RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 F8VVB4 439 aa12.77□□□□□ -0.37
VCAN-211ENST00000513984 F8VWA3 439 aa12.77□□□□□ -0.37
VCAN-211ENST00000513984 SDCBPO00560 298 aaPredicted RBP12.77□□□□□ -0.37
VCAN-211ENST00000513984 GSTT2P0CG29 244 aa12.77□□□□□ -0.37
VCAN-211ENST00000513984 FAM76BQ5HYJ3 339 aa12.77□□□□□ -0.37
VCAN-211ENST00000513984 UNQ6126/PRO20091Q6UXV3 157 aa12.77□□□□□ -0.37
VCAN-211ENST00000513984 LINC00596Q86U02 117 aa12.77□□□□□ -0.37
VCAN-211ENST00000513984 UXS1Q8NBZ7 420 aa12.77□□□□□ -0.37
VCAN-211ENST00000513984 ADAD2Q8NCV1 583 aaKnown RBP12.77□□□□□ -0.37
VCAN-211ENST00000513984 TMEM185AQ8NFB2 350 aa12.77□□□□□ -0.37
VCAN-211ENST00000513984 MARS2Q96GW9 593 aaKnown RBP12.77□□□□□ -0.37
VCAN-211ENST00000513984 RTL8AQ9BWD3 113 aa12.77□□□□□ -0.37
VCAN-211ENST00000513984 C1QTNF6Q9BXI9 259 aa12.77□□□□□ -0.37
VCAN-211ENST00000513984 PLK3Q9H4B4 646 aa12.77□□□□□ -0.37
VCAN-211ENST00000513984 RCC2Q9P258 522 aaKnown RBP12.77□□□□□ -0.37
VCAN-211ENST00000513984 SLC25A15Q9Y619 301 aa12.77□□□□□ -0.37
VCAN-211ENST00000513984 DMXL2Q8TDJ6 3036 aa12.77□□□□□ -0.37
VCAN-211ENST00000513984 C9orf170A2RU37 121 aa12.76□□□□□ -0.37
VCAN-211ENST00000513984 F5H5P2 479 aa12.76□□□□□ -0.37
VCAN-211ENST00000513984 J3QT63 122 aa12.76□□□□□ -0.37
VCAN-211ENST00000513984 ATP6V1G1O75348 118 aa12.76□□□□□ -0.37
VCAN-211ENST00000513984 SLC22A5O76082 557 aa12.76□□□□□ -0.37
VCAN-211ENST00000513984 NPY4RP50391 375 aa12.76□□□□□ -0.37
VCAN-211ENST00000513984 ARPC4P59998 168 aa12.76□□□□□ -0.37
VCAN-211ENST00000513984 DHODHQ02127 395 aa12.76□□□□□ -0.37
VCAN-211ENST00000513984 PSG7Q13046 419 aa12.76□□□□□ -0.37
VCAN-211ENST00000513984 SURF2Q15527 256 aaPredicted RBP12.76□□□□□ -0.37
VCAN-211ENST00000513984 ZNF474Q6S9Z5 364 aaPredicted RBP12.76□□□□□ -0.37
VCAN-211ENST00000513984 BATF2Q8N1L9 274 aa12.76□□□□□ -0.37
VCAN-211ENST00000513984 KLF14Q8TD94 323 aaPredicted RBP12.76□□□□□ -0.37
VCAN-211ENST00000513984 MITD1Q8WV92 249 aa12.76□□□□□ -0.37
VCAN-211ENST00000513984 DYRK2Q92630 601 aa12.76□□□□□ -0.37
VCAN-211ENST00000513984 HS3ST6Q96QI5 342 aa12.76□□□□□ -0.37
VCAN-211ENST00000513984 MICU1Q9BPX6 476 aa12.76□□□□□ -0.37
VCAN-211ENST00000513984 C5orf66Q9H5L9 145 aa12.76□□□□□ -0.37
VCAN-211ENST00000513984 RHOFQ9HBH0 211 aa12.76□□□□□ -0.37
VCAN-211ENST00000513984 C12orf4Q9NQ89 552 aa12.76□□□□□ -0.37
VCAN-211ENST00000513984 BSNQ9UPA5 3926 aa12.76□□□□□ -0.37
VCAN-211ENST00000513984 IGHV1-18A0A0C4DH31 117 aa12.76□□□□□ -0.37
VCAN-211ENST00000513984 LRP5LA4QPB2 252 aa12.76□□□□□ -0.37
VCAN-211ENST00000513984 RGS11O94810 467 aa12.76□□□□□ -0.37
VCAN-211ENST00000513984 CD34P28906 385 aa12.76□□□□□ -0.37
VCAN-211ENST00000513984 SNRPD2P62316 118 aaKnown RBP12.76□□□□□ -0.37
VCAN-211ENST00000513984 IL13RA1P78552 427 aa12.76□□□□□ -0.37
VCAN-211ENST00000513984 PDCD1Q15116 288 aa12.76□□□□□ -0.37
VCAN-211ENST00000513984 LY6G6FQ5SQ64 297 aa12.76□□□□□ -0.37
VCAN-211ENST00000513984 DCAF12L2Q5VW00 463 aa12.76□□□□□ -0.37
VCAN-211ENST00000513984 TMEM211Q6ICI0 200 aa12.76□□□□□ -0.37
VCAN-211ENST00000513984 BRICD5Q6PL45 260 aa12.76□□□□□ -0.37
VCAN-211ENST00000513984 GRPEL2Q8TAA5 225 aa12.76□□□□□ -0.37
VCAN-211ENST00000513984 TMPRSS13Q9BYE2 586 aa12.76□□□□□ -0.37
VCAN-211ENST00000513984 CEP295Q9C0D2 2601 aa12.75□□□□□ -0.37
VCAN-211ENST00000513984 IGHV2OR16-5A0A0B4J2B6 119 aa12.75□□□□□ -0.37
VCAN-211ENST00000513984 OR5H14A6NHG9 310 aa12.75□□□□□ -0.37
VCAN-211ENST00000513984 SIX6O95475 246 aa12.75□□□□□ -0.37
VCAN-211ENST00000513984 AKR1C4P17516 323 aa12.75□□□□□ -0.37
VCAN-211ENST00000513984 HLA-GP17693 338 aa12.75□□□□□ -0.37
VCAN-211ENST00000513984 OPRM1P35372 400 aa12.75□□□□□ -0.37
VCAN-211ENST00000513984 MPV17P39210 176 aa12.75□□□□□ -0.37
VCAN-211ENST00000513984 ECI1P42126 302 aa12.75□□□□□ -0.37
VCAN-211ENST00000513984 IL13RA2Q14627 380 aa12.75□□□□□ -0.37
VCAN-211ENST00000513984 ALKBH6Q3KRA9 238 aa12.75□□□□□ -0.37
VCAN-211ENST00000513984 TMEM128Q5BJH2 165 aa12.75□□□□□ -0.37
VCAN-211ENST00000513984 TIMM23BQ5SRD1 257 aa12.75□□□□□ -0.37
VCAN-211ENST00000513984 ZNF660Q6AZW8 331 aaPredicted RBP12.75□□□□□ -0.37
VCAN-211ENST00000513984 LPCAT3Q6P1A2 487 aa12.75□□□□□ -0.37
VCAN-211ENST00000513984 C11orf88Q6PI97 169 aa12.75□□□□□ -0.37
VCAN-211ENST00000513984 WDR86Q86TI4 376 aa12.75□□□□□ -0.37
VCAN-211ENST00000513984 C1orf174Q8IYL3 243 aa12.75□□□□□ -0.37
VCAN-211ENST00000513984 OR5M8Q8NGP6 311 aa12.75□□□□□ -0.37
VCAN-211ENST00000513984 TMEM230Q96A57 120 aa12.75□□□□□ -0.37
VCAN-211ENST00000513984 WDR89Q96FK6 387 aaPredicted RBP12.75□□□□□ -0.37
VCAN-211ENST00000513984 ADAT1Q9BUB4 502 aaKnown RBP12.75□□□□□ -0.37
VCAN-211ENST00000513984 BCL2L14Q9BZR8 327 aa12.75□□□□□ -0.37
VCAN-211ENST00000513984 ZNF442Q9H7R0 627 aa12.75□□□□□ -0.37
VCAN-211ENST00000513984 DUS4LO95620 317 aaKnown RBP12.74□□□□□ -0.37
VCAN-211ENST00000513984 GLI4P10075 376 aa12.74□□□□□ -0.37
VCAN-211ENST00000513984 PPP3CBP16298 524 aa12.74□□□□□ -0.37
VCAN-211ENST00000513984 PRKACAP17612 351 aa12.74□□□□□ -0.37
VCAN-211ENST00000513984 CALCRP30988 508 aa12.74□□□□□ -0.37
VCAN-211ENST00000513984 TMPRSS3P57727 454 aa12.74□□□□□ -0.37
VCAN-211ENST00000513984 SRSF4Q08170 494 aaKnown RBP12.74□□□□□ -0.37
VCAN-211ENST00000513984 C3P1Q6ZMU1 363 aa12.74□□□□□ -0.37
VCAN-211ENST00000513984 Q6ZPA2 131 aa12.74□□□□□ -0.37
VCAN-211ENST00000513984 CISD2Q8N5K1 135 aaKnown RBP12.74□□□□□ -0.37
VCAN-211ENST00000513984 PHB2Q99623 299 aa12.74□□□□□ -0.37
VCAN-211ENST00000513984 SLX1AQ9BQ83 275 aa12.74□□□□□ -0.37
VCAN-211ENST00000513984 RTBDNQ9BSG5 229 aaPredicted RBP12.74□□□□□ -0.37
VCAN-211ENST00000513984 ZNF286AQ9HBT8 521 aa12.74□□□□□ -0.37
VCAN-211ENST00000513984 DECR2Q9NUI1 292 aa12.74□□□□□ -0.37
VCAN-211ENST00000513984 NECAP2Q9NVZ3 263 aa12.74□□□□□ -0.37
VCAN-211ENST00000513984 IL36RNQ9UBH0 155 aa12.74□□□□□ -0.37
VCAN-211ENST00000513984 SHANK1Q9Y566 2161 aa12.74□□□□□ -0.37
VCAN-211ENST00000513984 OR5H8P0DN80 308 aa12.74□□□□□ -0.37
VCAN-211ENST00000513984 KITLGP21583 273 aa12.74□□□□□ -0.37
VCAN-211ENST00000513984 SRSF7Q16629 238 aaKnown RBP eCLIP12.74□□□□□ -0.37
VCAN-211ENST00000513984 C3orf36Q3SXR2 165 aa12.74□□□□□ -0.37
VCAN-211ENST00000513984 LGALSLQ3ZCW2 172 aaPredicted RBP12.74□□□□□ -0.37
VCAN-211ENST00000513984 Q6ZS49 121 aa12.74□□□□□ -0.37
VCAN-211ENST00000513984 FAM58AQ8N1B3 248 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms