RNA–Protein interactions for RNA: ENST00000515418.1

CPNE4-213, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 1,958 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-213ENST00000515418 PNLIPRP3Q17RR3 467 aa7.76□□□□□ -1.17
CPNE4-213ENST00000515418 C1orf174Q8IYL3 243 aa7.76□□□□□ -1.17
CPNE4-213ENST00000515418 FAM58AQ8N1B3 248 aa7.76□□□□□ -1.17
CPNE4-213ENST00000515418 ZCCHC24Q8N2G6 241 aaKnown RBP7.76□□□□□ -1.17
CPNE4-213ENST00000515418 RNASE6Q93091 150 aaKnown RBP7.76□□□□□ -1.17
CPNE4-213ENST00000515418 OCSTAMPQ9BR26 566 aa7.76□□□□□ -1.17
CPNE4-213ENST00000515418 PKIBQ9C010 78 aa7.76□□□□□ -1.17
CPNE4-213ENST00000515418 WDR13Q9H1Z4 485 aa7.76□□□□□ -1.17
CPNE4-213ENST00000515418 CXXC4Q9H2H0 198 aa7.76□□□□□ -1.17
CPNE4-213ENST00000515418 KCNJ16Q9NPI9 418 aa7.76□□□□□ -1.17
CPNE4-213ENST00000515418 UTP20O75691 2785 aaKnown RBP7.76□□□□□ -1.17
CPNE4-213ENST00000515418 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.75□□□□□ -1.17
CPNE4-213ENST00000515418 SERPINE3A8MV23 424 aa7.75□□□□□ -1.17
CPNE4-213ENST00000515418 ZG16O60844 167 aa7.75□□□□□ -1.17
CPNE4-213ENST00000515418 TFF1P04155 84 aa7.75□□□□□ -1.17
CPNE4-213ENST00000515418 AMY2AP04746 511 aa7.75□□□□□ -1.17
CPNE4-213ENST00000515418 H2AFB2P0C5Z0 115 aa7.75□□□□□ -1.17
CPNE4-213ENST00000515418 ZNF735P0CB33 412 aa7.75□□□□□ -1.17
CPNE4-213ENST00000515418 FUT3P21217 361 aa7.75□□□□□ -1.17
CPNE4-213ENST00000515418 RCVRNP35243 200 aa7.75□□□□□ -1.17
CPNE4-213ENST00000515418 SSBP1Q04837 148 aaKnown RBP7.75□□□□□ -1.17
CPNE4-213ENST00000515418 IKZF1Q13422 519 aa7.75□□□□□ -1.17
CPNE4-213ENST00000515418 MICBQ29980 383 aa7.75□□□□□ -1.17
CPNE4-213ENST00000515418 FBXL19-AS1Q494R0 122 aa7.75□□□□□ -1.17
CPNE4-213ENST00000515418 C5orf24Q7Z6I8 188 aa7.75□□□□□ -1.17
CPNE4-213ENST00000515418 BEST4Q8NFU0 473 aa7.75□□□□□ -1.17
CPNE4-213ENST00000515418 OR4K15Q8NH41 348 aa7.75□□□□□ -1.17
CPNE4-213ENST00000515418 EMG1Q92979 244 aaKnown RBP7.75□□□□□ -1.17
CPNE4-213ENST00000515418 CREB3L1Q96BA8 519 aa7.75□□□□□ -1.17
CPNE4-213ENST00000515418 PLPPR2Q96GM1 343 aa7.75□□□□□ -1.17
CPNE4-213ENST00000515418 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.75□□□□□ -1.17
CPNE4-213ENST00000515418 ZNF701Q9NV72 531 aaPredicted RBP7.75□□□□□ -1.17
CPNE4-213ENST00000515418 NOP16Q9Y3C1 178 aaKnown RBP7.75□□□□□ -1.17
CPNE4-213ENST00000515418 ALG5Q9Y673 324 aa7.75□□□□□ -1.17
CPNE4-213ENST00000515418 USP9XQ93008 2570 aaPredicted RBP7.75□□□□□ -1.17
CPNE4-213ENST00000515418 IGLV3-9A0A075B6K5 115 aa7.75□□□□□ -1.17
CPNE4-213ENST00000515418 PLSCR5A0PG75 271 aa7.75□□□□□ -1.17
CPNE4-213ENST00000515418 NAP1L6A6NFF2 107 aa7.75□□□□□ -1.17
CPNE4-213ENST00000515418 ARPC1BO15143 372 aaKnown RBP7.75□□□□□ -1.17
CPNE4-213ENST00000515418 PDCD6O75340 191 aa7.75□□□□□ -1.17
CPNE4-213ENST00000515418 PLAUP00749 431 aa7.75□□□□□ -1.17
CPNE4-213ENST00000515418 CD74P04233 296 aa7.75□□□□□ -1.17
CPNE4-213ENST00000515418 OR4A8P0C604 315 aa7.75□□□□□ -1.17
CPNE4-213ENST00000515418 PPP3CBP16298 524 aa7.75□□□□□ -1.17
CPNE4-213ENST00000515418 ERVK11-1P61568 191 aa7.75□□□□□ -1.17
CPNE4-213ENST00000515418 ADIPOQQ15848 244 aa7.75□□□□□ -1.17
CPNE4-213ENST00000515418 SCGB2B2Q4G0G5 96 aa7.75□□□□□ -1.17
CPNE4-213ENST00000515418 BTN2A1Q7KYR7 527 aa7.75□□□□□ -1.17
CPNE4-213ENST00000515418 NUP37Q8NFH4 326 aa7.75□□□□□ -1.17
CPNE4-213ENST00000515418 RDH5Q92781 318 aa7.75□□□□□ -1.17
CPNE4-213ENST00000515418 ELMOD3Q96FG2 381 aa7.75□□□□□ -1.17
CPNE4-213ENST00000515418 C20orf85Q9H1P6 137 aa7.75□□□□□ -1.17
CPNE4-213ENST00000515418 ZNF442Q9H7R0 627 aa7.75□□□□□ -1.17
CPNE4-213ENST00000515418 ING3Q9NXR8 418 aa7.75□□□□□ -1.17
CPNE4-213ENST00000515418 TREM2Q9NZC2 230 aa7.75□□□□□ -1.17
CPNE4-213ENST00000515418 NDRG3Q9UGV2 375 aa7.75□□□□□ -1.17
CPNE4-213ENST00000515418 HSF4Q9ULV5 492 aa7.75□□□□□ -1.17
CPNE4-213ENST00000515418 NUBP2Q9Y5Y2 271 aa7.75□□□□□ -1.17
CPNE4-213ENST00000515418 ARFGEF3Q5TH69 2177 aa7.75□□□□□ -1.17
CPNE4-213ENST00000515418 AKAP6Q13023 2319 aa7.74□□□□□ -1.17
CPNE4-213ENST00000515418 A0A0A6YYJ9 748 aa7.74□□□□□ -1.17
CPNE4-213ENST00000515418 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.74□□□□□ -1.17
CPNE4-213ENST00000515418 A0A1B0GWJ7 208 aa7.74□□□□□ -1.17
CPNE4-213ENST00000515418 hCG_1807616A0A1W2PRN6 198 aa7.74□□□□□ -1.17
CPNE4-213ENST00000515418 TMEM210A6NLX4 147 aa7.74□□□□□ -1.17
CPNE4-213ENST00000515418 A8MV72 311 aaPredicted RBP7.74□□□□□ -1.17
CPNE4-213ENST00000515418 SHISA9B4DS77 424 aa7.74□□□□□ -1.17
CPNE4-213ENST00000515418 PYCARD-AS1I3L0S3 204 aa7.74□□□□□ -1.17
CPNE4-213ENST00000515418 SDCBPO00560 298 aaPredicted RBP7.74□□□□□ -1.17
CPNE4-213ENST00000515418 SIAH2O43255 324 aa7.74□□□□□ -1.17
CPNE4-213ENST00000515418 NXPH2O95156 264 aa7.74□□□□□ -1.17
CPNE4-213ENST00000515418 ZNF205O95201 554 aa7.74□□□□□ -1.17
CPNE4-213ENST00000515418 PGA5P0DJD9 388 aa7.74□□□□□ -1.17
CPNE4-213ENST00000515418 ANXA7P20073 488 aaKnown RBP7.74□□□□□ -1.17
CPNE4-213ENST00000515418 FAUP35544 74 aaKnown RBP7.74□□□□□ -1.17
CPNE4-213ENST00000515418 CEBPDP49716 269 aaPredicted RBP7.74□□□□□ -1.17
CPNE4-213ENST00000515418 RNASE10Q5GAN6 216 aaKnown RBP7.74□□□□□ -1.17
CPNE4-213ENST00000515418 NCMAPQ5T1S8 102 aa7.74□□□□□ -1.17
CPNE4-213ENST00000515418 C1QTNF12Q5T7M4 302 aa7.74□□□□□ -1.17
CPNE4-213ENST00000515418 AGAP6Q5VW22 663 aa7.74□□□□□ -1.17
CPNE4-213ENST00000515418 WDR82Q6UXN9 313 aa7.74□□□□□ -1.17
CPNE4-213ENST00000515418 Q6ZPA2 131 aa7.74□□□□□ -1.17
CPNE4-213ENST00000515418 IDO2Q6ZQW0 420 aa7.74□□□□□ -1.17
CPNE4-213ENST00000515418 HOGA1Q86XE5 327 aa7.74□□□□□ -1.17
CPNE4-213ENST00000515418 DMRTC2Q8IXT2 367 aaPredicted RBP7.74□□□□□ -1.17
CPNE4-213ENST00000515418 HPS1Q92902 700 aa7.74□□□□□ -1.17
CPNE4-213ENST00000515418 MRPL24Q96A35 216 aaKnown RBP7.74□□□□□ -1.17
CPNE4-213ENST00000515418 BBC3Q96PG8 261 aaPredicted RBP7.74□□□□□ -1.17
CPNE4-213ENST00000515418 OR2V2Q96R30 315 aa7.74□□□□□ -1.17
CPNE4-213ENST00000515418 CMSS1Q9BQ75 279 aaKnown RBP7.74□□□□□ -1.17
CPNE4-213ENST00000515418 NRIP2Q9BQI9 281 aa7.74□□□□□ -1.17
CPNE4-213ENST00000515418 GINS4Q9BRT9 223 aa7.74□□□□□ -1.17
CPNE4-213ENST00000515418 CHST6Q9GZX3 395 aa7.74□□□□□ -1.17
CPNE4-213ENST00000515418 C1orf123Q9NWV4 160 aa7.74□□□□□ -1.17
CPNE4-213ENST00000515418 COPZ2Q9P299 210 aa7.74□□□□□ -1.17
CPNE4-213ENST00000515418 RALYQ9UKM9 306 aaKnown RBP7.74□□□□□ -1.17
CPNE4-213ENST00000515418 POLDIP2Q9Y2S7 368 aa7.74□□□□□ -1.17
CPNE4-213ENST00000515418 DYSFO75923 2080 aa7.74□□□□□ -1.17
CPNE4-213ENST00000515418 TRAV24A0A0B4J272 114 aa7.73□□□□□ -1.17
CPNE4-213ENST00000515418 A0A1B0GUH1 482 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms