RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 ZNF329Q86UD4 541 aa12.7□□□□□ -0.38
CXCL1-202ENST00000509101 OR52N4Q8NGI2 321 aa12.7□□□□□ -0.38
CXCL1-202ENST00000509101 OR14K1Q8NGZ2 314 aa12.7□□□□□ -0.38
CXCL1-202ENST00000509101 TFAP2CQ92754 450 aa12.7□□□□□ -0.38
CXCL1-202ENST00000509101 THTPAQ9BU02 230 aa12.7□□□□□ -0.38
CXCL1-202ENST00000509101 MOB1AQ9H8S9 216 aa12.7□□□□□ -0.38
CXCL1-202ENST00000509101 MTCH1Q9NZJ7 389 aa12.7□□□□□ -0.38
CXCL1-202ENST00000509101 DNAJB9Q9UBS3 223 aa12.7□□□□□ -0.38
CXCL1-202ENST00000509101 NUDT19A8MXV4 375 aa12.69□□□□□ -0.38
CXCL1-202ENST00000509101 SRSF10O75494 262 aaKnown RBP12.69□□□□□ -0.38
CXCL1-202ENST00000509101 HAND1O96004 215 aa12.69□□□□□ -0.38
CXCL1-202ENST00000509101 HMGN1P05114 100 aa12.69□□□□□ -0.38
CXCL1-202ENST00000509101 PEX2P28328 305 aa12.69□□□□□ -0.38
CXCL1-202ENST00000509101 DGCR2P98153 550 aa12.69□□□□□ -0.38
CXCL1-202ENST00000509101 SNAPC1Q16533 368 aa12.69□□□□□ -0.38
CXCL1-202ENST00000509101 FAM98BQ52LJ0 330 aaKnown RBP12.69□□□□□ -0.38
CXCL1-202ENST00000509101 UNQ9370/PRO34162Q6UXP9 181 aa12.69□□□□□ -0.38
CXCL1-202ENST00000509101 DHFR2Q86XF0 187 aa12.69□□□□□ -0.38
CXCL1-202ENST00000509101 ABHD12Q8N2K0 398 aa12.69□□□□□ -0.38
CXCL1-202ENST00000509101 ASB17Q8WXJ9 295 aa12.69□□□□□ -0.38
CXCL1-202ENST00000509101 EMG1Q92979 244 aaKnown RBP12.69□□□□□ -0.38
CXCL1-202ENST00000509101 CCDC124Q96CT7 223 aaKnown RBP12.69□□□□□ -0.38
CXCL1-202ENST00000509101 PCDHGB5Q9Y5G0 923 aa12.69□□□□□ -0.38
CXCL1-202ENST00000509101 EPPK1P58107 5090 aaKnown RBP12.68□□□□□ -0.38
CXCL1-202ENST00000509101 SACSQ9NZJ4 4579 aa12.68□□□□□ -0.38
CXCL1-202ENST00000509101 IGKV1-27A0A075B6S5 117 aa12.68□□□□□ -0.38
CXCL1-202ENST00000509101 A0A1B0GTI1 187 aa12.68□□□□□ -0.38
CXCL1-202ENST00000509101 ARRDC5A6NEK1 342 aa12.68□□□□□ -0.38
CXCL1-202ENST00000509101 CCDC182A6NF36 153 aa12.68□□□□□ -0.38
CXCL1-202ENST00000509101 BDH1Q02338 343 aa12.68□□□□□ -0.38
CXCL1-202ENST00000509101 SLX4IPQ5VYV7 408 aa12.68□□□□□ -0.38
CXCL1-202ENST00000509101 OR2W3Q7Z3T1 314 aa12.68□□□□□ -0.38
CXCL1-202ENST00000509101 KLHL30-AS1Q8NEE0 82 aa12.68□□□□□ -0.38
CXCL1-202ENST00000509101 ZNF596Q8TC21 504 aa12.68□□□□□ -0.38
CXCL1-202ENST00000509101 PLEKHA1Q9HB21 404 aa12.68□□□□□ -0.38
CXCL1-202ENST00000509101 PAPOLBQ9NRJ5 636 aaKnown RBP12.68□□□□□ -0.38
CXCL1-202ENST00000509101 OR52A1Q9UKL2 312 aa12.68□□□□□ -0.38
CXCL1-202ENST00000509101 HHLA2Q9UM44 414 aa12.68□□□□□ -0.38
CXCL1-202ENST00000509101 SLC7A11Q9UPY5 501 aa12.68□□□□□ -0.38
CXCL1-202ENST00000509101 TMEM14AQ9Y6G1 99 aa12.68□□□□□ -0.38
CXCL1-202ENST00000509101 LEUTXA8MZ59 168 aa12.67□□□□□ -0.38
CXCL1-202ENST00000509101 C3orf84H3BNL1 204 aa12.67□□□□□ -0.38
CXCL1-202ENST00000509101 H3BSH0 61 aa12.67□□□□□ -0.38
CXCL1-202ENST00000509101 MAGEB4O15481 346 aaPredicted RBP12.67□□□□□ -0.38
CXCL1-202ENST00000509101 GYG2O15488 501 aa12.67□□□□□ -0.38
CXCL1-202ENST00000509101 PSPNO60542 156 aa12.67□□□□□ -0.38
CXCL1-202ENST00000509101 CDK2P24941 298 aa12.67□□□□□ -0.38
CXCL1-202ENST00000509101 DUSP1P28562 367 aa12.67□□□□□ -0.38
CXCL1-202ENST00000509101 SNU13P55769 128 aaKnown RBP12.67□□□□□ -0.38
CXCL1-202ENST00000509101 CDK5Q00535 292 aa12.67□□□□□ -0.38
CXCL1-202ENST00000509101 ZNF91Q05481 1191 aa12.67□□□□□ -0.38
CXCL1-202ENST00000509101 NKAPLQ5M9Q1 402 aa12.67□□□□□ -0.38
CXCL1-202ENST00000509101 TMEM236Q5W0B7 351 aa12.67□□□□□ -0.38
CXCL1-202ENST00000509101 SLC25A26Q70HW3 274 aa12.67□□□□□ -0.38
CXCL1-202ENST00000509101 TMEM179BQ7Z7N9 219 aa12.67□□□□□ -0.38
CXCL1-202ENST00000509101 EGFL6Q8IUX8 553 aa12.67□□□□□ -0.38
CXCL1-202ENST00000509101 ELMOD2Q8IZ81 293 aa12.67□□□□□ -0.38
CXCL1-202ENST00000509101 ASB9Q96DX5 294 aa12.67□□□□□ -0.38
CXCL1-202ENST00000509101 NOL4LQ96MY1 436 aaPredicted RBP12.67□□□□□ -0.38
CXCL1-202ENST00000509101 DUX3Q96PT4 197 aa12.67□□□□□ -0.38
CXCL1-202ENST00000509101 APOL4Q9BPW4 351 aa12.67□□□□□ -0.38
CXCL1-202ENST00000509101 ZNF286AQ9HBT8 521 aa12.67□□□□□ -0.38
CXCL1-202ENST00000509101 ZMAT5Q9UDW3 170 aaKnown RBP12.67□□□□□ -0.38
CXCL1-202ENST00000509101 UBE2J1Q9Y385 318 aaPredicted RBP12.67□□□□□ -0.38
CXCL1-202ENST00000509101 MOB4Q9Y3A3 225 aa12.67□□□□□ -0.38
CXCL1-202ENST00000509101 R4GMQ9 66 aa12.67□□□□□ -0.38
CXCL1-202ENST00000509101 HSPE1-MOB4S4R3N1 261 aa12.67□□□□□ -0.38
CXCL1-202ENST00000509101 HUWE1Q7Z6Z7 4374 aaKnown RBP12.67□□□□□ -0.38
CXCL1-202ENST00000509101 TENM2Q9NT68 2774 aa12.66□□□□□ -0.38
CXCL1-202ENST00000509101 DHRS7CA6NNS2 312 aa12.66□□□□□ -0.38
CXCL1-202ENST00000509101 M0QZK8 103 aa12.66□□□□□ -0.38
CXCL1-202ENST00000509101 MGST3O14880 152 aa12.66□□□□□ -0.38
CXCL1-202ENST00000509101 CST1P01037 141 aa12.66□□□□□ -0.38
CXCL1-202ENST00000509101 IGLV1-47P01700 117 aa12.66□□□□□ -0.38
CXCL1-202ENST00000509101 OSMP13725 252 aa12.66□□□□□ -0.38
CXCL1-202ENST00000509101 GDNFP39905 211 aa12.66□□□□□ -0.38
CXCL1-202ENST00000509101 MYCNOSP40205 109 aa12.66□□□□□ -0.38
CXCL1-202ENST00000509101 OR3A1P47881 315 aa12.66□□□□□ -0.38
CXCL1-202ENST00000509101 OR3A4PP47883 348 aa12.66□□□□□ -0.38
CXCL1-202ENST00000509101 P2RX3P56373 397 aa12.66□□□□□ -0.38
CXCL1-202ENST00000509101 RAB25P57735 213 aa12.66□□□□□ -0.38
CXCL1-202ENST00000509101 BNIP1Q12981 228 aa12.66□□□□□ -0.38
CXCL1-202ENST00000509101 GK3PQ14409 553 aa12.66□□□□□ -0.38
CXCL1-202ENST00000509101 UBE2V2Q15819 145 aa12.66□□□□□ -0.38
CXCL1-202ENST00000509101 ODF4Q2M2E3 257 aa12.66□□□□□ -0.38
CXCL1-202ENST00000509101 TPTE2P1Q5T6R2 138 aa12.66□□□□□ -0.38
CXCL1-202ENST00000509101 OR52W1Q6IF63 320 aa12.66□□□□□ -0.38
CXCL1-202ENST00000509101 ZNF322Q6U7Q0 402 aaPredicted RBP12.66□□□□□ -0.38
CXCL1-202ENST00000509101 RTN4RL2Q86UN3 420 aa12.66□□□□□ -0.38
CXCL1-202ENST00000509101 PRR25Q96S07 402 aa12.66□□□□□ -0.38
CXCL1-202ENST00000509101 CNN2Q99439 309 aaKnown RBP12.66□□□□□ -0.38
CXCL1-202ENST00000509101 P2RX4Q99571 388 aa12.66□□□□□ -0.38
CXCL1-202ENST00000509101 ASCL2Q99929 193 aa12.66□□□□□ -0.38
CXCL1-202ENST00000509101 GAL3ST2Q9H3Q3 398 aa12.66□□□□□ -0.38
CXCL1-202ENST00000509101 RBFOX1Q9NWB1 397 aaKnown RBP12.66□□□□□ -0.38
CXCL1-202ENST00000509101 BIRC6Q9NR09 4857 aa12.65□□□□□ -0.38
CXCL1-202ENST00000509101 SIRPB1O00241 398 aa12.65□□□□□ -0.38
CXCL1-202ENST00000509101 CALCBP10092 127 aa12.65□□□□□ -0.38
CXCL1-202ENST00000509101 RAP2AP10114 183 aa12.65□□□□□ -0.38
CXCL1-202ENST00000509101 CEACAM3P40198 252 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms