RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 TMEM268Q5VZI3 342 aa15.51■□□□□ 0.07
CCHCR1-228ENST00000509552 TMEM211Q6ICI0 200 aa15.51■□□□□ 0.07
CCHCR1-228ENST00000509552 LDLRAD3Q86YD5 345 aa15.51■□□□□ 0.07
CCHCR1-228ENST00000509552 SPSB4Q96A44 273 aa15.51■□□□□ 0.07
CCHCR1-228ENST00000509552 ZPBPQ9BS86 351 aa15.51■□□□□ 0.07
CCHCR1-228ENST00000509552 TLNRD1Q9H1K6 362 aa15.51■□□□□ 0.07
CCHCR1-228ENST00000509552 SLC2A9Q9NRM0 540 aa15.51■□□□□ 0.07
CCHCR1-228ENST00000509552 LRFN1Q9P244 771 aa15.51■□□□□ 0.07
CCHCR1-228ENST00000509552 NSG2Q9Y328 171 aa15.51■□□□□ 0.07
CCHCR1-228ENST00000509552 FBXO24O75426 580 aa15.51■□□□□ 0.07
CCHCR1-228ENST00000509552 LPAR6P43657 344 aa15.51■□□□□ 0.07
CCHCR1-228ENST00000509552 TSPO2Q5TGU0 170 aa15.51■□□□□ 0.07
CCHCR1-228ENST00000509552 LIAT1Q6ZQX7 453 aa15.51■□□□□ 0.07
CCHCR1-228ENST00000509552 TIPARPQ7Z3E1 657 aaKnown RBP15.51■□□□□ 0.07
CCHCR1-228ENST00000509552 LRTM2Q8N967 370 aa15.51■□□□□ 0.07
CCHCR1-228ENST00000509552 CCDC71LQ8N9Z2 235 aa15.51■□□□□ 0.07
CCHCR1-228ENST00000509552 IGHV3-9P01782 118 aa15.5■□□□□ 0.07
CCHCR1-228ENST00000509552 PMELP40967 661 aa15.5■□□□□ 0.07
CCHCR1-228ENST00000509552 UCP3P55916 312 aa15.5■□□□□ 0.07
CCHCR1-228ENST00000509552 HERV-K104P61576 105 aa15.5■□□□□ 0.07
CCHCR1-228ENST00000509552 LGI3Q8N145 548 aa15.5■□□□□ 0.07
CCHCR1-228ENST00000509552 ZNF611Q8N823 705 aa15.5■□□□□ 0.07
CCHCR1-228ENST00000509552 MOB3AQ96BX8 217 aa15.5■□□□□ 0.07
CCHCR1-228ENST00000509552 POM121Q96HA1 1249 aa15.5■□□□□ 0.07
CCHCR1-228ENST00000509552 STRADBQ9C0K7 418 aa15.5■□□□□ 0.07
CCHCR1-228ENST00000509552 PARP11Q9NR21 331 aa15.5■□□□□ 0.07
CCHCR1-228ENST00000509552 ATPIF1Q9UII2 106 aa15.5■□□□□ 0.07
CCHCR1-228ENST00000509552 FBXO9Q9UK97 447 aaPredicted RBP15.5■□□□□ 0.07
CCHCR1-228ENST00000509552 AMDHD2Q9Y303 409 aa15.5■□□□□ 0.07
CCHCR1-228ENST00000509552 STARD10Q9Y365 291 aa15.5■□□□□ 0.07
CCHCR1-228ENST00000509552 TNRC18O15417 2968 aaPredicted RBP15.5■□□□□ 0.07
CCHCR1-228ENST00000509552 OR7C1O76099 320 aaPredicted RBP15.5■□□□□ 0.07
CCHCR1-228ENST00000509552 MBPP02686 304 aaPredicted RBP15.5■□□□□ 0.07
CCHCR1-228ENST00000509552 FOXO1Q12778 655 aa15.5■□□□□ 0.07
CCHCR1-228ENST00000509552 PDCD1Q15116 288 aa15.5■□□□□ 0.07
CCHCR1-228ENST00000509552 SWI5Q1ZZU3 235 aa15.5■□□□□ 0.07
CCHCR1-228ENST00000509552 SPINK14Q6IE38 97 aa15.5■□□□□ 0.07
CCHCR1-228ENST00000509552 SLC25A26Q70HW3 274 aa15.5■□□□□ 0.07
CCHCR1-228ENST00000509552 LYZL2Q7Z4W2 148 aa15.5■□□□□ 0.07
CCHCR1-228ENST00000509552 C1orf210Q8IVY1 113 aa15.5■□□□□ 0.07
CCHCR1-228ENST00000509552 CPEB3Q8NE35 698 aaKnown RBP15.5■□□□□ 0.07
CCHCR1-228ENST00000509552 OR5L1Q8NGL2 311 aa15.5■□□□□ 0.07
CCHCR1-228ENST00000509552 THOC3Q96J01 351 aaKnown RBP15.5■□□□□ 0.07
CCHCR1-228ENST00000509552 SMIM3Q9BZL3 60 aa15.5■□□□□ 0.07
CCHCR1-228ENST00000509552 PRDM6Q9NQX0 595 aa15.5■□□□□ 0.07
CCHCR1-228ENST00000509552 NDRG3Q9UGV2 375 aa15.5■□□□□ 0.07
CCHCR1-228ENST00000509552 ZNF587BE7ETH6 402 aa15.49■□□□□ 0.07
CCHCR1-228ENST00000509552 F2RL1P55085 397 aa15.49■□□□□ 0.07
CCHCR1-228ENST00000509552 TMEM88Q6PEY1 159 aa15.49■□□□□ 0.07
CCHCR1-228ENST00000509552 CALHM1Q8IU99 346 aa15.49■□□□□ 0.07
CCHCR1-228ENST00000509552 UBAC2Q8NBM4 344 aa15.49■□□□□ 0.07
CCHCR1-228ENST00000509552 PSMF1Q92530 271 aa15.49■□□□□ 0.07
CCHCR1-228ENST00000509552 WNT2BQ93097 391 aa15.49■□□□□ 0.07
CCHCR1-228ENST00000509552 NRIP2Q9BQI9 281 aa15.49■□□□□ 0.07
CCHCR1-228ENST00000509552 FAM96BQ9Y3D0 163 aa15.49■□□□□ 0.07
CCHCR1-228ENST00000509552 IGKV3D-15A0A087WSY6 115 aa15.49■□□□□ 0.07
CCHCR1-228ENST00000509552 H7C1Q1 480 aa15.49■□□□□ 0.07
CCHCR1-228ENST00000509552 H7C2Y5 167 aa15.49■□□□□ 0.07
CCHCR1-228ENST00000509552 MUC1P15941 1255 aaPredicted RBP15.49■□□□□ 0.07
CCHCR1-228ENST00000509552 DUSP1P28562 367 aa15.49■□□□□ 0.07
CCHCR1-228ENST00000509552 C18orf12Q96KH6 178 aa15.49■□□□□ 0.07
CCHCR1-228ENST00000509552 TAAR9Q96RI9 348 aa15.49■□□□□ 0.07
CCHCR1-228ENST00000509552 FAM173AQ9BQD7 235 aa15.49■□□□□ 0.07
CCHCR1-228ENST00000509552 ADAT1Q9BUB4 502 aaKnown RBP15.49■□□□□ 0.07
CCHCR1-228ENST00000509552 LINC00470Q9BZP3 86 aa15.49■□□□□ 0.07
CCHCR1-228ENST00000509552 SMOC1Q9H4F8 434 aa15.49■□□□□ 0.07
CCHCR1-228ENST00000509552 B4GALT7Q9UBV7 327 aa15.49■□□□□ 0.07
CCHCR1-228ENST00000509552 RNASEK-C17orf49H0YIS7 233 aa15.48■□□□□ 0.07
CCHCR1-228ENST00000509552 ARF1P84077 181 aaKnown RBP15.48■□□□□ 0.07
CCHCR1-228ENST00000509552 FLI1Q01543 452 aaPredicted RBP15.48■□□□□ 0.07
CCHCR1-228ENST00000509552 SRYQ05066 204 aa15.48■□□□□ 0.07
CCHCR1-228ENST00000509552 BTNL8Q6UX41 500 aa15.48■□□□□ 0.07
CCHCR1-228ENST00000509552 COLCA1Q6ZS62 124 aa15.48■□□□□ 0.07
CCHCR1-228ENST00000509552 RAB11FIP2Q7L804 512 aa15.48■□□□□ 0.07
CCHCR1-228ENST00000509552 RCC2Q9P258 522 aaKnown RBP15.48■□□□□ 0.07
CCHCR1-228ENST00000509552 BORCS7-ASMTA0A0B4J1R7 106 aa15.48■□□□□ 0.07
CCHCR1-228ENST00000509552 PHF1O43189 567 aaPredicted RBP15.48■□□□□ 0.07
CCHCR1-228ENST00000509552 CCNOP22674 350 aa15.48■□□□□ 0.07
CCHCR1-228ENST00000509552 DHRS7BQ6IAN0 325 aaPredicted RBP15.48■□□□□ 0.07
CCHCR1-228ENST00000509552 GLYATL2Q8WU03 294 aa15.48■□□□□ 0.07
CCHCR1-228ENST00000509552 RSRP1Q9BUV0 290 aa15.48■□□□□ 0.07
CCHCR1-228ENST00000509552 PAPOLGQ9BWT3 736 aaKnown RBP15.48■□□□□ 0.07
CCHCR1-228ENST00000509552 SLC7A10Q9NS82 523 aa15.48■□□□□ 0.07
CCHCR1-228ENST00000509552 FAM212BQ9NTI7 297 aaPredicted RBP15.48■□□□□ 0.07
CCHCR1-228ENST00000509552 FAM86C1Q9NVL1 165 aa15.48■□□□□ 0.07
CCHCR1-228ENST00000509552 POMT1Q9Y6A1 747 aa15.48■□□□□ 0.07
CCHCR1-228ENST00000509552 FAM90A10PA6NDY2 464 aa15.47■□□□□ 0.07
CCHCR1-228ENST00000509552 FAM90A18PA6NE21 464 aa15.47■□□□□ 0.07
CCHCR1-228ENST00000509552 FAM90A16PA6NEW6 464 aa15.47■□□□□ 0.07
CCHCR1-228ENST00000509552 FAM90A20PA6NIJ5 464 aa15.47■□□□□ 0.07
CCHCR1-228ENST00000509552 FAM90A8PA6NJQ4 464 aa15.47■□□□□ 0.07
CCHCR1-228ENST00000509552 FAM90A7PA6NKC0 464 aa15.47■□□□□ 0.07
CCHCR1-228ENST00000509552 FAM90A22PA8MWA6 464 aa15.47■□□□□ 0.07
CCHCR1-228ENST00000509552 FAM90A12PA8MX19 464 aa15.47■□□□□ 0.07
CCHCR1-228ENST00000509552 FAM90A5PA8MXJ8 464 aa15.47■□□□□ 0.07
CCHCR1-228ENST00000509552 FAM90A23PA8MXZ1 464 aa15.47■□□□□ 0.07
CCHCR1-228ENST00000509552 GPR137BO60478 399 aa15.47■□□□□ 0.07
CCHCR1-228ENST00000509552 DIRAS3O95661 229 aa15.47■□□□□ 0.07
CCHCR1-228ENST00000509552 H2AFB1P0C5Y9 115 aa15.47■□□□□ 0.07
CCHCR1-228ENST00000509552 FAM90A15PP0C7V4 464 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms