RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 MPV17LQ2QL34 196 aa10.03□□□□□ -0.8
PDLIM5-220ENST00000514830 SLC22A6Q4U2R8 563 aa10.03□□□□□ -0.8
PDLIM5-220ENST00000514830 IDNKQ5T6J7 187 aa10.03□□□□□ -0.8
PDLIM5-220ENST00000514830 SHEQ5VZ18 495 aa10.03□□□□□ -0.8
PDLIM5-220ENST00000514830 STUMQ69YW2 141 aa10.03□□□□□ -0.8
PDLIM5-220ENST00000514830 CLEC2AQ6UVW9 174 aa10.03□□□□□ -0.8
PDLIM5-220ENST00000514830 OSR2Q8N2R0 312 aa10.03□□□□□ -0.8
PDLIM5-220ENST00000514830 FAM89BQ8N5H3 189 aa10.03□□□□□ -0.8
PDLIM5-220ENST00000514830 TMEM104Q8NE00 496 aa10.03□□□□□ -0.8
PDLIM5-220ENST00000514830 ANGPTL6Q8NI99 470 aa10.03□□□□□ -0.8
PDLIM5-220ENST00000514830 FAM168AQ92567 244 aa10.03□□□□□ -0.8
PDLIM5-220ENST00000514830 EMG1Q92979 244 aaKnown RBP10.03□□□□□ -0.8
PDLIM5-220ENST00000514830 Q96M66 194 aa10.03□□□□□ -0.8
PDLIM5-220ENST00000514830 ZNF488Q96MN9 340 aa10.03□□□□□ -0.8
PDLIM5-220ENST00000514830 NKX3-1Q99801 234 aaPredicted RBP10.03□□□□□ -0.8
PDLIM5-220ENST00000514830 TMEM165Q9HC07 324 aa10.03□□□□□ -0.8
PDLIM5-220ENST00000514830 TREM2Q9NZC2 230 aa10.03□□□□□ -0.8
PDLIM5-220ENST00000514830 NLKQ9UBE8 527 aa10.03□□□□□ -0.8
PDLIM5-220ENST00000514830 KAAG1Q9UBP8 84 aa10.03□□□□□ -0.8
PDLIM5-220ENST00000514830 RAB22AQ9UL26 194 aa10.03□□□□□ -0.8
PDLIM5-220ENST00000514830 WIPI2Q9Y4P8 454 aa10.03□□□□□ -0.8
PDLIM5-220ENST00000514830 CSMD2Q7Z408 3487 aa10.02□□□□□ -0.8
PDLIM5-220ENST00000514830 DOCK11Q5JSL3 2073 aa10.02□□□□□ -0.81
PDLIM5-220ENST00000514830 TMEM272A0A1B0GTI8 110 aa10.02□□□□□ -0.81
PDLIM5-220ENST00000514830 OR2AT4A6NND4 320 aa10.02□□□□□ -0.81
PDLIM5-220ENST00000514830 WNT9BO14905 357 aa10.02□□□□□ -0.81
PDLIM5-220ENST00000514830 HTR3BO95264 441 aa10.02□□□□□ -0.81
PDLIM5-220ENST00000514830 PSG2P11465 335 aa10.02□□□□□ -0.81
PDLIM5-220ENST00000514830 SLC25A16P16260 332 aa10.02□□□□□ -0.81
PDLIM5-220ENST00000514830 SERPINA2P20848 420 aa10.02□□□□□ -0.81
PDLIM5-220ENST00000514830 LMO1P25800 156 aa10.02□□□□□ -0.81
PDLIM5-220ENST00000514830 GPR6P46095 362 aaPredicted RBP10.02□□□□□ -0.81
PDLIM5-220ENST00000514830 CLDN12P56749 244 aa10.02□□□□□ -0.81
PDLIM5-220ENST00000514830 DCDC5Q6ZRR9 648 aa10.02□□□□□ -0.81
PDLIM5-220ENST00000514830 KRTAP1-3Q8IUG1 177 aa10.02□□□□□ -0.81
PDLIM5-220ENST00000514830 CHST4Q8NCG5 386 aa10.02□□□□□ -0.81
PDLIM5-220ENST00000514830 LGALS14Q8TCE9 139 aa10.02□□□□□ -0.81
PDLIM5-220ENST00000514830 SDSLQ96GA7 329 aa10.02□□□□□ -0.81
PDLIM5-220ENST00000514830 NUDT16L1Q9BRJ7 211 aaKnown RBP10.02□□□□□ -0.81
PDLIM5-220ENST00000514830 PIMREGQ9BSJ6 248 aa10.02□□□□□ -0.81
PDLIM5-220ENST00000514830 TMEM59Q9BXS4 323 aa10.02□□□□□ -0.81
PDLIM5-220ENST00000514830 ABCG5Q9H222 651 aa10.02□□□□□ -0.81
PDLIM5-220ENST00000514830 ELL3Q9HB65 397 aaPredicted RBP10.02□□□□□ -0.81
PDLIM5-220ENST00000514830 GLS2Q9UI32 602 aa10.02□□□□□ -0.81
PDLIM5-220ENST00000514830 ABCA2Q9BZC7 2435 aa10.02□□□□□ -0.81
PDLIM5-220ENST00000514830 IGKV1D-17A0A075B6S4 117 aa10.01□□□□□ -0.81
PDLIM5-220ENST00000514830 A0A0A6YYH2 397 aa10.01□□□□□ -0.81
PDLIM5-220ENST00000514830 A6NJ64 397 aa10.01□□□□□ -0.81
PDLIM5-220ENST00000514830 FOXI3A8MTJ6 420 aaPredicted RBP10.01□□□□□ -0.81
PDLIM5-220ENST00000514830 SH2D1BO14796 132 aa10.01□□□□□ -0.81
PDLIM5-220ENST00000514830 PPIHO43447 177 aaKnown RBP10.01□□□□□ -0.81
PDLIM5-220ENST00000514830 CRTAPO75718 401 aaPredicted RBP10.01□□□□□ -0.81
PDLIM5-220ENST00000514830 SCGNO76038 276 aa10.01□□□□□ -0.81
PDLIM5-220ENST00000514830 GLAP06280 429 aa10.01□□□□□ -0.81
PDLIM5-220ENST00000514830 SNRPBP14678 240 aaKnown RBP10.01□□□□□ -0.81
PDLIM5-220ENST00000514830 PRKACAP17612 351 aa10.01□□□□□ -0.81
PDLIM5-220ENST00000514830 CD80P33681 288 aa10.01□□□□□ -0.81
PDLIM5-220ENST00000514830 NR4A2P43354 598 aa10.01□□□□□ -0.81
PDLIM5-220ENST00000514830 PAX5Q02548 391 aa10.01□□□□□ -0.81
PDLIM5-220ENST00000514830 CLEC12BQ2HXU8 276 aa10.01□□□□□ -0.81
PDLIM5-220ENST00000514830 C11orf91Q3C1V1 193 aa10.01□□□□□ -0.81
PDLIM5-220ENST00000514830 FAM201AQ5SY85 155 aa10.01□□□□□ -0.81
PDLIM5-220ENST00000514830 Q6P435 159 aa10.01□□□□□ -0.81
PDLIM5-220ENST00000514830 MZT2AQ6P582 158 aa10.01□□□□□ -0.81
PDLIM5-220ENST00000514830 ZNF788Q6ZQV5 615 aa10.01□□□□□ -0.81
PDLIM5-220ENST00000514830 SPICQ8N5J4 248 aa10.01□□□□□ -0.81
PDLIM5-220ENST00000514830 OR10K1Q8NGX5 313 aa10.01□□□□□ -0.81
PDLIM5-220ENST00000514830 TMEM246Q9BRR3 403 aa10.01□□□□□ -0.81
PDLIM5-220ENST00000514830 URM1Q9BTM9 101 aaKnown RBP10.01□□□□□ -0.81
PDLIM5-220ENST00000514830 LPAR5Q9H1C0 372 aa10.01□□□□□ -0.81
PDLIM5-220ENST00000514830 MMP27Q9H306 513 aa10.01□□□□□ -0.81
PDLIM5-220ENST00000514830 SPACA1Q9HBV2 294 aa10.01□□□□□ -0.81
PDLIM5-220ENST00000514830 RCC2Q9P258 522 aaKnown RBP10.01□□□□□ -0.81
PDLIM5-220ENST00000514830 DNAJB11Q9UBS4 358 aa10.01□□□□□ -0.81
PDLIM5-220ENST00000514830 ST3GAL6Q9Y274 331 aa10.01□□□□□ -0.81
PDLIM5-220ENST00000514830 DSCAML1Q8TD84 2053 aa10.01□□□□□ -0.81
PDLIM5-220ENST00000514830 YLPM1P49750 1951 aaKnown RBP10.01□□□□□ -0.81
PDLIM5-220ENST00000514830 A0A0B4J203 849 aa10□□□□□ -0.81
PDLIM5-220ENST00000514830 A0A1W2PP11 408 aa10□□□□□ -0.81
PDLIM5-220ENST00000514830 F5H0A9 414 aaPredicted RBP10□□□□□ -0.81
PDLIM5-220ENST00000514830 C3orf80F5H4A9 247 aa10□□□□□ -0.81
PDLIM5-220ENST00000514830 TPPPO94811 219 aa10□□□□□ -0.81
PDLIM5-220ENST00000514830 MPIG6BO95866 241 aa10□□□□□ -0.81
PDLIM5-220ENST00000514830 PAHP00439 452 aa10□□□□□ -0.81
PDLIM5-220ENST00000514830 APOA1P02647 267 aa10□□□□□ -0.81
PDLIM5-220ENST00000514830 CHRM2P08172 466 aa10□□□□□ -0.81
PDLIM5-220ENST00000514830 CD99P14209 185 aa10□□□□□ -0.81
PDLIM5-220ENST00000514830 AMY2BP19961 511 aa10□□□□□ -0.81
PDLIM5-220ENST00000514830 PRDX2P32119 198 aa10□□□□□ -0.81
PDLIM5-220ENST00000514830 ART1P52961 327 aa10□□□□□ -0.81
PDLIM5-220ENST00000514830 UBE2NLQ5JXB2 153 aa10□□□□□ -0.81
PDLIM5-220ENST00000514830 Q5PR19 223 aa10□□□□□ -0.81
PDLIM5-220ENST00000514830 OR10K2Q6IF99 312 aa10□□□□□ -0.81
PDLIM5-220ENST00000514830 RAB12Q6IQ22 244 aa10□□□□□ -0.81
PDLIM5-220ENST00000514830 LINC00299Q6ZSB3 139 aa10□□□□□ -0.81
PDLIM5-220ENST00000514830 ZNF561Q8N587 486 aa10□□□□□ -0.81
PDLIM5-220ENST00000514830 OR5H6Q8NGV6 325 aa10□□□□□ -0.81
PDLIM5-220ENST00000514830 RAB40AQ8WXH6 277 aa10□□□□□ -0.81
PDLIM5-220ENST00000514830 SLC25A38Q96DW6 304 aa10□□□□□ -0.81
PDLIM5-220ENST00000514830 SEH1LQ96EE3 360 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms