RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 ZNF701Q9NV72 531 aaPredicted RBP11.2□□□□□ -0.62
SMAD1-215ENST00000515385 NECAP2Q9NVZ3 263 aa11.2□□□□□ -0.62
SMAD1-215ENST00000515385 ANXA10Q9UJ72 324 aa11.2□□□□□ -0.62
SMAD1-215ENST00000515385 POLR3KQ9Y2Y1 108 aaPredicted RBP11.2□□□□□ -0.62
SMAD1-215ENST00000515385 SNRNP200O75643 2136 aaKnown RBP11.2□□□□□ -0.62
SMAD1-215ENST00000515385 FAM24AA6NFZ4 105 aa11.2□□□□□ -0.62
SMAD1-215ENST00000515385 GP1BBP13224 206 aa11.2□□□□□ -0.62
SMAD1-215ENST00000515385 RPL29P47914 159 aaKnown RBP11.2□□□□□ -0.62
SMAD1-215ENST00000515385 SEC13P55735 322 aa11.2□□□□□ -0.62
SMAD1-215ENST00000515385 HIST1H3AP68431 136 aa11.2□□□□□ -0.62
SMAD1-215ENST00000515385 ZNF705AQ6ZN79 300 aaPredicted RBP11.2□□□□□ -0.62
SMAD1-215ENST00000515385 SPRED2Q7Z698 418 aa11.2□□□□□ -0.62
SMAD1-215ENST00000515385 CCDC71LQ8N9Z2 235 aa11.2□□□□□ -0.62
SMAD1-215ENST00000515385 SLC38A9Q8NBW4 561 aa11.2□□□□□ -0.62
SMAD1-215ENST00000515385 NUDT10Q8NFP7 164 aa11.2□□□□□ -0.62
SMAD1-215ENST00000515385 BAHD1Q8TBE0 780 aaPredicted RBP11.2□□□□□ -0.62
SMAD1-215ENST00000515385 ADAMTS18Q8TE60 1221 aa11.2□□□□□ -0.62
SMAD1-215ENST00000515385 SSC4DQ8WTU2 575 aa11.2□□□□□ -0.62
SMAD1-215ENST00000515385 FAM3CQ92520 227 aa11.2□□□□□ -0.62
SMAD1-215ENST00000515385 FGF14Q92915 247 aa11.2□□□□□ -0.62
SMAD1-215ENST00000515385 MSI2Q96DH6 328 aaKnown RBP11.2□□□□□ -0.62
SMAD1-215ENST00000515385 MIEN1Q9BRT3 115 aa11.2□□□□□ -0.62
SMAD1-215ENST00000515385 LPAR2Q9HBW0 351 aa11.2□□□□□ -0.62
SMAD1-215ENST00000515385 SEMA5BQ9P283 1151 aa11.2□□□□□ -0.62
SMAD1-215ENST00000515385 NAT8Q9UHE5 227 aa11.2□□□□□ -0.62
SMAD1-215ENST00000515385 IGSF23A1L1A6 192 aa11.19□□□□□ -0.62
SMAD1-215ENST00000515385 NPIPB13A6NJU9 1138 aa11.19□□□□□ -0.62
SMAD1-215ENST00000515385 NPIPB4C9JG80 1138 aa11.19□□□□□ -0.62
SMAD1-215ENST00000515385 IFNA1P01562 189 aa11.19□□□□□ -0.62
SMAD1-215ENST00000515385 CXCL10P02778 98 aa11.19□□□□□ -0.62
SMAD1-215ENST00000515385 PGCP20142 388 aa11.19□□□□□ -0.62
SMAD1-215ENST00000515385 BRS3P32247 399 aa11.19□□□□□ -0.62
SMAD1-215ENST00000515385 GJA4P35212 333 aa11.19□□□□□ -0.62
SMAD1-215ENST00000515385 DAP3P51398 398 aaKnown RBP11.19□□□□□ -0.62
SMAD1-215ENST00000515385 TAS2R30P59541 319 aa11.19□□□□□ -0.62
SMAD1-215ENST00000515385 SP6Q3SY56 376 aa11.19□□□□□ -0.62
SMAD1-215ENST00000515385 ACTL10Q5JWF8 245 aa11.19□□□□□ -0.62
SMAD1-215ENST00000515385 SHISA5Q8N114 240 aa11.19□□□□□ -0.62
SMAD1-215ENST00000515385 CISD2Q8N5K1 135 aaKnown RBP11.19□□□□□ -0.62
SMAD1-215ENST00000515385 TMEM252Q8N6L7 170 aa11.19□□□□□ -0.62
SMAD1-215ENST00000515385 OR51E1Q8TCB6 317 aa11.19□□□□□ -0.62
SMAD1-215ENST00000515385 RNASE8Q8TDE3 154 aaKnown RBP11.19□□□□□ -0.62
SMAD1-215ENST00000515385 BTF3L4Q96K17 158 aa11.19□□□□□ -0.62
SMAD1-215ENST00000515385 CAPNS2Q96L46 248 aa11.19□□□□□ -0.62
SMAD1-215ENST00000515385 SPACA5Q96QH8 159 aa11.19□□□□□ -0.62
SMAD1-215ENST00000515385 GNG13Q9P2W3 67 aa11.19□□□□□ -0.62
SMAD1-215ENST00000515385 DEC1Q9P2X7 70 aa11.19□□□□□ -0.62
SMAD1-215ENST00000515385 LAMP3Q9UQV4 416 aa11.19□□□□□ -0.62
SMAD1-215ENST00000515385 PTRH2Q9Y3E5 179 aaKnown RBP11.19□□□□□ -0.62
SMAD1-215ENST00000515385 SPTBP11277 2137 aa11.19□□□□□ -0.62
SMAD1-215ENST00000515385 A0A1W2PP11 408 aa11.18□□□□□ -0.62
SMAD1-215ENST00000515385 NPIPB7O75200 414 aa11.18□□□□□ -0.62
SMAD1-215ENST00000515385 HPRT1P00492 218 aa11.18□□□□□ -0.62
SMAD1-215ENST00000515385 MMP7P09237 267 aaPredicted RBP11.18□□□□□ -0.62
SMAD1-215ENST00000515385 TMEM225BP0DP42 221 aa11.18□□□□□ -0.62
SMAD1-215ENST00000515385 CCL1P22362 96 aa11.18□□□□□ -0.62
SMAD1-215ENST00000515385 CD82P27701 267 aa11.18□□□□□ -0.62
SMAD1-215ENST00000515385 DRD3P35462 400 aa11.18□□□□□ -0.62
SMAD1-215ENST00000515385 NKX2-1P43699 371 aaPredicted RBP11.18□□□□□ -0.62
SMAD1-215ENST00000515385 TNFSF10P50591 281 aa11.18□□□□□ -0.62
SMAD1-215ENST00000515385 UCP3P55916 312 aa11.18□□□□□ -0.62
SMAD1-215ENST00000515385 ZP4Q12836 540 aa11.18□□□□□ -0.62
SMAD1-215ENST00000515385 P2RY6Q15077 328 aa11.18□□□□□ -0.62
SMAD1-215ENST00000515385 LEMD1Q68G75 181 aa11.18□□□□□ -0.62
SMAD1-215ENST00000515385 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.18□□□□□ -0.62
SMAD1-215ENST00000515385 NKX2-4Q9H2Z4 354 aa11.18□□□□□ -0.62
SMAD1-215ENST00000515385 TBC1D29Q9UFV1 150 aa11.18□□□□□ -0.62
SMAD1-215ENST00000515385 RNF150Q9ULK6 438 aa11.18□□□□□ -0.62
SMAD1-215ENST00000515385 ZFP30Q9Y2G7 519 aa11.18□□□□□ -0.62
SMAD1-215ENST00000515385 KLF8O95600 359 aaPredicted RBP11.18□□□□□ -0.62
SMAD1-215ENST00000515385 TYMSP04818 313 aa11.18□□□□□ -0.62
SMAD1-215ENST00000515385 DTYMKP23919 212 aa11.18□□□□□ -0.62
SMAD1-215ENST00000515385 NKAIN1Q4KMZ8 207 aa11.18□□□□□ -0.62
SMAD1-215ENST00000515385 COL5A1-AS1Q5SY13 56 aa11.18□□□□□ -0.62
SMAD1-215ENST00000515385 NCR3LG1Q68D85 454 aa11.18□□□□□ -0.62
SMAD1-215ENST00000515385 DOK3Q7L591 496 aa11.18□□□□□ -0.62
SMAD1-215ENST00000515385 AGBL5Q8NDL9 886 aa11.18□□□□□ -0.62
SMAD1-215ENST00000515385 OR51G1Q8NGK1 321 aa11.18□□□□□ -0.62
SMAD1-215ENST00000515385 OR5C1Q8NGR4 320 aa11.18□□□□□ -0.62
SMAD1-215ENST00000515385 GPR119Q8TDV5 335 aa11.18□□□□□ -0.62
SMAD1-215ENST00000515385 MBD3L1Q8WWY6 194 aa11.18□□□□□ -0.62
SMAD1-215ENST00000515385 ASB10Q8WXI3 467 aa11.18□□□□□ -0.62
SMAD1-215ENST00000515385 ELSPBP1Q96BH3 223 aa11.18□□□□□ -0.62
SMAD1-215ENST00000515385 ZNF524Q96C55 264 aa11.18□□□□□ -0.62
SMAD1-215ENST00000515385 THOC3Q96J01 351 aaKnown RBP11.18□□□□□ -0.62
SMAD1-215ENST00000515385 ZBP1Q9H171 429 aa11.18□□□□□ -0.62
SMAD1-215ENST00000515385 PRTFDC1Q9NRG1 225 aa11.18□□□□□ -0.62
SMAD1-215ENST00000515385 HEATR5AQ86XA9 2040 aa11.17□□□□□ -0.62
SMAD1-215ENST00000515385 TNFSF13O75888 250 aa11.17□□□□□ -0.62
SMAD1-215ENST00000515385 IL6RP08887 468 aaPredicted RBP11.17□□□□□ -0.62
SMAD1-215ENST00000515385 WNT5AP41221 380 aa11.17□□□□□ -0.62
SMAD1-215ENST00000515385 GALR1P47211 349 aa11.17□□□□□ -0.62
SMAD1-215ENST00000515385 DCAF7P61962 342 aa11.17□□□□□ -0.62
SMAD1-215ENST00000515385 IL24Q13007 206 aa11.17□□□□□ -0.62
SMAD1-215ENST00000515385 PLPP4Q5VZY2 271 aa11.17□□□□□ -0.62
SMAD1-215ENST00000515385 CYP2G1PQ6ZSU1 146 aa11.17□□□□□ -0.62
SMAD1-215ENST00000515385 C16orf82Q7Z2V1 217 aa11.17□□□□□ -0.62
SMAD1-215ENST00000515385 RNF144BQ7Z419 303 aa11.17□□□□□ -0.62
SMAD1-215ENST00000515385 MRGPRGQ86SM5 289 aa11.17□□□□□ -0.62
SMAD1-215ENST00000515385 TMEM171Q8WVE6 324 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms