RNA–Protein interactions for RNA: ENST00000509206.1

RNF4-211, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-211ENST00000509206 PIGLQ9Y2B2 252 aa2.95□□□□□ -1.94
RNF4-211ENST00000509206 MRPS28Q9Y2Q9 187 aaKnown RBP2.95□□□□□ -1.94
RNF4-211ENST00000509206 RHBDD3Q9Y3P4 386 aa2.95□□□□□ -1.94
RNF4-211ENST00000509206 LHFPL6Q9Y693 200 aa2.95□□□□□ -1.94
RNF4-211ENST00000509206 WSB1Q9Y6I7 421 aa2.95□□□□□ -1.94
RNF4-211ENST00000509206 VPS13DQ5THJ4 4388 aa2.95□□□□□ -1.94
RNF4-211ENST00000509206 SMIM23A6NLE4 172 aa2.94□□□□□ -1.94
RNF4-211ENST00000509206 HMGB1P1B2RPK0 211 aaPredicted RBP2.94□□□□□ -1.94
RNF4-211ENST00000509206 ZNF732B4DXR9 585 aa2.94□□□□□ -1.94
RNF4-211ENST00000509206 F5H697 171 aa2.94□□□□□ -1.94
RNF4-211ENST00000509206 I3L521 148 aa2.94□□□□□ -1.94
RNF4-211ENST00000509206 M0R2N4 97 aa2.94□□□□□ -1.94
RNF4-211ENST00000509206 SOCS2O14508 198 aa2.94□□□□□ -1.94
RNF4-211ENST00000509206 TRIAP1O43715 76 aa2.94□□□□□ -1.94
RNF4-211ENST00000509206 MPZL2O60487 215 aa2.94□□□□□ -1.94
RNF4-211ENST00000509206 MTRF1O75570 445 aaKnown RBP2.94□□□□□ -1.94
RNF4-211ENST00000509206 CDK2AP2O75956 126 aa2.94□□□□□ -1.94
RNF4-211ENST00000509206 ACTL6BO94805 426 aa2.94□□□□□ -1.94
RNF4-211ENST00000509206 SCAF4O95104 1147 aaKnown RBP2.94□□□□□ -1.94
RNF4-211ENST00000509206 NXPH2O95156 264 aa2.94□□□□□ -1.94
RNF4-211ENST00000509206 LYPD3O95274 346 aa2.94□□□□□ -1.94
RNF4-211ENST00000509206 RENP00797 406 aa2.94□□□□□ -1.94
RNF4-211ENST00000509206 IGKV1D-33P01593 117 aa2.94□□□□□ -1.94
RNF4-211ENST00000509206 IGKV1-33P01594 117 aa2.94□□□□□ -1.94
RNF4-211ENST00000509206 IGLV1-51P01701 117 aa2.94□□□□□ -1.94
RNF4-211ENST00000509206 IGHG4P01861 327 aa2.94□□□□□ -1.94
RNF4-211ENST00000509206 CD14P08571 375 aa2.94□□□□□ -1.94
RNF4-211ENST00000509206 PPIBP23284 216 aaKnown RBP2.94□□□□□ -1.94
RNF4-211ENST00000509206 IL12AP29459 219 aa2.94□□□□□ -1.94
RNF4-211ENST00000509206 PPIFP30405 207 aaKnown RBP2.94□□□□□ -1.94
RNF4-211ENST00000509206 RPL14P50914 215 aaKnown RBP2.94□□□□□ -1.94
RNF4-211ENST00000509206 GPM6AP51674 278 aa2.94□□□□□ -1.94
RNF4-211ENST00000509206 DLX6P56179 175 aa2.94□□□□□ -1.94
RNF4-211ENST00000509206 TCTAP57738 103 aa2.94□□□□□ -1.94
RNF4-211ENST00000509206 RPS7P62081 194 aaKnown RBP2.94□□□□□ -1.94
RNF4-211ENST00000509206 FAM3AP98173 230 aa2.94□□□□□ -1.94
RNF4-211ENST00000509206 RUNX1Q01196 453 aa2.94□□□□□ -1.94
RNF4-211ENST00000509206 ZNF45Q02386 682 aa2.94□□□□□ -1.94
RNF4-211ENST00000509206 MEF2CQ06413 473 aaPredicted RBP2.94□□□□□ -1.94
RNF4-211ENST00000509206 PRDX4Q13162 271 aa2.94□□□□□ -1.94
RNF4-211ENST00000509206 KRR1Q13601 381 aaKnown RBP2.94□□□□□ -1.94
RNF4-211ENST00000509206 DYRK1AQ13627 763 aa2.94□□□□□ -1.94
RNF4-211ENST00000509206 EIF2B1Q14232 305 aaKnown RBP2.94□□□□□ -1.94
RNF4-211ENST00000509206 DUSP7Q16829 419 aa2.94□□□□□ -1.94
RNF4-211ENST00000509206 CD300EQ496F6 205 aaPredicted RBP2.94□□□□□ -1.94
RNF4-211ENST00000509206 MESTQ5EB52 335 aa2.94□□□□□ -1.94
RNF4-211ENST00000509206 TPTE2P1Q5T6R2 138 aa2.94□□□□□ -1.94
RNF4-211ENST00000509206 ASPHD1Q5U4P2 390 aa2.94□□□□□ -1.94
RNF4-211ENST00000509206 LCN12Q6JVE5 192 aa2.94□□□□□ -1.94
RNF4-211ENST00000509206 SLC18B1Q6NT16 456 aa2.94□□□□□ -1.94
RNF4-211ENST00000509206 HAGHLQ6PII5 290 aaPredicted RBP2.94□□□□□ -1.94
RNF4-211ENST00000509206 SMARCD3Q6STE5 483 aa2.94□□□□□ -1.94
RNF4-211ENST00000509206 LYG2Q86SG7 212 aa2.94□□□□□ -1.94
RNF4-211ENST00000509206 MOB3BQ86TA1 216 aa2.94□□□□□ -1.94
RNF4-211ENST00000509206 SLC15A3Q8IY34 581 aa2.94□□□□□ -1.94
RNF4-211ENST00000509206 ZDHHC23Q8IYP9 409 aa2.94□□□□□ -1.94
RNF4-211ENST00000509206 ADGRG5Q8IZF4 528 aa2.94□□□□□ -1.94
RNF4-211ENST00000509206 LINC00471Q8N535 108 aa2.94□□□□□ -1.94
RNF4-211ENST00000509206 ZNF491Q8N8L2 437 aa2.94□□□□□ -1.94
RNF4-211ENST00000509206 OR56B4Q8NH76 319 aa2.94□□□□□ -1.94
RNF4-211ENST00000509206 C2CD4CQ8TF44 421 aa2.94□□□□□ -1.94
RNF4-211ENST00000509206 RASSF5Q8WWW0 418 aa2.94□□□□□ -1.94
RNF4-211ENST00000509206 TOMM40LQ969M1 308 aa2.94□□□□□ -1.94
RNF4-211ENST00000509206 VPS33AQ96AX1 596 aa2.94□□□□□ -1.94
RNF4-211ENST00000509206 REEP6Q96HR9 211 aa2.94□□□□□ -1.94
RNF4-211ENST00000509206 KCTD7Q96MP8 289 aa2.94□□□□□ -1.94
RNF4-211ENST00000509206 NRIP2Q9BQI9 281 aa2.94□□□□□ -1.94
RNF4-211ENST00000509206 PRSS27Q9BQR3 290 aa2.94□□□□□ -1.94
RNF4-211ENST00000509206 ZNF426Q9BUY5 554 aa2.94□□□□□ -1.94
RNF4-211ENST00000509206 DGCR6LQ9BY27 220 aa2.94□□□□□ -1.94
RNF4-211ENST00000509206 SRD5A3Q9H8P0 318 aa2.94□□□□□ -1.94
RNF4-211ENST00000509206 NMNAT1Q9HAN9 279 aaPredicted RBP2.94□□□□□ -1.94
RNF4-211ENST00000509206 ZNF355PQ9NSJ1 428 aa2.94□□□□□ -1.94
RNF4-211ENST00000509206 ZDHHC18Q9NUE0 388 aa2.94□□□□□ -1.94
RNF4-211ENST00000509206 AIG1Q9NVV5 245 aa2.94□□□□□ -1.94
RNF4-211ENST00000509206 FBXL17Q9UF56 701 aa2.94□□□□□ -1.94
RNF4-211ENST00000509206 RIMS3Q9UJD0 308 aa2.94□□□□□ -1.94
RNF4-211ENST00000509206 ZNF222Q9UK12 451 aa2.94□□□□□ -1.94
RNF4-211ENST00000509206 COPS3Q9UNS2 423 aa2.94□□□□□ -1.94
RNF4-211ENST00000509206 SLC22A13Q9Y226 551 aa2.94□□□□□ -1.94
RNF4-211ENST00000509206 SH3GLB1Q9Y371 365 aa2.94□□□□□ -1.94
RNF4-211ENST00000509206 ADAM18Q9Y3Q7 739 aa2.94□□□□□ -1.94
RNF4-211ENST00000509206 AMMECR1Q9Y4X0 333 aaPredicted RBP2.94□□□□□ -1.94
RNF4-211ENST00000509206 TRGV10A0A0A0MS01 117 aa2.93□□□□□ -1.94
RNF4-211ENST00000509206 FAM172BPA6NC97 362 aa2.93□□□□□ -1.94
RNF4-211ENST00000509206 HMX3A6NHT5 357 aa2.93□□□□□ -1.94
RNF4-211ENST00000509206 OR11H12B2RN74 326 aa2.93□□□□□ -1.94
RNF4-211ENST00000509206 EPM2AB3EWF7 344 aa2.93□□□□□ -1.94
RNF4-211ENST00000509206 BUB1B-PAK6H3BSN5 160 aa2.93□□□□□ -1.94
RNF4-211ENST00000509206 K7N7A8 449 aa2.93□□□□□ -1.94
RNF4-211ENST00000509206 DLGAP1O14490 977 aa2.93□□□□□ -1.94
RNF4-211ENST00000509206 ARPC1BO15143 372 aaKnown RBP2.93□□□□□ -1.94
RNF4-211ENST00000509206 APOC1P02654 83 aa2.93□□□□□ -1.94
RNF4-211ENST00000509206 HSPB1P04792 205 aaKnown RBP2.93□□□□□ -1.94
RNF4-211ENST00000509206 ABHD2P08910 425 aa2.93□□□□□ -1.94
RNF4-211ENST00000509206 TSPAN19P0C672 248 aa2.93□□□□□ -1.94
RNF4-211ENST00000509206 NFYBP25208 207 aa2.93□□□□□ -1.94
RNF4-211ENST00000509206 PSMB8P28062 276 aa2.93□□□□□ -1.94
RNF4-211ENST00000509206 GCAP28676 217 aa2.93□□□□□ -1.94
RNF4-211ENST00000509206 HSD11B1P28845 292 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms