RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 Q499Y3 187 aa1.6□□□□□ -2.15
CHD1-207ENST00000511628 TPGS1Q6ZTW0 290 aa1.6□□□□□ -2.15
CHD1-207ENST00000511628 DRAXINQ8NBI3 349 aaPredicted RBP1.6□□□□□ -2.15
CHD1-207ENST00000511628 OR51Q1Q8NH59 317 aa1.6□□□□□ -2.15
CHD1-207ENST00000511628 BLNKQ8WV28 456 aa1.6□□□□□ -2.15
CHD1-207ENST00000511628 RBPMSQ93062 196 aaKnown RBP1.6□□□□□ -2.15
CHD1-207ENST00000511628 SEC22CQ9BRL7 303 aa1.6□□□□□ -2.15
CHD1-207ENST00000511628 SHANK2-AS3Q9BTD1 123 aa1.6□□□□□ -2.15
CHD1-207ENST00000511628 ZNF436Q9C0F3 470 aaPredicted RBP1.6□□□□□ -2.15
CHD1-207ENST00000511628 NXF2Q9GZY0 626 aaKnown RBP1.6□□□□□ -2.15
CHD1-207ENST00000511628 TMBIM4Q9HC24 238 aa1.6□□□□□ -2.15
CHD1-207ENST00000511628 ABCB9Q9NP78 766 aa1.6□□□□□ -2.15
CHD1-207ENST00000511628 IFT46Q9NQC8 304 aa1.6□□□□□ -2.15
CHD1-207ENST00000511628 NLE1Q9NVX2 485 aaPredicted RBP1.6□□□□□ -2.15
CHD1-207ENST00000511628 RBM22Q9NW64 420 aaKnown RBP eCLIP1.6□□□□□ -2.15
CHD1-207ENST00000511628 MAT2BQ9NZL9 334 aa1.6□□□□□ -2.15
CHD1-207ENST00000511628 ENPP5Q9UJA9 477 aa1.6□□□□□ -2.15
CHD1-207ENST00000511628 SEC16AO15027 2179 aa1.59□□□□□ -2.15
CHD1-207ENST00000511628 ZNF879B4DU55 563 aa1.59□□□□□ -2.15
CHD1-207ENST00000511628 CDIPTO14735 213 aa1.59□□□□□ -2.15
CHD1-207ENST00000511628 TCAPO15273 167 aa1.59□□□□□ -2.15
CHD1-207ENST00000511628 GYG2O15488 501 aa1.59□□□□□ -2.15
CHD1-207ENST00000511628 APOA1P02647 267 aa1.59□□□□□ -2.15
CHD1-207ENST00000511628 SLC6A1P30531 599 aa1.59□□□□□ -2.15
CHD1-207ENST00000511628 MAGEA3P43357 314 aa1.59□□□□□ -2.15
CHD1-207ENST00000511628 DNASE1L1P49184 302 aa1.59□□□□□ -2.15
CHD1-207ENST00000511628 SLC18A1P54219 525 aa1.59□□□□□ -2.15
CHD1-207ENST00000511628 RAB38P57729 211 aa1.59□□□□□ -2.15
CHD1-207ENST00000511628 STX3Q13277 289 aa1.59□□□□□ -2.15
CHD1-207ENST00000511628 KRTAP5-7Q6L8G8 165 aa1.59□□□□□ -2.15
CHD1-207ENST00000511628 CLEC18BQ6UXF7 455 aa1.59□□□□□ -2.15
CHD1-207ENST00000511628 TRMT10CQ7L0Y3 403 aaKnown RBP1.59□□□□□ -2.15
CHD1-207ENST00000511628 COPS6Q7L5N1 327 aa1.59□□□□□ -2.15
CHD1-207ENST00000511628 GALNT10Q86SR1 603 aa1.59□□□□□ -2.15
CHD1-207ENST00000511628 LINC00596Q86U02 117 aa1.59□□□□□ -2.15
CHD1-207ENST00000511628 MARCH3Q86UD3 253 aa1.59□□□□□ -2.15
CHD1-207ENST00000511628 TCAIMQ8N3R3 496 aa1.59□□□□□ -2.15
CHD1-207ENST00000511628 SPICQ8N5J4 248 aa1.59□□□□□ -2.15
CHD1-207ENST00000511628 SPERTQ8NA61 448 aa1.59□□□□□ -2.15
CHD1-207ENST00000511628 C1orf64Q8NEQ6 169 aa1.59□□□□□ -2.15
CHD1-207ENST00000511628 OR4C13Q8NGP0 309 aa1.59□□□□□ -2.15
CHD1-207ENST00000511628 OR2Y1Q8NGV0 311 aa1.59□□□□□ -2.15
CHD1-207ENST00000511628 OR5H2Q8NGV7 314 aa1.59□□□□□ -2.15
CHD1-207ENST00000511628 OR8K3Q8NH51 312 aa1.59□□□□□ -2.15
CHD1-207ENST00000511628 UBA3Q8TBC4 463 aa1.59□□□□□ -2.15
CHD1-207ENST00000511628 PPP1R36Q96LQ0 422 aa1.59□□□□□ -2.15
CHD1-207ENST00000511628 OR2M4Q96R27 311 aa1.59□□□□□ -2.15
CHD1-207ENST00000511628 PEBP4Q96S96 227 aa1.59□□□□□ -2.15
CHD1-207ENST00000511628 SRRQ9GZT4 340 aa1.59□□□□□ -2.15
CHD1-207ENST00000511628 SDHAF3Q9NRP4 125 aa1.59□□□□□ -2.15
CHD1-207ENST00000511628 SLC22A7Q9Y694 548 aa1.59□□□□□ -2.15
CHD1-207ENST00000511628 VWA8A3KMH1 1905 aa1.59□□□□□ -2.15
CHD1-207ENST00000511628 CACNA1DQ01668 2161 aa1.58□□□□□ -2.16
CHD1-207ENST00000511628 IGKV1OR2-108A0A075B7D4 117 aa1.58□□□□□ -2.16
CHD1-207ENST00000511628 ERICH4A6NGS2 130 aa1.58□□□□□ -2.16
CHD1-207ENST00000511628 H3BP45 60 aa1.58□□□□□ -2.16
CHD1-207ENST00000511628 K7EPK0 472 aa1.58□□□□□ -2.16
CHD1-207ENST00000511628 KCNK2O95069 426 aa1.58□□□□□ -2.16
CHD1-207ENST00000511628 CDK1P06493 297 aa1.58□□□□□ -2.16
CHD1-207ENST00000511628 PFN1P07737 140 aaKnown RBP1.58□□□□□ -2.16
CHD1-207ENST00000511628 GIMD1P0DJR0 217 aa1.58□□□□□ -2.16
CHD1-207ENST00000511628 INAFM2P0DMQ5 153 aa1.58□□□□□ -2.16
CHD1-207ENST00000511628 IMPA1P29218 277 aa1.58□□□□□ -2.16
CHD1-207ENST00000511628 IL12BP29460 328 aa1.58□□□□□ -2.16
CHD1-207ENST00000511628 TGFBR2P37173 567 aa1.58□□□□□ -2.16
CHD1-207ENST00000511628 LGALS7P47929 136 aa1.58□□□□□ -2.16
CHD1-207ENST00000511628 KCNJ3P48549 501 aa1.58□□□□□ -2.16
CHD1-207ENST00000511628 XKP51811 444 aa1.58□□□□□ -2.16
CHD1-207ENST00000511628 AQP5P55064 265 aa1.58□□□□□ -2.16
CHD1-207ENST00000511628 RPS11P62280 158 aaKnown RBP eCLIP1.58□□□□□ -2.16
CHD1-207ENST00000511628 FMODQ06828 376 aa1.58□□□□□ -2.16
CHD1-207ENST00000511628 CLEC12AQ5QGZ9 265 aa1.58□□□□□ -2.16
CHD1-207ENST00000511628 LDLRAD2Q5SZI1 272 aa1.58□□□□□ -2.16
CHD1-207ENST00000511628 UGT2A3Q6UWM9 527 aa1.58□□□□□ -2.16
CHD1-207ENST00000511628 AHSA2Q719I0 299 aa1.58□□□□□ -2.16
CHD1-207ENST00000511628 ADM2Q7Z4H4 148 aa1.58□□□□□ -2.16
CHD1-207ENST00000511628 TMEM144Q7Z5S9 345 aa1.58□□□□□ -2.16
CHD1-207ENST00000511628 TMEM25Q86YD3 366 aa1.58□□□□□ -2.16
CHD1-207ENST00000511628 LINC00304Q8N9R0 145 aa1.58□□□□□ -2.16
CHD1-207ENST00000511628 OR8G5Q8NG78 346 aa1.58□□□□□ -2.16
CHD1-207ENST00000511628 OR8S1Q8NH09 359 aa1.58□□□□□ -2.16
CHD1-207ENST00000511628 ZMYND19Q96E35 227 aaPredicted RBP1.58□□□□□ -2.16
CHD1-207ENST00000511628 BIRC8Q96P09 236 aa1.58□□□□□ -2.16
CHD1-207ENST00000511628 LINC01587Q99440 93 aa1.58□□□□□ -2.16
CHD1-207ENST00000511628 THTPAQ9BU02 230 aa1.58□□□□□ -2.16
CHD1-207ENST00000511628 C1orf50Q9BV19 199 aa1.58□□□□□ -2.16
CHD1-207ENST00000511628 PLA2G12AQ9BZM1 189 aa1.58□□□□□ -2.16
CHD1-207ENST00000511628 API5Q9BZZ5 524 aaKnown RBP1.58□□□□□ -2.16
CHD1-207ENST00000511628 WDR55Q9H6Y2 383 aaPredicted RBP1.58□□□□□ -2.16
CHD1-207ENST00000511628 OR2S2Q9NQN1 319 aa1.58□□□□□ -2.16
CHD1-207ENST00000511628 ZNF492Q9P255 531 aa1.58□□□□□ -2.16
CHD1-207ENST00000511628 NUP205Q92621 2012 aa1.57□□□□□ -2.16
CHD1-207ENST00000511628 GOLGA8QA0A0J9YX86 632 aa1.57□□□□□ -2.16
CHD1-207ENST00000511628 MYBPHLA2RUH7 354 aa1.57□□□□□ -2.16
CHD1-207ENST00000511628 C9JQL5 133 aa1.57□□□□□ -2.16
CHD1-207ENST00000511628 F8VP50 259 aa1.57□□□□□ -2.16
CHD1-207ENST00000511628 PLPP3O14495 311 aa1.57□□□□□ -2.16
CHD1-207ENST00000511628 CBR3O75828 277 aa1.57□□□□□ -2.16
CHD1-207ENST00000511628 MYO1DO94832 1006 aa1.57□□□□□ -2.16
CHD1-207ENST00000511628 IGHG2P01859 326 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms