-217ENST00000518538 CDRT1O95170 752 aa18.09■□□□□ 0.49
VEGFA-217ENST00000518538 UCHL1P09936 223 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms