RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 THNSL2Q86YJ6 484 aa6.67□□□□□ -1.34
NEDD9-208ENST00000504387 PLPP5Q8NEB5 264 aa6.67□□□□□ -1.34
NEDD9-208ENST00000504387 PHOSPHO2Q8TCD6 241 aa6.67□□□□□ -1.34
NEDD9-208ENST00000504387 THRSPQ92748 146 aa6.67□□□□□ -1.34
NEDD9-208ENST00000504387 ZNF665Q9H7R5 613 aa6.67□□□□□ -1.34
NEDD9-208ENST00000504387 SUSD2Q9UGT4 822 aa6.67□□□□□ -1.34
NEDD9-208ENST00000504387 LAMP3Q9UQV4 416 aa6.67□□□□□ -1.34
NEDD9-208ENST00000504387 NSG2Q9Y328 171 aa6.67□□□□□ -1.34
NEDD9-208ENST00000504387 CLDN16Q9Y5I7 305 aa6.67□□□□□ -1.34
NEDD9-208ENST00000504387 AHCTF1Q8WYP5 2266 aa6.66□□□□□ -1.34
NEDD9-208ENST00000504387 IGHV3-15A0A0B4J1V0 119 aa6.66□□□□□ -1.34
NEDD9-208ENST00000504387 A0A0U1RQK1 487 aa6.66□□□□□ -1.34
NEDD9-208ENST00000504387 SHISA7A6NL88 538 aa6.66□□□□□ -1.34
NEDD9-208ENST00000504387 ST8SIA3O43173 380 aa6.66□□□□□ -1.34
NEDD9-208ENST00000504387 CHRM2P08172 466 aa6.66□□□□□ -1.34
NEDD9-208ENST00000504387 PATE4P0C8F1 98 aa6.66□□□□□ -1.34
NEDD9-208ENST00000504387 ZNF728P0DKX0 622 aa6.66□□□□□ -1.34
NEDD9-208ENST00000504387 WNT5AP41221 380 aa6.66□□□□□ -1.34
NEDD9-208ENST00000504387 P2RY1P47900 373 aa6.66□□□□□ -1.34
NEDD9-208ENST00000504387 ELLP55199 621 aaPredicted RBP6.66□□□□□ -1.34
NEDD9-208ENST00000504387 OR1D5P58170 312 aa6.66□□□□□ -1.34
NEDD9-208ENST00000504387 HSF1Q00613 529 aa6.66□□□□□ -1.34
NEDD9-208ENST00000504387 EWSR1Q01844 656 aaKnown RBP eCLIP6.66□□□□□ -1.34
NEDD9-208ENST00000504387 CST9LP1Q5W188 147 aa6.66□□□□□ -1.34
NEDD9-208ENST00000504387 CMTM1Q8IZ96 169 aa6.66□□□□□ -1.34
NEDD9-208ENST00000504387 COMMD1Q8N668 190 aa6.66□□□□□ -1.34
NEDD9-208ENST00000504387 UBALD1Q8TB05 177 aa6.66□□□□□ -1.34
NEDD9-208ENST00000504387 TMEM171Q8WVE6 324 aa6.66□□□□□ -1.34
NEDD9-208ENST00000504387 RPUSD4Q96CM3 377 aaKnown RBP6.66□□□□□ -1.34
NEDD9-208ENST00000504387 RBM14Q96PK6 669 aaKnown RBP6.66□□□□□ -1.34
NEDD9-208ENST00000504387 RSG1Q9BU20 258 aa6.66□□□□□ -1.34
NEDD9-208ENST00000504387 KLRF1Q9NZS2 232 aa6.66□□□□□ -1.34
NEDD9-208ENST00000504387 FOXD3Q9UJU5 478 aaPredicted RBP6.66□□□□□ -1.34
NEDD9-208ENST00000504387 SRPK3Q9UPE1 567 aa6.66□□□□□ -1.34
NEDD9-208ENST00000504387 A0A1W2PPQ1 181 aa6.66□□□□□ -1.34
NEDD9-208ENST00000504387 IGSF23A1L1A6 192 aa6.66□□□□□ -1.34
NEDD9-208ENST00000504387 G3V3Y1 287 aa6.66□□□□□ -1.34
NEDD9-208ENST00000504387 OR2J2O76002 312 aa6.66□□□□□ -1.34
NEDD9-208ENST00000504387 MBP02144 154 aa6.66□□□□□ -1.34
NEDD9-208ENST00000504387 GUSBP08236 651 aa6.66□□□□□ -1.34
NEDD9-208ENST00000504387 GNRHRP30968 328 aa6.66□□□□□ -1.34
NEDD9-208ENST00000504387 CD200P41217 278 aa6.66□□□□□ -1.34
NEDD9-208ENST00000504387 CSNK1A1P48729 337 aa6.66□□□□□ -1.34
NEDD9-208ENST00000504387 RPS18P62269 152 aaKnown RBP6.66□□□□□ -1.34
NEDD9-208ENST00000504387 VAMP2P63027 116 aa6.66□□□□□ -1.34
NEDD9-208ENST00000504387 TMEM267Q0VDI3 215 aaPredicted RBP6.66□□□□□ -1.34
NEDD9-208ENST00000504387 IL15RAQ13261 267 aa6.66□□□□□ -1.34
NEDD9-208ENST00000504387 PMS2P11Q13670 270 aa6.66□□□□□ -1.34
NEDD9-208ENST00000504387 SLC22A25Q6T423 547 aa6.66□□□□□ -1.34
NEDD9-208ENST00000504387 ZNF66Q6ZN08 573 aa6.66□□□□□ -1.34
NEDD9-208ENST00000504387 LGI3Q8N145 548 aa6.66□□□□□ -1.34
NEDD9-208ENST00000504387 SLC35G3Q8N808 338 aa6.66□□□□□ -1.34
NEDD9-208ENST00000504387 TVP23CQ96ET8 276 aa6.66□□□□□ -1.34
NEDD9-208ENST00000504387 SHDQ96IW2 340 aa6.66□□□□□ -1.34
NEDD9-208ENST00000504387 CFHR5Q9BXR6 569 aa6.66□□□□□ -1.34
NEDD9-208ENST00000504387 SLC25A31Q9H0C2 315 aa6.66□□□□□ -1.34
NEDD9-208ENST00000504387 BCO1Q9HAY6 547 aa6.66□□□□□ -1.34
NEDD9-208ENST00000504387 SIRT7Q9NRC8 400 aa6.66□□□□□ -1.34
NEDD9-208ENST00000504387 PCDH15Q96QU1 1955 aa6.66□□□□□ -1.34
NEDD9-208ENST00000504387 TRIOBPQ9H2D6 2365 aa6.66□□□□□ -1.34
NEDD9-208ENST00000504387 LOC390937A0A1W2PQ73 354 aa6.65□□□□□ -1.34
NEDD9-208ENST00000504387 XKRY2A2RUG3 117 aa6.65□□□□□ -1.34
NEDD9-208ENST00000504387 CEBPZOSA8MTT3 80 aa6.65□□□□□ -1.34
NEDD9-208ENST00000504387 ZNF705FA8MVS1 300 aaPredicted RBP6.65□□□□□ -1.34
NEDD9-208ENST00000504387 TNFSF14O43557 240 aa6.65□□□□□ -1.34
NEDD9-208ENST00000504387 SRSF10O75494 262 aaKnown RBP6.65□□□□□ -1.34
NEDD9-208ENST00000504387 SRP19P09132 144 aaKnown RBP6.65□□□□□ -1.34
NEDD9-208ENST00000504387 GSTP1P09211 210 aaKnown RBP6.65□□□□□ -1.34
NEDD9-208ENST00000504387 ZNF705DP0CH99 300 aaPredicted RBP6.65□□□□□ -1.34
NEDD9-208ENST00000504387 ZNF705BP0CI00 300 aaPredicted RBP6.65□□□□□ -1.34
NEDD9-208ENST00000504387 GZMBP10144 247 aa6.65□□□□□ -1.34
NEDD9-208ENST00000504387 PCP4P48539 62 aa6.65□□□□□ -1.34
NEDD9-208ENST00000504387 DYNLT3P51808 116 aa6.65□□□□□ -1.34
NEDD9-208ENST00000504387 TAS2R46P59540 309 aa6.65□□□□□ -1.34
NEDD9-208ENST00000504387 CLN3Q13286 438 aa6.65□□□□□ -1.34
NEDD9-208ENST00000504387 PIGYQ3MUY2 71 aa6.65□□□□□ -1.34
NEDD9-208ENST00000504387 VAX1Q5SQQ9 334 aa6.65□□□□□ -1.34
NEDD9-208ENST00000504387 RALGAPA1Q6GYQ0 2036 aa6.65□□□□□ -1.34
NEDD9-208ENST00000504387 BTNL3Q6UXE8 466 aa6.65□□□□□ -1.34
NEDD9-208ENST00000504387 CALHM1Q8IU99 346 aa6.65□□□□□ -1.34
NEDD9-208ENST00000504387 RP1L1Q8IWN7 2480 aaPredicted RBP6.65□□□□□ -1.34
NEDD9-208ENST00000504387 C1orf147Q96MC9 270 aaPredicted RBP6.65□□□□□ -1.34
NEDD9-208ENST00000504387 DDA1Q9BW61 102 aa6.65□□□□□ -1.34
NEDD9-208ENST00000504387 GPR87Q9BY21 358 aa6.65□□□□□ -1.34
NEDD9-208ENST00000504387 ADAM19Q9H013 955 aa6.65□□□□□ -1.34
NEDD9-208ENST00000504387 CALHM2Q9HA72 323 aa6.65□□□□□ -1.34
NEDD9-208ENST00000504387 MSL2Q9HCI7 577 aa6.65□□□□□ -1.34
NEDD9-208ENST00000504387 CUTCQ9NTM9 273 aa6.65□□□□□ -1.34
NEDD9-208ENST00000504387 PIGLQ9Y2B2 252 aa6.65□□□□□ -1.34
NEDD9-208ENST00000504387 UBE2J1Q9Y385 318 aaPredicted RBP6.65□□□□□ -1.34
NEDD9-208ENST00000504387 CACNA1EQ15878 2313 aa6.65□□□□□ -1.34
NEDD9-208ENST00000504387 SVILO95425 2214 aa6.65□□□□□ -1.34
NEDD9-208ENST00000504387 FIGNL2A6NMB9 653 aa6.65□□□□□ -1.34
NEDD9-208ENST00000504387 FTCDNL1E5RQL4 147 aa6.65□□□□□ -1.34
NEDD9-208ENST00000504387 PTBP3O95758 552 aaKnown RBP6.65□□□□□ -1.34
NEDD9-208ENST00000504387 IL33O95760 270 aa6.65□□□□□ -1.34
NEDD9-208ENST00000504387 SEC11BP0C7V7 166 aa6.65□□□□□ -1.34
NEDD9-208ENST00000504387 DEFA4P12838 97 aa6.65□□□□□ -1.34
NEDD9-208ENST00000504387 ZNF17P17021 662 aa6.65□□□□□ -1.34
NEDD9-208ENST00000504387 DUSP1P28562 367 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms