RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 WDR25Q64LD2 544 aaPredicted RBP3.74□□□□□ -1.81
NUP54-206ENST00000508465 ZFP1Q6P2D0 407 aa3.74□□□□□ -1.81
NUP54-206ENST00000508465 DEGS2Q6QHC5 323 aa3.74□□□□□ -1.81
NUP54-206ENST00000508465 ZNF841Q6ZN19 808 aa3.74□□□□□ -1.81
NUP54-206ENST00000508465 ZBTB49Q6ZSB9 765 aa3.74□□□□□ -1.81
NUP54-206ENST00000508465 ZNF329Q86UD4 541 aa3.74□□□□□ -1.81
NUP54-206ENST00000508465 LHFPL3Q86UP9 236 aa3.74□□□□□ -1.81
NUP54-206ENST00000508465 ANGPTL5Q86XS5 388 aa3.74□□□□□ -1.81
NUP54-206ENST00000508465 GID4Q8IVV7 300 aa3.74□□□□□ -1.81
NUP54-206ENST00000508465 PDZD9Q8IXQ8 264 aa3.74□□□□□ -1.81
NUP54-206ENST00000508465 ZNF679Q8IYX0 411 aa3.74□□□□□ -1.81
NUP54-206ENST00000508465 C1orf87Q8N0U7 546 aa3.74□□□□□ -1.81
NUP54-206ENST00000508465 GCSAMQ8N6F7 178 aa3.74□□□□□ -1.81
NUP54-206ENST00000508465 YIPF7Q8N8F6 280 aa3.74□□□□□ -1.81
NUP54-206ENST00000508465 SPERTQ8NA61 448 aa3.74□□□□□ -1.81
NUP54-206ENST00000508465 SCCPDHQ8NBX0 429 aa3.74□□□□□ -1.81
NUP54-206ENST00000508465 CSNK2A3Q8NEV1 391 aa3.74□□□□□ -1.81
NUP54-206ENST00000508465 OR8B3Q8NGG8 313 aa3.74□□□□□ -1.81
NUP54-206ENST00000508465 NANPQ8TBE9 248 aa3.74□□□□□ -1.81
NUP54-206ENST00000508465 ABHD5Q8WTS1 349 aa3.74□□□□□ -1.81
NUP54-206ENST00000508465 RAB40AQ8WXH6 277 aa3.74□□□□□ -1.81
NUP54-206ENST00000508465 ASB17Q8WXJ9 295 aa3.74□□□□□ -1.81
NUP54-206ENST00000508465 TAF15Q92804 592 aaKnown RBP eCLIP3.74□□□□□ -1.81
NUP54-206ENST00000508465 RNFT2Q96EX2 444 aa3.74□□□□□ -1.81
NUP54-206ENST00000508465 ZNF488Q96MN9 340 aa3.74□□□□□ -1.81
NUP54-206ENST00000508465 DUX5Q96PT3 197 aa3.74□□□□□ -1.81
NUP54-206ENST00000508465 HIST1H2AAQ96QV6 131 aa3.74□□□□□ -1.81
NUP54-206ENST00000508465 OR8B2Q96RD0 313 aa3.74□□□□□ -1.81
NUP54-206ENST00000508465 MICU1Q9BPX6 476 aa3.74□□□□□ -1.81
NUP54-206ENST00000508465 GABARAPL3Q9BY60 117 aa3.74□□□□□ -1.81
NUP54-206ENST00000508465 MROQ9BYG7 248 aa3.74□□□□□ -1.81
NUP54-206ENST00000508465 SLC22A4Q9H015 551 aa3.74□□□□□ -1.81
NUP54-206ENST00000508465 AMBNQ9NP70 447 aa3.74□□□□□ -1.81
NUP54-206ENST00000508465 GPR173Q9NS66 373 aa3.74□□□□□ -1.81
NUP54-206ENST00000508465 CLN6Q9NWW5 311 aa3.74□□□□□ -1.81
NUP54-206ENST00000508465 FAM206AQ9NX38 181 aa3.74□□□□□ -1.81
NUP54-206ENST00000508465 IMPAD1Q9NX62 359 aa3.74□□□□□ -1.81
NUP54-206ENST00000508465 CTSZQ9UBR2 303 aa3.74□□□□□ -1.81
NUP54-206ENST00000508465 DNAJB11Q9UBS4 358 aa3.74□□□□□ -1.81
NUP54-206ENST00000508465 OR5V1Q9UGF6 321 aa3.74□□□□□ -1.81
NUP54-206ENST00000508465 WARS2Q9UGM6 360 aaKnown RBP3.74□□□□□ -1.81
NUP54-206ENST00000508465 STEAP1Q9UHE8 339 aa3.74□□□□□ -1.81
NUP54-206ENST00000508465 OR52A1Q9UKL2 312 aa3.74□□□□□ -1.81
NUP54-206ENST00000508465 HSF4Q9ULV5 492 aa3.74□□□□□ -1.81
NUP54-206ENST00000508465 PIGLQ9Y2B2 252 aa3.74□□□□□ -1.81
NUP54-206ENST00000508465 NOP16Q9Y3C1 178 aaKnown RBP3.74□□□□□ -1.81
NUP54-206ENST00000508465 ORC6Q9Y5N6 252 aa3.74□□□□□ -1.81
NUP54-206ENST00000508465 INSIG2Q9Y5U4 225 aa3.74□□□□□ -1.81
NUP54-206ENST00000508465 AUP1Q9Y679 476 aa3.74□□□□□ -1.81
NUP54-206ENST00000508465 TMEM14AQ9Y6G1 99 aa3.74□□□□□ -1.81
NUP54-206ENST00000508465 TENM1Q9UKZ4 2725 aa3.74□□□□□ -1.81
NUP54-206ENST00000508465 TRAV38-1A0A0B4J264 116 aa3.73□□□□□ -1.81
NUP54-206ENST00000508465 IGHV2-70DA0A0C4DH43 119 aa3.73□□□□□ -1.81
NUP54-206ENST00000508465 A0A0U1RQV5 110 aa3.73□□□□□ -1.81
NUP54-206ENST00000508465 KIR2DS1A0A191URI9 304 aa3.73□□□□□ -1.81
NUP54-206ENST00000508465 FAM230AA0A1W2PPH8 454 aa3.73□□□□□ -1.81
NUP54-206ENST00000508465 A0A1W2PRD5 423 aa3.73□□□□□ -1.81
NUP54-206ENST00000508465 A0A1W2PRF3 423 aa3.73□□□□□ -1.81
NUP54-206ENST00000508465 A0A1W2PRM7 423 aa3.73□□□□□ -1.81
NUP54-206ENST00000508465 DAPL1A0PJW8 107 aa3.73□□□□□ -1.81
NUP54-206ENST00000508465 OOEPA6NGQ2 149 aa3.73□□□□□ -1.81
NUP54-206ENST00000508465 METTL15A6NJ78 407 aa3.73□□□□□ -1.81
NUP54-206ENST00000508465 ACOD1A6NK06 481 aa3.73□□□□□ -1.81
NUP54-206ENST00000508465 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.73□□□□□ -1.81
NUP54-206ENST00000508465 J3QLI3 93 aa3.73□□□□□ -1.81
NUP54-206ENST00000508465 J3QLW9 94 aa3.73□□□□□ -1.81
NUP54-206ENST00000508465 DVL1O14640 695 aa3.73□□□□□ -1.81
NUP54-206ENST00000508465 TCF21O43680 179 aa3.73□□□□□ -1.81
NUP54-206ENST00000508465 SYNGR1O43759 233 aa3.73□□□□□ -1.81
NUP54-206ENST00000508465 ZNF254O75437 659 aa3.73□□□□□ -1.81
NUP54-206ENST00000508465 SRSF10O75494 262 aaKnown RBP3.73□□□□□ -1.81
NUP54-206ENST00000508465 PTBP3O95758 552 aaKnown RBP3.73□□□□□ -1.81
NUP54-206ENST00000508465 CST4P01036 141 aa3.73□□□□□ -1.81
NUP54-206ENST00000508465 NRASP01111 189 aa3.73□□□□□ -1.81
NUP54-206ENST00000508465 SFTPBP07988 381 aa3.73□□□□□ -1.81
NUP54-206ENST00000508465 OR2T7P0C7T2 308 aa3.73□□□□□ -1.81
NUP54-206ENST00000508465 IGHV4-38-2P0DP08 117 aa3.73□□□□□ -1.81
NUP54-206ENST00000508465 CALCBP10092 127 aa3.73□□□□□ -1.81
NUP54-206ENST00000508465 ZNF12P17014 697 aa3.73□□□□□ -1.81
NUP54-206ENST00000508465 ZNF19P17023 458 aa3.73□□□□□ -1.81
NUP54-206ENST00000508465 PCMT1P22061 227 aa3.73□□□□□ -1.81
NUP54-206ENST00000508465 CFL1P23528 166 aaKnown RBP3.73□□□□□ -1.81
NUP54-206ENST00000508465 ARL3P36405 182 aa3.73□□□□□ -1.81
NUP54-206ENST00000508465 GABRA2P47869 451 aa3.73□□□□□ -1.81
NUP54-206ENST00000508465 MTNR1AP48039 350 aa3.73□□□□□ -1.81
NUP54-206ENST00000508465 ALDH3A2P51648 485 aa3.73□□□□□ -1.81
NUP54-206ENST00000508465 OR12D2P58182 307 aa3.73□□□□□ -1.81
NUP54-206ENST00000508465 CDC42P60953 191 aa3.73□□□□□ -1.81
NUP54-206ENST00000508465 FGF12P61328 243 aa3.73□□□□□ -1.81
NUP54-206ENST00000508465 SNRPGP62308 76 aaKnown RBP3.73□□□□□ -1.81
NUP54-206ENST00000508465 ARF6P62330 175 aa3.73□□□□□ -1.81
NUP54-206ENST00000508465 RPP30P78346 268 aaKnown RBP3.73□□□□□ -1.81
NUP54-206ENST00000508465 IL5RAQ01344 420 aa3.73□□□□□ -1.81
NUP54-206ENST00000508465 ZNF85Q03923 595 aa3.73□□□□□ -1.81
NUP54-206ENST00000508465 MZT1Q08AG7 82 aa3.73□□□□□ -1.81
NUP54-206ENST00000508465 RIPPLY1Q0D2K3 151 aa3.73□□□□□ -1.81
NUP54-206ENST00000508465 MICBQ29980 383 aa3.73□□□□□ -1.81
NUP54-206ENST00000508465 ZNF181Q2M3W8 571 aa3.73□□□□□ -1.81
NUP54-206ENST00000508465 WDR38Q5JTN6 314 aa3.73□□□□□ -1.81
NUP54-206ENST00000508465 ZNF684Q5T5D7 378 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms