RNA–Protein interactions for RNA: ENST00000512340.5

NR1I3-231, Transcript of nuclear receptor subfamily 1 group I member 3, human

TSL 1 (best)

Gene NR1I3, Length 891 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1I3-231	ENST00000512340	NUP50	Q9UKX7	468 aa		6.25	□□□□□ -1.41
NR1I3-231	ENST00000512340	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	6.25	□□□□□ -1.41
NR1I3-231	ENST00000512340	FN1	P02751	2386 aa	Known RBP	6.24	□□□□□ -1.41
NR1I3-231	ENST00000512340	FAM172BP	A6NC97	362 aa		6.24	□□□□□ -1.41
NR1I3-231	ENST00000512340		A6NIN4	97 aa		6.24	□□□□□ -1.41
NR1I3-231	ENST00000512340	FAM157A	C9JC47	383 aa		6.24	□□□□□ -1.41
NR1I3-231	ENST00000512340	INAFM1	C9JVW0	142 aa		6.24	□□□□□ -1.41
NR1I3-231	ENST00000512340		E9PI62	339 aa		6.24	□□□□□ -1.41
NR1I3-231	ENST00000512340		F5H0A9	414 aa	Predicted RBP	6.24	□□□□□ -1.41
NR1I3-231	ENST00000512340	TRIM77	I1YAP6	450 aa		6.24	□□□□□ -1.41
NR1I3-231	ENST00000512340	SH2D1B	O14796	132 aa		6.24	□□□□□ -1.41
NR1I3-231	ENST00000512340	ZNF780A	O75290	641 aa	Predicted RBP	6.24	□□□□□ -1.41
NR1I3-231	ENST00000512340	ARL6IP5	O75915	188 aa		6.24	□□□□□ -1.41
NR1I3-231	ENST00000512340	KNG1	P01042	644 aa		6.24	□□□□□ -1.41
NR1I3-231	ENST00000512340	CSTB	P04080	98 aa	Known RBP	6.24	□□□□□ -1.41
NR1I3-231	ENST00000512340	ALDOB	P05062	364 aa		6.24	□□□□□ -1.41
NR1I3-231	ENST00000512340	CHRM2	P08172	466 aa		6.24	□□□□□ -1.41
NR1I3-231	ENST00000512340	FAM157C	P0CG43	387 aa		6.24	□□□□□ -1.41
NR1I3-231	ENST00000512340	PGA5	P0DJD9	388 aa		6.24	□□□□□ -1.41
NR1I3-231	ENST00000512340	TMEM11	P17152	192 aa		6.24	□□□□□ -1.41
NR1I3-231	ENST00000512340	CRHBP	P24387	322 aa		6.24	□□□□□ -1.41
NR1I3-231	ENST00000512340	BDKRB2	P30411	391 aa		6.24	□□□□□ -1.41
NR1I3-231	ENST00000512340	IL2RG	P31785	369 aa		6.24	□□□□□ -1.41
NR1I3-231	ENST00000512340	SOX2	P48431	317 aa		6.24	□□□□□ -1.41
NR1I3-231	ENST00000512340	RSU1	Q15404	277 aa		6.24	□□□□□ -1.41
NR1I3-231	ENST00000512340	UBE2V2	Q15819	145 aa		6.24	□□□□□ -1.41
NR1I3-231	ENST00000512340	RGS21	Q2M5E4	152 aa		6.24	□□□□□ -1.41
NR1I3-231	ENST00000512340	ARMCX4	Q5H9R4	360 aa		6.24	□□□□□ -1.41
NR1I3-231	ENST00000512340	SPIN3	Q5JUX0	258 aa		6.24	□□□□□ -1.41
NR1I3-231	ENST00000512340	FAM120AOS	Q5T036	256 aa		6.24	□□□□□ -1.41
NR1I3-231	ENST00000512340	WDR25	Q64LD2	544 aa	Predicted RBP	6.24	□□□□□ -1.41
NR1I3-231	ENST00000512340	DMKN	Q6E0U4	476 aa	Predicted RBP	6.24	□□□□□ -1.41
NR1I3-231	ENST00000512340	RBMS3	Q6XE24	437 aa	Known RBP	6.24	□□□□□ -1.41
NR1I3-231	ENST00000512340	ZNF367	Q7RTV3	350 aa		6.24	□□□□□ -1.41
NR1I3-231	ENST00000512340	SATL1	Q86VE3	508 aa		6.24	□□□□□ -1.41
NR1I3-231	ENST00000512340	C11orf53	Q8IXP5	236 aa		6.24	□□□□□ -1.41
NR1I3-231	ENST00000512340	LINC00518	Q8N0U6	118 aa		6.24	□□□□□ -1.41
NR1I3-231	ENST00000512340	ZNF561	Q8N587	486 aa		6.24	□□□□□ -1.41
NR1I3-231	ENST00000512340	ST8SIA4	Q92187	359 aa		6.24	□□□□□ -1.41
NR1I3-231	ENST00000512340	EMG1	Q92979	244 aa	Known RBP	6.24	□□□□□ -1.41
NR1I3-231	ENST00000512340	FOXRED1	Q96CU9	486 aa	Predicted RBP	6.24	□□□□□ -1.41
NR1I3-231	ENST00000512340	ADAT3	Q96EY9	351 aa	Predicted RBP	6.24	□□□□□ -1.41
NR1I3-231	ENST00000512340	JMJD8	Q96S16	334 aa		6.24	□□□□□ -1.41
NR1I3-231	ENST00000512340	NRIP2	Q9BQI9	281 aa		6.24	□□□□□ -1.41
NR1I3-231	ENST00000512340	NUDT16L1	Q9BRJ7	211 aa	Known RBP	6.24	□□□□□ -1.41
NR1I3-231	ENST00000512340	ZNF649	Q9BS31	505 aa		6.24	□□□□□ -1.41
NR1I3-231	ENST00000512340	GON7	Q9BXV9	100 aa		6.24	□□□□□ -1.41
NR1I3-231	ENST00000512340	FAM234A	Q9H0X4	552 aa		6.24	□□□□□ -1.41
NR1I3-231	ENST00000512340	METTL17	Q9H7H0	456 aa	Predicted RBP	6.24	□□□□□ -1.41
NR1I3-231	ENST00000512340	ELL3	Q9HB65	397 aa	Predicted RBP	6.24	□□□□□ -1.41
NR1I3-231	ENST00000512340	CLEC2D	Q9UHP7	191 aa		6.24	□□□□□ -1.41
NR1I3-231	ENST00000512340	CHTOP	Q9Y3Y2	248 aa	Known RBP	6.24	□□□□□ -1.41
NR1I3-231	ENST00000512340	AUP1	Q9Y679	476 aa		6.24	□□□□□ -1.41
NR1I3-231	ENST00000512340	YLPM1	P49750	1951 aa	Known RBP	6.24	□□□□□ -1.41
NR1I3-231	ENST00000512340	VPS13C	Q709C8	3753 aa		6.23	□□□□□ -1.41
NR1I3-231	ENST00000512340	IGHV3OR15-7	A0A075B7D8	119 aa		6.23	□□□□□ -1.41
NR1I3-231	ENST00000512340	TRBV23-1	A0A0A0MS06	115 aa		6.23	□□□□□ -1.41
NR1I3-231	ENST00000512340	IGHV2-70D	A0A0C4DH43	119 aa		6.23	□□□□□ -1.41
NR1I3-231	ENST00000512340	KIR2DS1	A0A191URI9	304 aa		6.23	□□□□□ -1.41
NR1I3-231	ENST00000512340	PNMA8C	A0A1B0GUJ8	204 aa		6.23	□□□□□ -1.41
NR1I3-231	ENST00000512340		A0A1W2PQ09	198 aa		6.23	□□□□□ -1.41
NR1I3-231	ENST00000512340	DVL1	O14640	695 aa		6.23	□□□□□ -1.41
NR1I3-231	ENST00000512340	WNT9B	O14905	357 aa		6.23	□□□□□ -1.41
NR1I3-231	ENST00000512340	SIGLEC5	O15389	551 aa		6.23	□□□□□ -1.41
NR1I3-231	ENST00000512340	PHF1	O43189	567 aa	Predicted RBP	6.23	□□□□□ -1.41
NR1I3-231	ENST00000512340	PLAT	P00750	562 aa		6.23	□□□□□ -1.41
NR1I3-231	ENST00000512340	PPIAL4G	P0DN37	164 aa		6.23	□□□□□ -1.41
NR1I3-231	ENST00000512340	NDUFB7	P17568	137 aa		6.23	□□□□□ -1.41
NR1I3-231	ENST00000512340	ANOS1	P23352	680 aa		6.23	□□□□□ -1.41
NR1I3-231	ENST00000512340	PRDX2	P32119	198 aa		6.23	□□□□□ -1.41
NR1I3-231	ENST00000512340	ZNF93	P35789	620 aa	Predicted RBP	6.23	□□□□□ -1.41
NR1I3-231	ENST00000512340	TGFBR2	P37173	567 aa		6.23	□□□□□ -1.41
NR1I3-231	ENST00000512340	MTNR1B	P49286	362 aa		6.23	□□□□□ -1.41
NR1I3-231	ENST00000512340	AP2S1	P53680	142 aa	Predicted RBP	6.23	□□□□□ -1.41
NR1I3-231	ENST00000512340	CAV3	P56539	151 aa		6.23	□□□□□ -1.41
NR1I3-231	ENST00000512340	MLLT11	Q13015	90 aa	Predicted RBP	6.23	□□□□□ -1.41
NR1I3-231	ENST00000512340	PDZK1IP1	Q13113	114 aa		6.23	□□□□□ -1.41
NR1I3-231	ENST00000512340	IKZF1	Q13422	519 aa		6.23	□□□□□ -1.41
NR1I3-231	ENST00000512340	DOC2B	Q14184	412 aa		6.23	□□□□□ -1.41
NR1I3-231	ENST00000512340	KISS1	Q15726	138 aa		6.23	□□□□□ -1.41
NR1I3-231	ENST00000512340	TBCE	Q15813	527 aa	Predicted RBP	6.23	□□□□□ -1.41
NR1I3-231	ENST00000512340	FAM201A	Q5SY85	155 aa		6.23	□□□□□ -1.41
NR1I3-231	ENST00000512340	DDI2	Q5TDH0	399 aa		6.23	□□□□□ -1.41
NR1I3-231	ENST00000512340	GPR157	Q5UAW9	335 aa		6.23	□□□□□ -1.41
NR1I3-231	ENST00000512340	GLT8D1	Q68CQ7	371 aa		6.23	□□□□□ -1.41
NR1I3-231	ENST00000512340	STUM	Q69YW2	141 aa		6.23	□□□□□ -1.41
NR1I3-231	ENST00000512340	ACP7	Q6ZNF0	438 aa		6.23	□□□□□ -1.41
NR1I3-231	ENST00000512340	WDR86	Q86TI4	376 aa		6.23	□□□□□ -1.41
NR1I3-231	ENST00000512340	ANGPTL5	Q86XS5	388 aa		6.23	□□□□□ -1.41
NR1I3-231	ENST00000512340	FAM58A	Q8N1B3	248 aa		6.23	□□□□□ -1.41
NR1I3-231	ENST00000512340	MINDY2	Q8NBR6	621 aa		6.23	□□□□□ -1.41
NR1I3-231	ENST00000512340	CHST4	Q8NCG5	386 aa		6.23	□□□□□ -1.41
NR1I3-231	ENST00000512340	TMEM185A	Q8NFB2	350 aa		6.23	□□□□□ -1.41
NR1I3-231	ENST00000512340	RPS4Y2	Q8TD47	263 aa		6.23	□□□□□ -1.41
NR1I3-231	ENST00000512340	ZNF418	Q8TF45	676 aa	Predicted RBP	6.23	□□□□□ -1.41
NR1I3-231	ENST00000512340	CHPT1	Q8WUD6	406 aa		6.23	□□□□□ -1.41
NR1I3-231	ENST00000512340	H1FX	Q92522	213 aa	Known RBP	6.23	□□□□□ -1.41
NR1I3-231	ENST00000512340	CCL13	Q99616	98 aa		6.23	□□□□□ -1.41
NR1I3-231	ENST00000512340	METTL9	Q9H1A3	318 aa		6.23	□□□□□ -1.41
NR1I3-231	ENST00000512340	SEBOX	Q9HB31	216 aa	Predicted RBP	6.23	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms