RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 GZMMP51124 257 aa1.71□□□□□ -2.14
TOPBP1-204ENST00000505804 ZNF404Q494X3 552 aa1.71□□□□□ -2.14
TOPBP1-204ENST00000505804 CA13Q8N1Q1 262 aa1.71□□□□□ -2.14
TOPBP1-204ENST00000505804 OR8A1Q8NGG7 326 aa1.71□□□□□ -2.14
TOPBP1-204ENST00000505804 OR4A15Q8NGL6 344 aa1.71□□□□□ -2.14
TOPBP1-204ENST00000505804 UBA3Q8TBC4 463 aa1.71□□□□□ -2.14
TOPBP1-204ENST00000505804 FAM131CQ96AQ9 280 aa1.71□□□□□ -2.14
TOPBP1-204ENST00000505804 QKIQ96PU8 341 aaKnown RBP eCLIP1.71□□□□□ -2.14
TOPBP1-204ENST00000505804 BCL7BQ9BQE9 202 aa1.71□□□□□ -2.14
TOPBP1-204ENST00000505804 BEX2Q9BXY8 128 aa1.71□□□□□ -2.14
TOPBP1-204ENST00000505804 GAL3ST2Q9H3Q3 398 aa1.71□□□□□ -2.14
TOPBP1-204ENST00000505804 ANXA10Q9UJ72 324 aa1.71□□□□□ -2.14
TOPBP1-204ENST00000505804 AP3M1Q9Y2T2 418 aa1.71□□□□□ -2.14
TOPBP1-204ENST00000505804 V9GYY9 64 aa1.71□□□□□ -2.14
TOPBP1-204ENST00000505804 MUC19Q7Z5P9 8384 aa1.7□□□□□ -2.14
TOPBP1-204ENST00000505804 A0A0B4J2C4 111 aa1.7□□□□□ -2.14
TOPBP1-204ENST00000505804 SDHAF1A6NFY7 115 aa1.7□□□□□ -2.14
TOPBP1-204ENST00000505804 ZNF729A6NN14 1252 aaPredicted RBP1.7□□□□□ -2.14
TOPBP1-204ENST00000505804 OR2AT4A6NND4 320 aa1.7□□□□□ -2.14
TOPBP1-204ENST00000505804 GGTLC3B5MD39 225 aa1.7□□□□□ -2.14
TOPBP1-204ENST00000505804 TCAPO15273 167 aa1.7□□□□□ -2.14
TOPBP1-204ENST00000505804 SNAI1O95863 264 aaPredicted RBP1.7□□□□□ -2.14
TOPBP1-204ENST00000505804 IGKV1D-33P01593 117 aa1.7□□□□□ -2.14
TOPBP1-204ENST00000505804 IGKV1-33P01594 117 aa1.7□□□□□ -2.14
TOPBP1-204ENST00000505804 IGHV3-53P01767 116 aa1.7□□□□□ -2.14
TOPBP1-204ENST00000505804 HTR2CP28335 458 aa1.7□□□□□ -2.14
TOPBP1-204ENST00000505804 HTR2BP41595 481 aa1.7□□□□□ -2.14
TOPBP1-204ENST00000505804 GPR176Q14439 515 aa1.7□□□□□ -2.14
TOPBP1-204ENST00000505804 TMEM241Q24JQ0 296 aa1.7□□□□□ -2.14
TOPBP1-204ENST00000505804 LGALSLQ3ZCW2 172 aaPredicted RBP1.7□□□□□ -2.14
TOPBP1-204ENST00000505804 ATP6AP1LQ52LC2 224 aa1.7□□□□□ -2.14
TOPBP1-204ENST00000505804 IDNKQ5T6J7 187 aa1.7□□□□□ -2.14
TOPBP1-204ENST00000505804 ZNF773Q6PK81 442 aa1.7□□□□□ -2.14
TOPBP1-204ENST00000505804 COMTD1Q86VU5 262 aa1.7□□□□□ -2.14
TOPBP1-204ENST00000505804 ZFP82Q8N141 532 aa1.7□□□□□ -2.14
TOPBP1-204ENST00000505804 ATPAF2Q8N5M1 289 aa1.7□□□□□ -2.14
TOPBP1-204ENST00000505804 UTP23Q9BRU9 249 aaKnown RBP1.7□□□□□ -2.14
TOPBP1-204ENST00000505804 SHCBP1LQ9BZQ2 653 aa1.7□□□□□ -2.14
TOPBP1-204ENST00000505804 TDRD3Q9H7E2 651 aaKnown RBP1.7□□□□□ -2.14
TOPBP1-204ENST00000505804 SDHAF3Q9NRP4 125 aa1.7□□□□□ -2.14
TOPBP1-204ENST00000505804 AK9Q5TCS8 1911 aa1.7□□□□□ -2.14
TOPBP1-204ENST00000505804 A8MWP4 228 aa1.69□□□□□ -2.14
TOPBP1-204ENST00000505804 K7ERS5 55 aa1.69□□□□□ -2.14
TOPBP1-204ENST00000505804 CRYGCP07315 174 aa1.69□□□□□ -2.14
TOPBP1-204ENST00000505804 STAG3L2P0CL84 134 aa1.69□□□□□ -2.14
TOPBP1-204ENST00000505804 ZNF708P17019 499 aa1.69□□□□□ -2.14
TOPBP1-204ENST00000505804 ARR3P36575 388 aa1.69□□□□□ -2.14
TOPBP1-204ENST00000505804 GPR4P46093 362 aa1.69□□□□□ -2.14
TOPBP1-204ENST00000505804 HSP90AA4PQ58FG1 418 aa1.69□□□□□ -2.14
TOPBP1-204ENST00000505804 TTMPQ5BVD1 217 aa1.69□□□□□ -2.14
TOPBP1-204ENST00000505804 UBE2NLQ5JXB2 153 aa1.69□□□□□ -2.14
TOPBP1-204ENST00000505804 C16orf87Q6PH81 154 aa1.69□□□□□ -2.14
TOPBP1-204ENST00000505804 UGT2A3Q6UWM9 527 aa1.69□□□□□ -2.14
TOPBP1-204ENST00000505804 CPNE9Q8IYJ1 553 aa1.69□□□□□ -2.14
TOPBP1-204ENST00000505804 RPRMLQ8N4K4 120 aa1.69□□□□□ -2.14
TOPBP1-204ENST00000505804 C2orf15Q8WU43 125 aaKnown RBP1.69□□□□□ -2.14
TOPBP1-204ENST00000505804 SLC25A44Q96H78 314 aaPredicted RBP1.69□□□□□ -2.14
TOPBP1-204ENST00000505804 MAP1LC3CQ9BXW4 147 aa1.69□□□□□ -2.14
TOPBP1-204ENST00000505804 TSGA10Q9BZW7 698 aa1.69□□□□□ -2.14
TOPBP1-204ENST00000505804 TXNIPQ9H3M7 391 aa1.69□□□□□ -2.14
TOPBP1-204ENST00000505804 ANKHQ9HCJ1 492 aa1.69□□□□□ -2.14
TOPBP1-204ENST00000505804 NLE1Q9NVX2 485 aaPredicted RBP1.69□□□□□ -2.14
TOPBP1-204ENST00000505804 NOS1P29475 1434 aa1.68□□□□□ -2.14
TOPBP1-204ENST00000505804 IGHV3-21A0A0B4J1V1 117 aa1.68□□□□□ -2.14
TOPBP1-204ENST00000505804 IGHV3-43A0A0B4J1X8 118 aa1.68□□□□□ -2.14
TOPBP1-204ENST00000505804 LEUTXA8MZ59 168 aa1.68□□□□□ -2.14
TOPBP1-204ENST00000505804 RFXANKO14593 260 aa1.68□□□□□ -2.14
TOPBP1-204ENST00000505804 KDELR3O43731 214 aa1.68□□□□□ -2.14
TOPBP1-204ENST00000505804 PSIP1O75475 530 aaKnown RBP1.68□□□□□ -2.14
TOPBP1-204ENST00000505804 NKAIN1Q4KMZ8 207 aa1.68□□□□□ -2.14
TOPBP1-204ENST00000505804 CLEC12AQ5QGZ9 265 aa1.68□□□□□ -2.14
TOPBP1-204ENST00000505804 C6orf183Q5T699 404 aa1.68□□□□□ -2.14
TOPBP1-204ENST00000505804 CYHR1Q6ZMK1 362 aa1.68□□□□□ -2.14
TOPBP1-204ENST00000505804 Q6ZQT7 251 aa1.68□□□□□ -2.14
TOPBP1-204ENST00000505804 GAPTQ8N292 157 aa1.68□□□□□ -2.14
TOPBP1-204ENST00000505804 OR5P3Q8WZ94 311 aa1.68□□□□□ -2.14
TOPBP1-204ENST00000505804 ADTRPQ96IZ2 230 aa1.68□□□□□ -2.14
TOPBP1-204ENST00000505804 YPEL4Q96NS1 127 aa1.68□□□□□ -2.14
TOPBP1-204ENST00000505804 GABARAPL1Q9H0R8 117 aa1.68□□□□□ -2.14
TOPBP1-204ENST00000505804 RBM12B-AS1Q9P1G2 102 aa1.68□□□□□ -2.14
TOPBP1-204ENST00000505804 ZNF443Q9Y2A4 671 aaPredicted RBP1.68□□□□□ -2.14
TOPBP1-204ENST00000505804 F5H5P2 479 aa1.67□□□□□ -2.14
TOPBP1-204ENST00000505804 ZNF593O00488 134 aaPredicted RBP1.67□□□□□ -2.14
TOPBP1-204ENST00000505804 UPK2O00526 184 aa1.67□□□□□ -2.14
TOPBP1-204ENST00000505804 GYG2O15488 501 aa1.67□□□□□ -2.14
TOPBP1-204ENST00000505804 SLC37A4O43826 429 aa1.67□□□□□ -2.14
TOPBP1-204ENST00000505804 SOD3P08294 240 aa1.67□□□□□ -2.14
TOPBP1-204ENST00000505804 CGB3P0DN86 165 aa1.67□□□□□ -2.14
TOPBP1-204ENST00000505804 CGB7P0DN87 165 aa1.67□□□□□ -2.14
TOPBP1-204ENST00000505804 MLNP12872 115 aa1.67□□□□□ -2.14
TOPBP1-204ENST00000505804 M6PRP20645 277 aa1.67□□□□□ -2.14
TOPBP1-204ENST00000505804 CCL23P55773 120 aa1.67□□□□□ -2.14
TOPBP1-204ENST00000505804 BNIP2Q12982 314 aa1.67□□□□□ -2.14
TOPBP1-204ENST00000505804 CEACAM16Q2WEN9 425 aa1.67□□□□□ -2.14
TOPBP1-204ENST00000505804 TMPPEQ6ZT21 453 aa1.67□□□□□ -2.14
TOPBP1-204ENST00000505804 C3orf22Q8N5N4 141 aa1.67□□□□□ -2.14
TOPBP1-204ENST00000505804 OR6K3Q8NGY3 331 aa1.67□□□□□ -2.14
TOPBP1-204ENST00000505804 OR6N2Q8NGY6 317 aa1.67□□□□□ -2.14
TOPBP1-204ENST00000505804 PHOSPHO2Q8TCD6 241 aa1.67□□□□□ -2.14
TOPBP1-204ENST00000505804 FMC1Q96HJ9 113 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms