RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 KLF14Q8TD94 323 aaPredicted RBP7.15□□□□□ -1.26
RNF4-220ENST00000513578 ZNF431Q8TF32 576 aaPredicted RBP7.15□□□□□ -1.26
RNF4-220ENST00000513578 SNRNP40Q96DI7 357 aaKnown RBP7.15□□□□□ -1.26
RNF4-220ENST00000513578 OR2A7Q96R45 310 aa7.15□□□□□ -1.26
RNF4-220ENST00000513578 CMSS1Q9BQ75 279 aaKnown RBP7.15□□□□□ -1.26
RNF4-220ENST00000513578 ZNF436Q9C0F3 470 aaPredicted RBP7.15□□□□□ -1.26
RNF4-220ENST00000513578 RANBP3Q9H6Z4 567 aaPredicted RBP7.15□□□□□ -1.26
RNF4-220ENST00000513578 SPACA1Q9HBV2 294 aa7.15□□□□□ -1.26
RNF4-220ENST00000513578 MTCH1Q9NZJ7 389 aa7.15□□□□□ -1.26
RNF4-220ENST00000513578 AK3Q9UIJ7 227 aa7.15□□□□□ -1.26
RNF4-220ENST00000513578 PURGQ9UJV8 347 aaKnown RBP7.15□□□□□ -1.26
RNF4-220ENST00000513578 TRBV6-6A0A0A6YYG2 114 aa7.14□□□□□ -1.27
RNF4-220ENST00000513578 A0A0B4J2A0 478 aa7.14□□□□□ -1.27
RNF4-220ENST00000513578 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.14□□□□□ -1.27
RNF4-220ENST00000513578 A0A1W2PR80 420 aa7.14□□□□□ -1.27
RNF4-220ENST00000513578 A8MV72 311 aaPredicted RBP7.14□□□□□ -1.27
RNF4-220ENST00000513578 GPR37O15354 613 aa7.14□□□□□ -1.27
RNF4-220ENST00000513578 LILRA1O75019 489 aa7.14□□□□□ -1.27
RNF4-220ENST00000513578 AGFG2O95081 481 aa7.14□□□□□ -1.27
RNF4-220ENST00000513578 PLATP00750 562 aa7.14□□□□□ -1.27
RNF4-220ENST00000513578 PMP2P02689 132 aa7.14□□□□□ -1.27
RNF4-220ENST00000513578 RLN1P04808 185 aa7.14□□□□□ -1.27
RNF4-220ENST00000513578 GIPP09681 153 aaPredicted RBP7.14□□□□□ -1.27
RNF4-220ENST00000513578 CXCL3P19876 107 aa7.14□□□□□ -1.27
RNF4-220ENST00000513578 CA6P23280 308 aa7.14□□□□□ -1.27
RNF4-220ENST00000513578 ZBTB25P24278 435 aa7.14□□□□□ -1.27
RNF4-220ENST00000513578 FPR2P25090 351 aa7.14□□□□□ -1.27
RNF4-220ENST00000513578 CALCRP30988 508 aa7.14□□□□□ -1.27
RNF4-220ENST00000513578 OR3A3P47888 321 aa7.14□□□□□ -1.27
RNF4-220ENST00000513578 ERVK11-1P61568 191 aa7.14□□□□□ -1.27
RNF4-220ENST00000513578 NAAAQ02083 359 aa7.14□□□□□ -1.27
RNF4-220ENST00000513578 SRSF4Q08170 494 aaKnown RBP7.14□□□□□ -1.27
RNF4-220ENST00000513578 MZT1Q08AG7 82 aa7.14□□□□□ -1.27
RNF4-220ENST00000513578 PIGYQ3MUY2 71 aa7.14□□□□□ -1.27
RNF4-220ENST00000513578 SHEQ5VZ18 495 aa7.14□□□□□ -1.27
RNF4-220ENST00000513578 DHRS11Q6UWP2 260 aa7.14□□□□□ -1.27
RNF4-220ENST00000513578 GFRALQ6UXV0 394 aa7.14□□□□□ -1.27
RNF4-220ENST00000513578 C3P1Q6ZMU1 363 aa7.14□□□□□ -1.27
RNF4-220ENST00000513578 RPRMLQ8N4K4 120 aa7.14□□□□□ -1.27
RNF4-220ENST00000513578 OR2AK2Q8NG84 335 aa7.14□□□□□ -1.27
RNF4-220ENST00000513578 ZFAND1Q8TCF1 268 aa7.14□□□□□ -1.27
RNF4-220ENST00000513578 SLAMF9Q96A28 289 aa7.14□□□□□ -1.27
RNF4-220ENST00000513578 MUCL1Q96DR8 90 aa7.14□□□□□ -1.27
RNF4-220ENST00000513578 DMRTB1Q96MA1 342 aa7.14□□□□□ -1.27
RNF4-220ENST00000513578 SULT4A1Q9BR01 284 aa7.14□□□□□ -1.27
RNF4-220ENST00000513578 SEC22CQ9BRL7 303 aa7.14□□□□□ -1.27
RNF4-220ENST00000513578 FAAP24Q9BTP7 215 aa7.14□□□□□ -1.27
RNF4-220ENST00000513578 TLNRD1Q9H1K6 362 aa7.14□□□□□ -1.27
RNF4-220ENST00000513578 PPA2Q9H2U2 334 aa7.14□□□□□ -1.27
RNF4-220ENST00000513578 RIMS4Q9H426 269 aaPredicted RBP7.14□□□□□ -1.27
RNF4-220ENST00000513578 DLL4Q9NR61 685 aa7.14□□□□□ -1.27
RNF4-220ENST00000513578 TMEM100Q9NV29 134 aa7.14□□□□□ -1.27
RNF4-220ENST00000513578 LUZP4Q9P127 313 aa7.14□□□□□ -1.27
RNF4-220ENST00000513578 SHPKQ9UHJ6 478 aa7.14□□□□□ -1.27
RNF4-220ENST00000513578 ANXA10Q9UJ72 324 aa7.14□□□□□ -1.27
RNF4-220ENST00000513578 POU2F3Q9UKI9 436 aa7.14□□□□□ -1.27
RNF4-220ENST00000513578 GPR132Q9UNW8 380 aa7.14□□□□□ -1.27
RNF4-220ENST00000513578 OSGIN2Q9Y236 505 aa7.14□□□□□ -1.27
RNF4-220ENST00000513578 VSIG4Q9Y279 399 aa7.14□□□□□ -1.27
RNF4-220ENST00000513578 POLDIP2Q9Y2S7 368 aa7.14□□□□□ -1.27
RNF4-220ENST00000513578 RAXQ9Y2V3 346 aa7.14□□□□□ -1.27
RNF4-220ENST00000513578 SPEF1Q9Y4P9 236 aa7.14□□□□□ -1.27
RNF4-220ENST00000513578 A0A0G2JNJ9 132 aa7.13□□□□□ -1.27
RNF4-220ENST00000513578 FAM172BPA6NC97 362 aa7.13□□□□□ -1.27
RNF4-220ENST00000513578 OR2AT4A6NND4 320 aa7.13□□□□□ -1.27
RNF4-220ENST00000513578 C1QTNF9BB2RNN3 333 aa7.13□□□□□ -1.27
RNF4-220ENST00000513578 RGS13O14921 159 aa7.13□□□□□ -1.27
RNF4-220ENST00000513578 FABP7O15540 132 aa7.13□□□□□ -1.27
RNF4-220ENST00000513578 SYNGR1O43759 233 aa7.13□□□□□ -1.27
RNF4-220ENST00000513578 RGS11O94810 467 aa7.13□□□□□ -1.27
RNF4-220ENST00000513578 PTBP3O95758 552 aaKnown RBP7.13□□□□□ -1.27
RNF4-220ENST00000513578 NAPSAO96009 420 aa7.13□□□□□ -1.27
RNF4-220ENST00000513578 FCGR3AP08637 254 aa7.13□□□□□ -1.27
RNF4-220ENST00000513578 PGA5P0DJD9 388 aa7.13□□□□□ -1.27
RNF4-220ENST00000513578 ZNF250P15622 560 aa7.13□□□□□ -1.27
RNF4-220ENST00000513578 GCH1P30793 250 aa7.13□□□□□ -1.27
RNF4-220ENST00000513578 GLRXP35754 106 aa7.13□□□□□ -1.27
RNF4-220ENST00000513578 MPV17P39210 176 aa7.13□□□□□ -1.27
RNF4-220ENST00000513578 RAP2BP61225 183 aa7.13□□□□□ -1.27
RNF4-220ENST00000513578 NKX6-1P78426 367 aaPredicted RBP7.13□□□□□ -1.27
RNF4-220ENST00000513578 MRPS15P82914 257 aaKnown RBP7.13□□□□□ -1.27
RNF4-220ENST00000513578 KLRB1Q12918 225 aa7.13□□□□□ -1.27
RNF4-220ENST00000513578 NKPD1Q17RQ9 610 aa7.13□□□□□ -1.27
RNF4-220ENST00000513578 CHRFAM7AQ494W8 412 aa7.13□□□□□ -1.27
RNF4-220ENST00000513578 SCGB2B2Q4G0G5 96 aa7.13□□□□□ -1.27
RNF4-220ENST00000513578 NKAPLQ5M9Q1 402 aa7.13□□□□□ -1.27
RNF4-220ENST00000513578 ZNF660Q6AZW8 331 aaPredicted RBP7.13□□□□□ -1.27
RNF4-220ENST00000513578 LPCAT3Q6P1A2 487 aa7.13□□□□□ -1.27
RNF4-220ENST00000513578 HAGHLQ6PII5 290 aaPredicted RBP7.13□□□□□ -1.27
RNF4-220ENST00000513578 LYG2Q86SG7 212 aa7.13□□□□□ -1.27
RNF4-220ENST00000513578 WDR86Q86TI4 376 aa7.13□□□□□ -1.27
RNF4-220ENST00000513578 FAM58AQ8N1B3 248 aa7.13□□□□□ -1.27
RNF4-220ENST00000513578 MUC20Q8N307 709 aaPredicted RBP7.13□□□□□ -1.27
RNF4-220ENST00000513578 C12orf45Q8N5I9 185 aaPredicted RBP7.13□□□□□ -1.27
RNF4-220ENST00000513578 KDF1Q8NAX2 398 aaPredicted RBP7.13□□□□□ -1.27
RNF4-220ENST00000513578 DACT3Q96B18 629 aaPredicted RBP7.13□□□□□ -1.27
RNF4-220ENST00000513578 S100PBPQ96BU1 408 aa7.13□□□□□ -1.27
RNF4-220ENST00000513578 RADILQ96JH8 1075 aa7.13□□□□□ -1.27
RNF4-220ENST00000513578 DMRTA2Q96SC8 542 aa7.13□□□□□ -1.27
RNF4-220ENST00000513578 VKORC1Q9BQB6 163 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms