RNA–Protein interactions for RNA: ENST00000506573.1

DDR1-258, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-258ENST00000506573 ALKBH1Q13686 389 aaKnown RBP12.67□□□□□ -0.38
DDR1-258ENST00000506573 GRK1Q15835 563 aa12.67□□□□□ -0.38
DDR1-258ENST00000506573 OR4C13Q8NGP0 309 aa12.67□□□□□ -0.38
DDR1-258ENST00000506573 ADAT3Q96EY9 351 aaPredicted RBP12.67□□□□□ -0.38
DDR1-258ENST00000506573 ZNF714Q96N38 554 aa12.67□□□□□ -0.38
DDR1-258ENST00000506573 CITED1Q99966 193 aa12.67□□□□□ -0.38
DDR1-258ENST00000506573 TBL2Q9Y4P3 447 aaKnown RBP12.67□□□□□ -0.38
DDR1-258ENST00000506573 MEGF8Q7Z7M0 2845 aa12.66□□□□□ -0.38
DDR1-258ENST00000506573 IGKV1-27A0A075B6S5 117 aa12.66□□□□□ -0.38
DDR1-258ENST00000506573 TMEM212A6NML5 194 aa12.66□□□□□ -0.38
DDR1-258ENST00000506573 C17orf98A8MV24 154 aa12.66□□□□□ -0.38
DDR1-258ENST00000506573 MAGEB3O15480 346 aa12.66□□□□□ -0.38
DDR1-258ENST00000506573 BAG2O95816 211 aa12.66□□□□□ -0.38
DDR1-258ENST00000506573 MT-ND2P03891 347 aa12.66□□□□□ -0.38
DDR1-258ENST00000506573 PRKACAP17612 351 aa12.66□□□□□ -0.38
DDR1-258ENST00000506573 GABRA5P31644 462 aa12.66□□□□□ -0.38
DDR1-258ENST00000506573 PDZK1IP1Q13113 114 aa12.66□□□□□ -0.38
DDR1-258ENST00000506573 EDDM3AQ14507 147 aa12.66□□□□□ -0.38
DDR1-258ENST00000506573 ZNF273Q14593 569 aa12.66□□□□□ -0.38
DDR1-258ENST00000506573 Q6ZSV7 163 aa12.66□□□□□ -0.38
DDR1-258ENST00000506573 LHFPL3Q86UP9 236 aa12.66□□□□□ -0.38
DDR1-258ENST00000506573 SERPINA12Q8IW75 414 aa12.66□□□□□ -0.38
DDR1-258ENST00000506573 PQLC1Q8N2U9 271 aa12.66□□□□□ -0.38
DDR1-258ENST00000506573 OR5AK2Q8NH90 309 aa12.66□□□□□ -0.38
DDR1-258ENST00000506573 RHOXF1Q8NHV9 184 aa12.66□□□□□ -0.38
DDR1-258ENST00000506573 PELI1Q96FA3 418 aa12.66□□□□□ -0.38
DDR1-258ENST00000506573 RDH12Q96NR8 316 aa12.66□□□□□ -0.38
DDR1-258ENST00000506573 EXOSC4Q9NPD3 245 aaKnown RBP12.66□□□□□ -0.38
DDR1-258ENST00000506573 PITPNC1Q9UKF7 332 aa12.66□□□□□ -0.38
DDR1-258ENST00000506573 LINC00312Q9Y6C7 94 aa12.66□□□□□ -0.38
DDR1-258ENST00000506573 IRGMA1A4Y4 181 aa12.65□□□□□ -0.38
DDR1-258ENST00000506573 MGST3O14880 152 aa12.65□□□□□ -0.38
DDR1-258ENST00000506573 ZNF737O75373 536 aa12.65□□□□□ -0.38
DDR1-258ENST00000506573 ARG1P05089 322 aa12.65□□□□□ -0.38
DDR1-258ENST00000506573 HCKP08631 526 aa12.65□□□□□ -0.38
DDR1-258ENST00000506573 BMXP51813 675 aa12.65□□□□□ -0.38
DDR1-258ENST00000506573 NANOS3P60323 173 aaKnown RBP12.65□□□□□ -0.38
DDR1-258ENST00000506573 DYNC1I2Q13409 638 aaKnown RBP12.65□□□□□ -0.38
DDR1-258ENST00000506573 ZNF146Q15072 292 aa12.65□□□□□ -0.38
DDR1-258ENST00000506573 HCP5Q6MZN7 132 aa12.65□□□□□ -0.38
DDR1-258ENST00000506573 ZNF782Q6ZMW2 699 aaPredicted RBP12.65□□□□□ -0.38
DDR1-258ENST00000506573 TRAPPC6BQ86SZ2 158 aa12.65□□□□□ -0.38
DDR1-258ENST00000506573 SAXO1Q8IYX7 474 aa12.65□□□□□ -0.38
DDR1-258ENST00000506573 TSEN15Q8WW01 171 aaKnown RBP12.65□□□□□ -0.38
DDR1-258ENST00000506573 MALSU1Q96EH3 234 aa12.65□□□□□ -0.38
DDR1-258ENST00000506573 NPFFR1Q9GZQ6 430 aa12.65□□□□□ -0.38
DDR1-258ENST00000506573 ZCCHC4Q9H5U6 513 aa12.65□□□□□ -0.38
DDR1-258ENST00000506573 RANBP3Q9H6Z4 567 aaPredicted RBP12.65□□□□□ -0.38
DDR1-258ENST00000506573 RBFOX1Q9NWB1 397 aaKnown RBP12.65□□□□□ -0.38
DDR1-258ENST00000506573 DHDHQ9UQ10 334 aa12.65□□□□□ -0.38
DDR1-258ENST00000506573 IGKV1-9A0A0C4DH69 117 aa12.64□□□□□ -0.39
DDR1-258ENST00000506573 OR4C45A6NMZ5 311 aa12.64□□□□□ -0.39
DDR1-258ENST00000506573 F8VVB4 439 aa12.64□□□□□ -0.39
DDR1-258ENST00000506573 F8VWA3 439 aa12.64□□□□□ -0.39
DDR1-258ENST00000506573 IGHV1-8P0DP01 117 aa12.64□□□□□ -0.39
DDR1-258ENST00000506573 BCL3P20749 454 aa12.64□□□□□ -0.39
DDR1-258ENST00000506573 PROK1P58294 105 aa12.64□□□□□ -0.39
DDR1-258ENST00000506573 MED21Q13503 144 aa12.64□□□□□ -0.39
DDR1-258ENST00000506573 LY6EQ16553 131 aa12.64□□□□□ -0.39
DDR1-258ENST00000506573 ZSCAN26Q16670 478 aa12.64□□□□□ -0.39
DDR1-258ENST00000506573 OR52W1Q6IF63 320 aa12.64□□□□□ -0.39
DDR1-258ENST00000506573 TMPRSS11AQ6ZMR5 421 aa12.64□□□□□ -0.39
DDR1-258ENST00000506573 CHST4Q8NCG5 386 aa12.64□□□□□ -0.39
DDR1-258ENST00000506573 OR13C9Q8NGT0 318 aa12.64□□□□□ -0.39
DDR1-258ENST00000506573 OR2T6Q8NHC8 308 aa12.64□□□□□ -0.39
DDR1-258ENST00000506573 RPS4Y2Q8TD47 263 aa12.64□□□□□ -0.39
DDR1-258ENST00000506573 CDCA4Q9BXL8 241 aa12.64□□□□□ -0.39
DDR1-258ENST00000506573 MMP27Q9H306 513 aa12.64□□□□□ -0.39
DDR1-258ENST00000506573 GAL3ST2Q9H3Q3 398 aa12.64□□□□□ -0.39
DDR1-258ENST00000506573 HMG20AQ9NP66 347 aa12.64□□□□□ -0.39
DDR1-258ENST00000506573 C8orf4Q9NR00 106 aa12.64□□□□□ -0.39
DDR1-258ENST00000506573 FAM118AQ9NWS6 357 aa12.64□□□□□ -0.39
DDR1-258ENST00000506573 ERVK13-1Q9NX77 482 aa12.64□□□□□ -0.39
DDR1-258ENST00000506573 SMPD3Q9NY59 655 aaPredicted RBP12.64□□□□□ -0.39
DDR1-258ENST00000506573 FBLN5Q9UBX5 448 aa12.64□□□□□ -0.39
DDR1-258ENST00000506573 UBE2J1Q9Y385 318 aaPredicted RBP12.64□□□□□ -0.39
DDR1-258ENST00000506573 TRGV10A0A0A0MS01 117 aa12.63□□□□□ -0.39
DDR1-258ENST00000506573 E9PQ18 207 aa12.63□□□□□ -0.39
DDR1-258ENST00000506573 ALX3O95076 343 aa12.63□□□□□ -0.39
DDR1-258ENST00000506573 IGHA1P01876 353 aa12.63□□□□□ -0.39
DDR1-258ENST00000506573 CD2P06729 351 aa12.63□□□□□ -0.39
DDR1-258ENST00000506573 TMEM225BP0DP42 221 aa12.63□□□□□ -0.39
DDR1-258ENST00000506573 GABRB1P18505 474 aa12.63□□□□□ -0.39
DDR1-258ENST00000506573 ERP29P30040 261 aaKnown RBP12.63□□□□□ -0.39
DDR1-258ENST00000506573 NPBWR2P48146 333 aa12.63□□□□□ -0.39
DDR1-258ENST00000506573 ARHGDIBP52566 201 aa12.63□□□□□ -0.39
DDR1-258ENST00000506573 SNU13P55769 128 aaKnown RBP12.63□□□□□ -0.39
DDR1-258ENST00000506573 C2orf68Q2NKX9 166 aa12.63□□□□□ -0.39
DDR1-258ENST00000506573 LPCAT4Q643R3 524 aa12.63□□□□□ -0.39
DDR1-258ENST00000506573 SLC35E4Q6ICL7 350 aa12.63□□□□□ -0.39
DDR1-258ENST00000506573 Q6ZTK2 550 aa12.63□□□□□ -0.39
DDR1-258ENST00000506573 C11orf42Q8N5U0 333 aa12.63□□□□□ -0.39
DDR1-258ENST00000506573 OR11H6Q8NGC7 330 aa12.63□□□□□ -0.39
DDR1-258ENST00000506573 CHST6Q9GZX3 395 aa12.63□□□□□ -0.39
DDR1-258ENST00000506573 AMBNQ9NP70 447 aa12.63□□□□□ -0.39
DDR1-258ENST00000506573 MRPS18AQ9NVS2 196 aaKnown RBP12.63□□□□□ -0.39
DDR1-258ENST00000506573 CHCHD3Q9NX63 227 aaKnown RBP12.63□□□□□ -0.39
DDR1-258ENST00000506573 GSTK1Q9Y2Q3 226 aa12.63□□□□□ -0.39
DDR1-258ENST00000506573 SESN1Q9Y6P5 492 aa12.63□□□□□ -0.39
DDR1-258ENST00000506573 TMEM82A0PJX8 343 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms