RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 BSGP35613 385 aa4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 P2RY1P47900 373 aa4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 RPL34P49207 117 aaKnown RBP4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 STC1P52823 247 aa4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 CLDN15P56746 228 aa4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 RIPPLY3P57055 190 aa4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 TAS2R30P59541 319 aa4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 TAS2R50P59544 299 aa4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 KRTAP1-1Q07627 177 aa4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 HSD52Q0P140 79 aa4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 ZNF266Q14584 549 aa4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 CSRP2Q16527 193 aa4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 CEACAM21Q3KPI0 293 aa4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 SPATA45Q537H7 98 aa4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 ACTL10Q5JWF8 245 aa4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 TMEM240Q5SV17 173 aa4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 C1QL3Q5VWW1 255 aa4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 RAET1LQ5VY80 246 aa4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 NOXRED1Q6NXP6 359 aa4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 WDR82Q6UXN9 313 aa4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 SLC16A9Q7RTY1 509 aa4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 TSEN54Q7Z6J9 526 aaKnown RBP4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 CENPVQ7Z7K6 275 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 TMEM150AQ86TG1 271 aa4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 SGPP2Q8IWX5 399 aa4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 KLHDC8AQ8IYD2 350 aa4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 BCL6BQ8N143 479 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 TMEM217Q8N7C4 229 aa4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 SIGLECL1Q8N7X8 197 aa4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 ZNF709Q8N972 641 aa4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 CYB561A3Q8NBI2 242 aa4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 POC1AQ8NBT0 407 aa4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 CLEC1AQ8NC01 280 aa4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 OR10G3Q8NGC4 313 aa4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 OR2T10Q8NGZ9 312 aa4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 OR52E5Q8NH55 327 aa4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 CMTM2Q8TAZ6 248 aa4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 DOK4Q8TEW6 326 aa4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 GLMPQ8WWB7 406 aa4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 CACNG8Q8WXS5 425 aa4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 RAB8BQ92930 207 aa4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 EID2BQ96D98 161 aa4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 STARD4Q96DR4 205 aa4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 SMIM19Q96E16 107 aa4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 GNPNAT1Q96EK6 184 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 SDSLQ96GA7 329 aa4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 SEMA3CQ99985 751 aa4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 PMCHL2Q9BQD1 86 aa4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 LINC00470Q9BZP3 86 aa4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 NMNAT2Q9BZQ4 307 aa4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 DEFB129Q9H1M3 183 aa4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 OR51I1Q9H343 314 aa4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 MS4A5Q9H3V2 200 aa4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 ZNF703Q9H7S9 590 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 NGBQ9NPG2 151 aa4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 OSER1Q9NX31 292 aa4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 KCNIP1Q9NZI2 227 aa4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 P2RX2Q9UBL9 471 aa4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 FBXL17Q9UF56 701 aa4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 IL36AQ9UHA7 158 aa4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 JPT1Q9UK76 154 aa4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 SLC7A7Q9UM01 511 aa4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 NSG2Q9Y328 171 aa4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 NINQ8N4C6 2090 aa4.2□□□□□ -1.74
HMGB1P19-201ENST00000517578 BRCA1P38398 1863 aaKnown RBP4.2□□□□□ -1.74
HMGB1P19-201ENST00000517578 TRAV1-1A0A0B4J248 108 aa4.2□□□□□ -1.74
HMGB1P19-201ENST00000517578 TRAV38-1A0A0B4J264 116 aa4.2□□□□□ -1.74
HMGB1P19-201ENST00000517578 PIGBOS1A0A0B4J2F0 54 aa4.2□□□□□ -1.74
HMGB1P19-201ENST00000517578 A0A0G2JMM0 328 aa4.2□□□□□ -1.74
HMGB1P19-201ENST00000517578 TRBV4-1A0A0J9YWV2 114 aa4.2□□□□□ -1.74
HMGB1P19-201ENST00000517578 A0A1W2PPB8 328 aa4.2□□□□□ -1.74
HMGB1P19-201ENST00000517578 IGLC7A0M8Q6 106 aa4.2□□□□□ -1.74
HMGB1P19-201ENST00000517578 C1orf226A1L170 272 aa4.2□□□□□ -1.74
HMGB1P19-201ENST00000517578 TMEM189A5PLL7 270 aa4.2□□□□□ -1.74
HMGB1P19-201ENST00000517578 HELTA6NFD8 242 aa4.2□□□□□ -1.74
HMGB1P19-201ENST00000517578 OR2AG2A6NM03 316 aa4.2□□□□□ -1.74
HMGB1P19-201ENST00000517578 KIR3DP1A8MWS1 328 aa4.2□□□□□ -1.74
HMGB1P19-201ENST00000517578 SMIM22K7EJ46 135 aa4.2□□□□□ -1.74
HMGB1P19-201ENST00000517578 LATO43561 262 aa4.2□□□□□ -1.74
HMGB1P19-201ENST00000517578 RCBTB2O95199 551 aa4.2□□□□□ -1.74
HMGB1P19-201ENST00000517578 SOX14O95416 240 aa4.2□□□□□ -1.74
HMGB1P19-201ENST00000517578 CD160O95971 181 aa4.2□□□□□ -1.74
HMGB1P19-201ENST00000517578 HRASP01112 189 aa4.2□□□□□ -1.74
HMGB1P19-201ENST00000517578 FGF1P05230 155 aa4.2□□□□□ -1.74
HMGB1P19-201ENST00000517578 CTSDP07339 412 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P19-201ENST00000517578 FTH1P19P0C7X4 201 aa4.2□□□□□ -1.74
HMGB1P19-201ENST00000517578 MPC1LP0DKB6 136 aa4.2□□□□□ -1.74
HMGB1P19-201ENST00000517578 PNMTP11086 282 aa4.2□□□□□ -1.74
HMGB1P19-201ENST00000517578 PSG1P11464 419 aa4.2□□□□□ -1.74
HMGB1P19-201ENST00000517578 AMD1P17707 334 aa4.2□□□□□ -1.74
HMGB1P19-201ENST00000517578 LMO1P25800 156 aa4.2□□□□□ -1.74
HMGB1P19-201ENST00000517578 PRDX3P30048 256 aaKnown RBP4.2□□□□□ -1.74
HMGB1P19-201ENST00000517578 TSPOP30536 169 aa4.2□□□□□ -1.74
HMGB1P19-201ENST00000517578 SRD5A2P31213 254 aa4.2□□□□□ -1.74
HMGB1P19-201ENST00000517578 FCGR2CP31995 323 aa4.2□□□□□ -1.74
HMGB1P19-201ENST00000517578 ADCYAP1R1P41586 468 aa4.2□□□□□ -1.74
HMGB1P19-201ENST00000517578 GPR6P46095 362 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P19-201ENST00000517578 OR1E2P47887 323 aa4.2□□□□□ -1.74
HMGB1P19-201ENST00000517578 MLF1P58340 268 aa4.2□□□□□ -1.74
HMGB1P19-201ENST00000517578 HERV-K104P63124 156 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms