RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 LRRIQ3A6PVS8 624 aaPredicted RBP-2.49□□□□□ -2.81
RNU6-542P-201ENST00000516405 RAD1O60671 282 aa-2.49□□□□□ -2.81
RNU6-542P-201ENST00000516405 SOX14O95416 240 aa-2.49□□□□□ -2.81
RNU6-542P-201ENST00000516405 STARD3NLO95772 234 aa-2.49□□□□□ -2.81
RNU6-542P-201ENST00000516405 MT-ND3P03897 115 aa-2.49□□□□□ -2.81
RNU6-542P-201ENST00000516405 CCL4P13236 92 aa-2.49□□□□□ -2.81
RNU6-542P-201ENST00000516405 GNA11P29992 359 aa-2.49□□□□□ -2.81
RNU6-542P-201ENST00000516405 CD200P41217 278 aa-2.49□□□□□ -2.81
RNU6-542P-201ENST00000516405 ETV1P50549 477 aa-2.49□□□□□ -2.81
RNU6-542P-201ENST00000516405 OR4D2P58180 307 aa-2.49□□□□□ -2.81
RNU6-542P-201ENST00000516405 RHBDL3P58872 404 aa-2.49□□□□□ -2.81
RNU6-542P-201ENST00000516405 KLRB1Q12918 225 aa-2.49□□□□□ -2.81
RNU6-542P-201ENST00000516405 SPRNQ5BIV9 151 aa-2.49□□□□□ -2.81
RNU6-542P-201ENST00000516405 ANGPTL8Q6UXH0 198 aa-2.49□□□□□ -2.81
RNU6-542P-201ENST00000516405 C1orf122Q6ZSJ8 110 aa-2.49□□□□□ -2.81
RNU6-542P-201ENST00000516405 KTN1-AS1Q86SY8 53 aa-2.49□□□□□ -2.81
RNU6-542P-201ENST00000516405 HOOK3Q86VS8 718 aa-2.49□□□□□ -2.81
RNU6-542P-201ENST00000516405 UMODL1-AS1Q8N2C9 162 aa-2.49□□□□□ -2.81
RNU6-542P-201ENST00000516405 BBOF1Q8ND07 529 aa-2.49□□□□□ -2.81
RNU6-542P-201ENST00000516405 STXBP6Q8NFX7 210 aa-2.49□□□□□ -2.81
RNU6-542P-201ENST00000516405 OR2A1Q8NGT9 310 aa-2.49□□□□□ -2.81
RNU6-542P-201ENST00000516405 TWIST2Q8WVJ9 160 aa-2.49□□□□□ -2.81
RNU6-542P-201ENST00000516405 SLC13A3Q8WWT9 602 aa-2.49□□□□□ -2.81
RNU6-542P-201ENST00000516405 FAM3CQ92520 227 aa-2.49□□□□□ -2.81
RNU6-542P-201ENST00000516405 FGF13Q92913 245 aa-2.49□□□□□ -2.81
RNU6-542P-201ENST00000516405 CXorf40BQ96DE9 158 aa-2.49□□□□□ -2.81
RNU6-542P-201ENST00000516405 CLCC1Q96S66 551 aa-2.49□□□□□ -2.81
RNU6-542P-201ENST00000516405 SERPINI1Q99574 410 aa-2.49□□□□□ -2.81
RNU6-542P-201ENST00000516405 COPS8Q99627 209 aa-2.49□□□□□ -2.81
RNU6-542P-201ENST00000516405 GABRG3Q99928 467 aa-2.49□□□□□ -2.81
RNU6-542P-201ENST00000516405 ADPGKQ9BRR6 497 aa-2.49□□□□□ -2.81
RNU6-542P-201ENST00000516405 ACAT2Q9BWD1 397 aa-2.49□□□□□ -2.81
RNU6-542P-201ENST00000516405 ING4Q9UNL4 249 aa-2.49□□□□□ -2.81
RNU6-542P-201ENST00000516405 SPG11Q96JI7 2443 aa-2.49□□□□□ -2.81
RNU6-542P-201ENST00000516405 RTL1A6NKG5 1358 aa-2.49□□□□□ -2.81
RNU6-542P-201ENST00000516405 CNTNAP1P78357 1384 aa-2.49□□□□□ -2.81
RNU6-542P-201ENST00000516405 TRIM64A6NGJ6 449 aa-2.5□□□□□ -2.81
RNU6-542P-201ENST00000516405 TRIM64BA6NI03 449 aa-2.5□□□□□ -2.81
RNU6-542P-201ENST00000516405 CCL25O15444 150 aa-2.5□□□□□ -2.81
RNU6-542P-201ENST00000516405 FCMRO60667 390 aa-2.5□□□□□ -2.81
RNU6-542P-201ENST00000516405 SERPINA7P05543 415 aa-2.5□□□□□ -2.81
RNU6-542P-201ENST00000516405 ZNF728P0DKX0 622 aa-2.5□□□□□ -2.81
RNU6-542P-201ENST00000516405 CYP2F1P24903 491 aa-2.5□□□□□ -2.81
RNU6-542P-201ENST00000516405 CHI3L1P36222 383 aaPredicted RBP-2.5□□□□□ -2.81
RNU6-542P-201ENST00000516405 SLC35A2P78381 396 aa-2.5□□□□□ -2.81
RNU6-542P-201ENST00000516405 APOFQ13790 326 aa-2.5□□□□□ -2.81
RNU6-542P-201ENST00000516405 OR8G1Q15617 311 aa-2.5□□□□□ -2.81
RNU6-542P-201ENST00000516405 TMEM241Q24JQ0 296 aa-2.5□□□□□ -2.81
RNU6-542P-201ENST00000516405 ARMC3Q5W041 872 aa-2.5□□□□□ -2.81
RNU6-542P-201ENST00000516405 MBOAT2Q6ZWT7 520 aa-2.5□□□□□ -2.81
RNU6-542P-201ENST00000516405 KCTD9Q7L273 389 aa-2.5□□□□□ -2.81
RNU6-542P-201ENST00000516405 ZNF410Q86VK4 478 aa-2.5□□□□□ -2.81
RNU6-542P-201ENST00000516405 OR52E2Q8NGJ4 325 aa-2.5□□□□□ -2.81
RNU6-542P-201ENST00000516405 OSTF1Q92882 214 aa-2.5□□□□□ -2.81
RNU6-542P-201ENST00000516405 TMEM230Q96A57 120 aa-2.5□□□□□ -2.81
RNU6-542P-201ENST00000516405 SNF8Q96H20 258 aa-2.5□□□□□ -2.81
RNU6-542P-201ENST00000516405 SLF1Q9BQI6 1058 aa-2.5□□□□□ -2.81
RNU6-542P-201ENST00000516405 CCDC68Q9H2F9 335 aa-2.5□□□□□ -2.81
RNU6-542P-201ENST00000516405 CNIH4Q9P003 139 aa-2.5□□□□□ -2.81
RNU6-542P-201ENST00000516405 TAC3Q9UHF0 121 aa-2.5□□□□□ -2.81
RNU6-542P-201ENST00000516405 HHLA3Q9XRX5 114 aa-2.5□□□□□ -2.81
RNU6-542P-201ENST00000516405 A0A087WSZ3 146 aa-2.51□□□□□ -2.81
RNU6-542P-201ENST00000516405 TRAV14DV4A0A0A6YYC5 116 aa-2.51□□□□□ -2.81
RNU6-542P-201ENST00000516405 SMIM30A4D0T7 59 aa-2.51□□□□□ -2.81
RNU6-542P-201ENST00000516405 C2orf70A6NJV1 201 aa-2.51□□□□□ -2.81
RNU6-542P-201ENST00000516405 TMEM212A6NML5 194 aa-2.51□□□□□ -2.81
RNU6-542P-201ENST00000516405 C9JQL5 133 aa-2.51□□□□□ -2.81
RNU6-542P-201ENST00000516405 ITGB1BP1O14713 200 aa-2.51□□□□□ -2.81
RNU6-542P-201ENST00000516405 PSPHP1O15172 72 aa-2.51□□□□□ -2.81
RNU6-542P-201ENST00000516405 CLDN3O15551 220 aa-2.51□□□□□ -2.81
RNU6-542P-201ENST00000516405 RAMP3O60896 148 aa-2.51□□□□□ -2.81
RNU6-542P-201ENST00000516405 KERAO60938 352 aa-2.51□□□□□ -2.81
RNU6-542P-201ENST00000516405 C1orf105O95561 183 aa-2.51□□□□□ -2.81
RNU6-542P-201ENST00000516405 GUSBP08236 651 aa-2.51□□□□□ -2.81
RNU6-542P-201ENST00000516405 HLA-GP17693 338 aa-2.51□□□□□ -2.81
RNU6-542P-201ENST00000516405 IL32P24001 234 aa-2.51□□□□□ -2.81
RNU6-542P-201ENST00000516405 TSPOP30536 169 aa-2.51□□□□□ -2.81
RNU6-542P-201ENST00000516405 AKT2P31751 481 aa-2.51□□□□□ -2.81
RNU6-542P-201ENST00000516405 KIF5BP33176 963 aa-2.51□□□□□ -2.81
RNU6-542P-201ENST00000516405 RPL28P46779 137 aaKnown RBP-2.51□□□□□ -2.81
RNU6-542P-201ENST00000516405 TRIP10Q15642 601 aa-2.51□□□□□ -2.81
RNU6-542P-201ENST00000516405 DEFB109BQ30KR1 87 aa-2.51□□□□□ -2.81
RNU6-542P-201ENST00000516405 HSP90B2PQ58FF3 399 aa-2.51□□□□□ -2.81
RNU6-542P-201ENST00000516405 KCNIP4Q6PIL6 250 aa-2.51□□□□□ -2.81
RNU6-542P-201ENST00000516405 NPSR1Q6W5P4 371 aa-2.51□□□□□ -2.81
RNU6-542P-201ENST00000516405 SLC35E3Q7Z769 313 aa-2.51□□□□□ -2.81
RNU6-542P-201ENST00000516405 MRPL55Q7Z7F7 128 aaKnown RBP-2.51□□□□□ -2.81
RNU6-542P-201ENST00000516405 HORMAD1Q86X24 394 aa-2.51□□□□□ -2.81
RNU6-542P-201ENST00000516405 NIT1Q86X76 327 aa-2.51□□□□□ -2.81
RNU6-542P-201ENST00000516405 BBS5Q8N3I7 341 aa-2.51□□□□□ -2.81
RNU6-542P-201ENST00000516405 OR9K2Q8NGE7 335 aa-2.51□□□□□ -2.81
RNU6-542P-201ENST00000516405 OR1F12Q8NHA8 337 aa-2.51□□□□□ -2.81
RNU6-542P-201ENST00000516405 SFXN5Q8TD22 340 aa-2.51□□□□□ -2.81
RNU6-542P-201ENST00000516405 GIPC3Q8TF64 312 aa-2.51□□□□□ -2.81
RNU6-542P-201ENST00000516405 DEPDC1BQ8WUY9 529 aa-2.51□□□□□ -2.81
RNU6-542P-201ENST00000516405 ORAOV1Q8WV07 137 aa-2.51□□□□□ -2.81
RNU6-542P-201ENST00000516405 RSPH1Q8WYR4 309 aa-2.51□□□□□ -2.81
RNU6-542P-201ENST00000516405 TBRG4Q969Z0 631 aaKnown RBP eCLIP-2.51□□□□□ -2.81
RNU6-542P-201ENST00000516405 RIT2Q99578 217 aa-2.51□□□□□ -2.81
RNU6-542P-201ENST00000516405 DOHHQ9BU89 302 aa-2.51□□□□□ -2.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms