RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 HS3ST3B1Q9Y662 390 aa15.45■□□□□ 0.06
NUP54-205ENST00000507257 ARID1AO14497 2285 aa15.45■□□□□ 0.06
NUP54-205ENST00000507257 C5orf42Q9H799 3197 aa15.44■□□□□ 0.06
NUP54-205ENST00000507257 H0YL77 283 aa15.44■□□□□ 0.06
NUP54-205ENST00000507257 MKRN2OSH3BPM6 223 aa15.44■□□□□ 0.06
NUP54-205ENST00000507257 SLC31A2O15432 143 aa15.44■□□□□ 0.06
NUP54-205ENST00000507257 TLX3O43711 291 aaPredicted RBP15.44■□□□□ 0.06
NUP54-205ENST00000507257 FAHP16930 419 aa15.44■□□□□ 0.06
NUP54-205ENST00000507257 CEACAM6P40199 344 aa15.44■□□□□ 0.06
NUP54-205ENST00000507257 TAS2R60P59551 318 aa15.44■□□□□ 0.06
NUP54-205ENST00000507257 RSU1Q15404 277 aa15.44■□□□□ 0.06
NUP54-205ENST00000507257 CLDND2Q8NHS1 167 aa15.44■□□□□ 0.06
NUP54-205ENST00000507257 RNASE11Q8TAA1 199 aaKnown RBP15.44■□□□□ 0.06
NUP54-205ENST00000507257 NPRL2Q8WTW4 380 aa15.44■□□□□ 0.06
NUP54-205ENST00000507257 FAAP24Q9BTP7 215 aa15.44■□□□□ 0.06
NUP54-205ENST00000507257 DUSP15Q9H1R2 295 aaPredicted RBP15.44■□□□□ 0.06
NUP54-205ENST00000507257 ELL3Q9HB65 397 aaPredicted RBP15.44■□□□□ 0.06
NUP54-205ENST00000507257 FOXD3Q9UJU5 478 aaPredicted RBP15.44■□□□□ 0.06
NUP54-205ENST00000507257 LIPGQ9Y5X9 500 aa15.44■□□□□ 0.06
NUP54-205ENST00000507257 DUXBA0A1W2PPF3 345 aa15.43■□□□□ 0.06
NUP54-205ENST00000507257 IGSF23A1L1A6 192 aa15.43■□□□□ 0.06
NUP54-205ENST00000507257 C5orf63A6NC05 138 aa15.43■□□□□ 0.06
NUP54-205ENST00000507257 TERTO14746 1132 aaKnown RBP15.43■□□□□ 0.06
NUP54-205ENST00000507257 DBHP09172 617 aa15.43■□□□□ 0.06
NUP54-205ENST00000507257 MSR1P21757 451 aa15.43■□□□□ 0.06
NUP54-205ENST00000507257 FKBP2P26885 142 aaKnown RBP15.43■□□□□ 0.06
NUP54-205ENST00000507257 TLE4Q04727 773 aa15.43■□□□□ 0.06
NUP54-205ENST00000507257 C10orf128Q5T292 105 aa15.43■□□□□ 0.06
NUP54-205ENST00000507257 STX12Q86Y82 276 aa15.43■□□□□ 0.06
NUP54-205ENST00000507257 SLC35G3Q8N808 338 aa15.43■□□□□ 0.06
NUP54-205ENST00000507257 CYB561D1Q8N8Q1 229 aa15.43■□□□□ 0.06
NUP54-205ENST00000507257 S100PBPQ96BU1 408 aa15.43■□□□□ 0.06
NUP54-205ENST00000507257 GPR61Q9BZJ8 451 aa15.43■□□□□ 0.06
NUP54-205ENST00000507257 NXT1Q9UKK6 140 aaKnown RBP15.43■□□□□ 0.06
NUP54-205ENST00000507257 PIGLQ9Y2B2 252 aa15.43■□□□□ 0.06
NUP54-205ENST00000507257 SEC16AO15027 2179 aa15.43■□□□□ 0.06
NUP54-205ENST00000507257 MYO7BQ6PIF6 2116 aa15.43■□□□□ 0.06
NUP54-205ENST00000507257 TGIF2-C20orf24A0A0A6YYL0 155 aa15.43■□□□□ 0.06
NUP54-205ENST00000507257 CLEC18AA5D8T8 446 aa15.43■□□□□ 0.06
NUP54-205ENST00000507257 TRDCB7Z8K6 153 aa15.43■□□□□ 0.06
NUP54-205ENST00000507257 CYB5BO43169 146 aa15.43■□□□□ 0.06
NUP54-205ENST00000507257 LY86O95711 162 aa15.43■□□□□ 0.06
NUP54-205ENST00000507257 TRGC2P03986 189 aa15.43■□□□□ 0.06
NUP54-205ENST00000507257 HLA-DRB3P79483 266 aa15.43■□□□□ 0.06
NUP54-205ENST00000507257 C1orf87Q8N0U7 546 aa15.43■□□□□ 0.06
NUP54-205ENST00000507257 ZFP62Q8NB50 900 aaPredicted RBP15.43■□□□□ 0.06
NUP54-205ENST00000507257 CLEC18CQ8NCF0 446 aa15.43■□□□□ 0.06
NUP54-205ENST00000507257 OR5L1Q8NGL2 311 aa15.43■□□□□ 0.06
NUP54-205ENST00000507257 OR1L3Q8NH93 324 aa15.43■□□□□ 0.06
NUP54-205ENST00000507257 TMEM56Q96MV1 263 aa15.43■□□□□ 0.06
NUP54-205ENST00000507257 C2orf88Q9BSF0 95 aa15.43■□□□□ 0.06
NUP54-205ENST00000507257 ZNF286AQ9HBT8 521 aa15.43■□□□□ 0.06
NUP54-205ENST00000507257 PLSCR2Q9NRY7 297 aa15.43■□□□□ 0.06
NUP54-205ENST00000507257 B3GALT1Q9Y5Z6 326 aa15.43■□□□□ 0.06
NUP54-205ENST00000507257 TMEM56-RWDD3S4R434 201 aa15.43■□□□□ 0.06
NUP54-205ENST00000507257 PCDH15Q96QU1 1955 aa15.42■□□□□ 0.06
NUP54-205ENST00000507257 TRBV24-1A0A075B6N3 115 aa15.42■□□□□ 0.06
NUP54-205ENST00000507257 A0A1B0GX78 115 aa15.42■□□□□ 0.06
NUP54-205ENST00000507257 A0A1W2PPC4 97 aa15.42■□□□□ 0.06
NUP54-205ENST00000507257 C2orf72A6NCS6 295 aa15.42■□□□□ 0.06
NUP54-205ENST00000507257 FAM24AA6NFZ4 105 aa15.42■□□□□ 0.06
NUP54-205ENST00000507257 AQP7P3A6NL99 342 aa15.42■□□□□ 0.06
NUP54-205ENST00000507257 PHOX2AO14813 284 aa15.42■□□□□ 0.06
NUP54-205ENST00000507257 PHF1O43189 567 aaPredicted RBP15.42■□□□□ 0.06
NUP54-205ENST00000507257 ATXN8OSP0DMR3 200 aa15.42■□□□□ 0.06
NUP54-205ENST00000507257 KLK2P20151 261 aa15.42■□□□□ 0.06
NUP54-205ENST00000507257 NKX2-1P43699 371 aaPredicted RBP15.42■□□□□ 0.06
NUP54-205ENST00000507257 GAMTQ14353 236 aa15.42■□□□□ 0.06
NUP54-205ENST00000507257 PHLDA2Q53GA4 152 aa15.42■□□□□ 0.06
NUP54-205ENST00000507257 OR2T2Q6IF00 324 aa15.42■□□□□ 0.06
NUP54-205ENST00000507257 LANCL3Q6ZV70 420 aa15.42■□□□□ 0.06
NUP54-205ENST00000507257 ZNF100Q8IYN0 542 aa15.42■□□□□ 0.06
NUP54-205ENST00000507257 TMEM252Q8N6L7 170 aa15.42■□□□□ 0.06
NUP54-205ENST00000507257 PIGTQ969N2 578 aa15.42■□□□□ 0.06
NUP54-205ENST00000507257 POM121Q96HA1 1249 aa15.42■□□□□ 0.06
NUP54-205ENST00000507257 NKX2-4Q9H2Z4 354 aa15.42■□□□□ 0.06
NUP54-205ENST00000507257 MMP17Q9ULZ9 603 aa15.42■□□□□ 0.06
NUP54-205ENST00000507257 NCOA6Q14686 2063 aaPredicted RBP15.42■□□□□ 0.06
NUP54-205ENST00000507257 MKI67P46013 3256 aaKnown RBP15.41■□□□□ 0.06
NUP54-205ENST00000507257 A0A1B0GV50 99 aa15.41■□□□□ 0.06
NUP54-205ENST00000507257 CDRT15L2A8MXV6 281 aa15.41■□□□□ 0.06
NUP54-205ENST00000507257 TRGC1P0CF51 173 aa15.41■□□□□ 0.06
NUP54-205ENST00000507257 FOLR1P15328 257 aa15.41■□□□□ 0.06
NUP54-205ENST00000507257 PNLIPP16233 465 aa15.41■□□□□ 0.06
NUP54-205ENST00000507257 EXT1Q16394 746 aa15.41■□□□□ 0.06
NUP54-205ENST00000507257 TSPO2Q5TGU0 170 aa15.41■□□□□ 0.06
NUP54-205ENST00000507257 NFAM1Q8NET5 270 aaPredicted RBP15.41■□□□□ 0.06
NUP54-205ENST00000507257 RNASEH2CQ8TDP1 164 aaKnown RBP15.41■□□□□ 0.06
NUP54-205ENST00000507257 ABHD5Q8WTS1 349 aa15.41■□□□□ 0.06
NUP54-205ENST00000507257 TMEM171Q8WVE6 324 aa15.41■□□□□ 0.06
NUP54-205ENST00000507257 REEP6Q96HR9 211 aa15.41■□□□□ 0.06
NUP54-205ENST00000507257 FAM210BQ96KR6 192 aa15.41■□□□□ 0.06
NUP54-205ENST00000507257 ABHD14AQ9BUJ0 271 aa15.41■□□□□ 0.06
NUP54-205ENST00000507257 TMEM222Q9H0R3 208 aa15.41■□□□□ 0.06
NUP54-205ENST00000507257 LOC102723971A0A1B0GUV8 181 aa15.41■□□□□ 0.06
NUP54-205ENST00000507257 MED19A0JLT2 244 aaPredicted RBP15.41■□□□□ 0.06
NUP54-205ENST00000507257 CA3P07451 260 aa15.41■□□□□ 0.06
NUP54-205ENST00000507257 OPRM1P35372 400 aa15.41■□□□□ 0.06
NUP54-205ENST00000507257 RRADP55042 308 aa15.41■□□□□ 0.06
NUP54-205ENST00000507257 ENDOGQ14249 297 aaKnown RBP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms