RNA–Protein interactions for RNA: ENST00000508756.2

CHD1-205, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-205ENST00000508756 TCEAL3Q969E4 200 aa3.44□□□□□ -1.86
CHD1-205ENST00000508756 MRAP2Q96G30 205 aa3.44□□□□□ -1.86
CHD1-205ENST00000508756 METTL26Q96S19 204 aa3.44□□□□□ -1.86
CHD1-205ENST00000508756 TEAD3Q99594 435 aa3.44□□□□□ -1.86
CHD1-205ENST00000508756 GPR22Q99680 433 aa3.44□□□□□ -1.86
CHD1-205ENST00000508756 TMED9Q9BVK6 235 aa3.44□□□□□ -1.86
CHD1-205ENST00000508756 SHCBP1LQ9BZQ2 653 aa3.44□□□□□ -1.86
CHD1-205ENST00000508756 HEBP1Q9NRV9 189 aa3.44□□□□□ -1.86
CHD1-205ENST00000508756 TFR2Q9UP52 801 aa3.44□□□□□ -1.86
CHD1-205ENST00000508756 HIVEP2P31629 2446 aa3.44□□□□□ -1.86
CHD1-205ENST00000508756 RAD50Q92878 1312 aa3.44□□□□□ -1.86
CHD1-205ENST00000508756 TRAV19A0A0A6YYK7 116 aa3.43□□□□□ -1.86
CHD1-205ENST00000508756 M0R1X1 148 aa3.43□□□□□ -1.86
CHD1-205ENST00000508756 DNASE2O00115 360 aaPredicted RBP3.43□□□□□ -1.86
CHD1-205ENST00000508756 FGF16O43320 207 aa3.43□□□□□ -1.86
CHD1-205ENST00000508756 SEMA3DO95025 777 aa3.43□□□□□ -1.86
CHD1-205ENST00000508756 PSMG1O95456 288 aa3.43□□□□□ -1.86
CHD1-205ENST00000508756 RLN2P04090 185 aa3.43□□□□□ -1.86
CHD1-205ENST00000508756 IGKV4-1P06312 121 aa3.43□□□□□ -1.86
CHD1-205ENST00000508756 MMP7P09237 267 aaPredicted RBP3.43□□□□□ -1.86
CHD1-205ENST00000508756 COX5BP10606 129 aa3.43□□□□□ -1.86
CHD1-205ENST00000508756 CRADDP78560 199 aa3.43□□□□□ -1.86
CHD1-205ENST00000508756 CDK5Q00535 292 aa3.43□□□□□ -1.86
CHD1-205ENST00000508756 LAMTOR4Q0VGL1 99 aa3.43□□□□□ -1.86
CHD1-205ENST00000508756 CEACAM16Q2WEN9 425 aa3.43□□□□□ -1.86
CHD1-205ENST00000508756 CDNFQ49AH0 187 aa3.43□□□□□ -1.86
CHD1-205ENST00000508756 HHATQ5VTY9 493 aa3.43□□□□□ -1.86
CHD1-205ENST00000508756 MED27Q6P2C8 311 aa3.43□□□□□ -1.86
CHD1-205ENST00000508756 MRPL52Q86TS9 123 aaKnown RBP3.43□□□□□ -1.86
CHD1-205ENST00000508756 CALHM3Q86XJ0 350 aa3.43□□□□□ -1.86
CHD1-205ENST00000508756 WDFY1Q8IWB7 410 aa3.43□□□□□ -1.86
CHD1-205ENST00000508756 CYP4Z2PQ8N1L4 340 aa3.43□□□□□ -1.86
CHD1-205ENST00000508756 RIBC1Q8N443 379 aaPredicted RBP3.43□□□□□ -1.86
CHD1-205ENST00000508756 C2orf73Q8N5S3 287 aaPredicted RBP3.43□□□□□ -1.86
CHD1-205ENST00000508756 OR5AK3PQ8NH89 298 aa3.43□□□□□ -1.86
CHD1-205ENST00000508756 BLNKQ8WV28 456 aa3.43□□□□□ -1.86
CHD1-205ENST00000508756 C18orf15Q96N68 181 aa3.43□□□□□ -1.86
CHD1-205ENST00000508756 TAPBPLQ9BX59 468 aa3.43□□□□□ -1.86
CHD1-205ENST00000508756 OR52D1Q9H346 318 aa3.43□□□□□ -1.86
CHD1-205ENST00000508756 FBXO6Q9NRD1 293 aaPredicted RBP3.43□□□□□ -1.86
CHD1-205ENST00000508756 PLEKHJ1Q9NW61 149 aa3.43□□□□□ -1.86
CHD1-205ENST00000508756 SLC7A11Q9UPY5 501 aa3.43□□□□□ -1.86
CHD1-205ENST00000508756 USH1CQ9Y6N9 552 aa3.43□□□□□ -1.86
CHD1-205ENST00000508756 C5orf63A6NC05 138 aa3.42□□□□□ -1.86
CHD1-205ENST00000508756 C9J4A7 227 aa3.42□□□□□ -1.86
CHD1-205ENST00000508756 KRBOX1C9JBD0 128 aa3.42□□□□□ -1.86
CHD1-205ENST00000508756 F5H5T6 163 aa3.42□□□□□ -1.86
CHD1-205ENST00000508756 SOCS1O15524 211 aa3.42□□□□□ -1.86
CHD1-205ENST00000508756 FABP7O15540 132 aa3.42□□□□□ -1.86
CHD1-205ENST00000508756 DEXIO95424 95 aa3.42□□□□□ -1.86
CHD1-205ENST00000508756 ASS1P00966 412 aaKnown RBP3.42□□□□□ -1.86
CHD1-205ENST00000508756 ORM1P02763 201 aa3.42□□□□□ -1.86
CHD1-205ENST00000508756 HTR1DP28221 377 aa3.42□□□□□ -1.86
CHD1-205ENST00000508756 GFERP55789 205 aa3.42□□□□□ -1.86
CHD1-205ENST00000508756 ZNF616Q08AN1 781 aa3.42□□□□□ -1.86
CHD1-205ENST00000508756 CASP12Q6UXS9 341 aa3.42□□□□□ -1.86
CHD1-205ENST00000508756 LINC00304Q8N9R0 145 aa3.42□□□□□ -1.86
CHD1-205ENST00000508756 OR51Q1Q8NH59 317 aa3.42□□□□□ -1.86
CHD1-205ENST00000508756 PTX4Q96A99 478 aa3.42□□□□□ -1.86
CHD1-205ENST00000508756 YIPF6Q96EC8 236 aa3.42□□□□□ -1.86
CHD1-205ENST00000508756 FMC1Q96HJ9 113 aa3.42□□□□□ -1.86
CHD1-205ENST00000508756 OR4K3Q96R72 315 aa3.42□□□□□ -1.86
CHD1-205ENST00000508756 HSD17B10Q99714 261 aaKnown RBP3.42□□□□□ -1.86
CHD1-205ENST00000508756 SPZ1Q9BXG8 430 aa3.42□□□□□ -1.86
CHD1-205ENST00000508756 ZNF717Q9BY31 904 aaPredicted RBP3.42□□□□□ -1.86
CHD1-205ENST00000508756 DHX35Q9H5Z1 703 aaKnown RBP3.42□□□□□ -1.86
CHD1-205ENST00000508756 FARSAQ9Y285 508 aaKnown RBP3.42□□□□□ -1.86
CHD1-205ENST00000508756 ENPP4Q9Y6X5 453 aa3.42□□□□□ -1.86
CHD1-205ENST00000508756 IGHV1OR15-9A0A0B4J2B8 117 aa3.41□□□□□ -1.86
CHD1-205ENST00000508756 A0A1B0GTI1 187 aa3.41□□□□□ -1.86
CHD1-205ENST00000508756 RPA3P35244 121 aaPredicted RBP3.41□□□□□ -1.86
CHD1-205ENST00000508756 APLNRP35414 380 aa3.41□□□□□ -1.86
CHD1-205ENST00000508756 RAB8AP61006 207 aa3.41□□□□□ -1.86
CHD1-205ENST00000508756 MRPS15P82914 257 aaKnown RBP3.41□□□□□ -1.86
CHD1-205ENST00000508756 TMEM249Q2WGJ8 235 aa3.41□□□□□ -1.86
CHD1-205ENST00000508756 COQ5Q5HYK3 327 aa3.41□□□□□ -1.86
CHD1-205ENST00000508756 SDHAF4Q5VUM1 108 aa3.41□□□□□ -1.86
CHD1-205ENST00000508756 CLEC19AQ6UXS0 136 aa3.41□□□□□ -1.86
CHD1-205ENST00000508756 PRNTQ86SH4 94 aa3.41□□□□□ -1.86
CHD1-205ENST00000508756 DCAKDQ8WVC6 231 aa3.41□□□□□ -1.86
CHD1-205ENST00000508756 RTN4IP1Q8WWV3 396 aaPredicted RBP3.41□□□□□ -1.86
CHD1-205ENST00000508756 CDX2Q99626 313 aaPredicted RBP3.41□□□□□ -1.86
CHD1-205ENST00000508756 POMKQ9H5K3 350 aa3.41□□□□□ -1.86
CHD1-205ENST00000508756 DNAJC27Q9NZQ0 273 aa3.41□□□□□ -1.86
CHD1-205ENST00000508756 USP42Q9H9J4 1324 aaKnown RBP3.41□□□□□ -1.86
CHD1-205ENST00000508756 POLR3AO14802 1390 aaPredicted RBP3.4□□□□□ -1.86
CHD1-205ENST00000508756 H3BP45 60 aa3.4□□□□□ -1.87
CHD1-205ENST00000508756 MANBAO00462 879 aa3.4□□□□□ -1.87
CHD1-205ENST00000508756 MYL12BO14950 172 aa3.4□□□□□ -1.87
CHD1-205ENST00000508756 ZW10O43264 779 aa3.4□□□□□ -1.87
CHD1-205ENST00000508756 CD74P04233 296 aa3.4□□□□□ -1.87
CHD1-205ENST00000508756 ZNF35P13682 527 aa3.4□□□□□ -1.87
CHD1-205ENST00000508756 TSPOP30536 169 aa3.4□□□□□ -1.87
CHD1-205ENST00000508756 GTF2H1P32780 548 aa3.4□□□□□ -1.87
CHD1-205ENST00000508756 MAGEA2P43356 314 aa3.4□□□□□ -1.87
CHD1-205ENST00000508756 IFITM3Q01628 133 aa3.4□□□□□ -1.87
CHD1-205ENST00000508756 AVPI1Q5T686 147 aa3.4□□□□□ -1.87
CHD1-205ENST00000508756 UNQ9165/PRO28630Q6UXU0 137 aa3.4□□□□□ -1.87
CHD1-205ENST00000508756 Q6ZSR6 202 aa3.4□□□□□ -1.87
CHD1-205ENST00000508756 TPGS1Q6ZTW0 290 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms