RNA–Protein interactions for RNA: ENST00000502453.1

SUB1-202, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 4,273 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-202ENST00000502453 SARAFQ96BY9 339 aa3.1□□□□□ -1.91
SUB1-202ENST00000502453 PPCDCQ96CD2 204 aa3.1□□□□□ -1.91
SUB1-202ENST00000502453 SEH1LQ96EE3 360 aa3.1□□□□□ -1.91
SUB1-202ENST00000502453 SLC25A33Q9BSK2 321 aa3.1□□□□□ -1.91
SUB1-202ENST00000502453 FAM159BA6NKW6 160 aa3.1□□□□□ -1.91
SUB1-202ENST00000502453 H3BSA7 217 aa3.1□□□□□ -1.91
SUB1-202ENST00000502453 OR2B3O76000 313 aa3.1□□□□□ -1.91
SUB1-202ENST00000502453 EDN1P05305 212 aa3.1□□□□□ -1.91
SUB1-202ENST00000502453 USF1P22415 310 aaPredicted RBP3.1□□□□□ -1.91
SUB1-202ENST00000502453 APLNRP35414 380 aa3.1□□□□□ -1.91
SUB1-202ENST00000502453 GDF5P43026 501 aa3.1□□□□□ -1.91
SUB1-202ENST00000502453 ATP4BP51164 291 aa3.1□□□□□ -1.91
SUB1-202ENST00000502453 ZNF133P52736 654 aaPredicted RBP3.1□□□□□ -1.91
SUB1-202ENST00000502453 OR12D2P58182 307 aa3.1□□□□□ -1.91
SUB1-202ENST00000502453 COPZ1P61923 177 aa3.1□□□□□ -1.91
SUB1-202ENST00000502453 TSNQ15631 228 aaKnown RBP3.1□□□□□ -1.91
SUB1-202ENST00000502453 P2RY8Q86VZ1 359 aa3.1□□□□□ -1.91
SUB1-202ENST00000502453 SKA3Q8IX90 412 aa3.1□□□□□ -1.91
SUB1-202ENST00000502453 GPD1LQ8N335 351 aa3.1□□□□□ -1.91
SUB1-202ENST00000502453 FTMTQ8N4E7 242 aa3.1□□□□□ -1.91
SUB1-202ENST00000502453 CBR4Q8N4T8 237 aa3.1□□□□□ -1.91
SUB1-202ENST00000502453 DCSTAMPQ9H295 470 aa3.1□□□□□ -1.91
SUB1-202ENST00000502453 ZNF224Q9NZL3 707 aa3.1□□□□□ -1.91
SUB1-202ENST00000502453 ZFP30Q9Y2G7 519 aa3.1□□□□□ -1.91
SUB1-202ENST00000502453 SLIT1O75093 1534 aa3.09□□□□□ -1.91
SUB1-202ENST00000502453 ZNF593O00488 134 aaPredicted RBP3.09□□□□□ -1.91
SUB1-202ENST00000502453 ERI3O43414 337 aaKnown RBP3.09□□□□□ -1.91
SUB1-202ENST00000502453 IFNA17P01571 189 aa3.09□□□□□ -1.91
SUB1-202ENST00000502453 CD8AP01732 235 aa3.09□□□□□ -1.91
SUB1-202ENST00000502453 REG1AP05451 166 aa3.09□□□□□ -1.91
SUB1-202ENST00000502453 CSF3P09919 207 aa3.09□□□□□ -1.91
SUB1-202ENST00000502453 HRH1P35367 487 aa3.09□□□□□ -1.91
SUB1-202ENST00000502453 TFPI2P48307 235 aa3.09□□□□□ -1.91
SUB1-202ENST00000502453 RND2P52198 227 aa3.09□□□□□ -1.91
SUB1-202ENST00000502453 SLC35A1P78382 337 aa3.09□□□□□ -1.91
SUB1-202ENST00000502453 WDR82Q6UXN9 313 aa3.09□□□□□ -1.91
SUB1-202ENST00000502453 ZNF614Q8N883 585 aa3.09□□□□□ -1.91
SUB1-202ENST00000502453 SAMD12Q8N8I0 201 aa3.09□□□□□ -1.91
SUB1-202ENST00000502453 OR4K17Q8NGC6 315 aa3.09□□□□□ -1.91
SUB1-202ENST00000502453 PAGE5Q96GU1 130 aa3.09□□□□□ -1.91
SUB1-202ENST00000502453 RASL11BQ9BPW5 248 aa3.09□□□□□ -1.91
SUB1-202ENST00000502453 COA1Q9GZY4 146 aa3.09□□□□□ -1.91
SUB1-202ENST00000502453 METTL1Q9UBP6 276 aaKnown RBP3.09□□□□□ -1.91
SUB1-202ENST00000502453 SSR3Q9UNL2 185 aa3.09□□□□□ -1.91
SUB1-202ENST00000502453 RBM7Q9Y580 266 aaKnown RBP3.09□□□□□ -1.91
SUB1-202ENST00000502453 OR51B2Q9Y5P1 312 aa3.09□□□□□ -1.91
SUB1-202ENST00000502453 MYH13Q9UKX3 1938 aa3.09□□□□□ -1.91
SUB1-202ENST00000502453 MEIKINA0A087WXM9 373 aa3.09□□□□□ -1.91
SUB1-202ENST00000502453 FAM189A1O60320 539 aa3.09□□□□□ -1.91
SUB1-202ENST00000502453 GGCTO75223 188 aaKnown RBP3.09□□□□□ -1.91
SUB1-202ENST00000502453 ZNF780AO75290 641 aaPredicted RBP3.09□□□□□ -1.91
SUB1-202ENST00000502453 NUDT14O95848 222 aa3.09□□□□□ -1.91
SUB1-202ENST00000502453 CRYGDP07320 174 aa3.09□□□□□ -1.91
SUB1-202ENST00000502453 FCGR3AP08637 254 aa3.09□□□□□ -1.91
SUB1-202ENST00000502453 HKR1P10072 659 aa3.09□□□□□ -1.91
SUB1-202ENST00000502453 DVL1P1P54792 670 aaPredicted RBP3.09□□□□□ -1.91
SUB1-202ENST00000502453 DLX1P56177 255 aa3.09□□□□□ -1.91
SUB1-202ENST00000502453 FAM78BQ5VT40 261 aa3.09□□□□□ -1.91
SUB1-202ENST00000502453 ZNF626Q68DY1 528 aa3.09□□□□□ -1.91
SUB1-202ENST00000502453 CHMP1BQ7LBR1 199 aa3.09□□□□□ -1.91
SUB1-202ENST00000502453 PTAR1Q7Z6K3 402 aaPredicted RBP3.09□□□□□ -1.91
SUB1-202ENST00000502453 CATSPER3Q86XQ3 398 aa3.09□□□□□ -1.91
SUB1-202ENST00000502453 PIANPQ8IYJ0 282 aa3.09□□□□□ -1.91
SUB1-202ENST00000502453 DAW1Q8N136 415 aa3.09□□□□□ -1.91
SUB1-202ENST00000502453 OR13C4Q8NGS5 318 aa3.09□□□□□ -1.91
SUB1-202ENST00000502453 OR4X1Q8NH49 305 aa3.09□□□□□ -1.91
SUB1-202ENST00000502453 MFSD8Q8NHS3 518 aa3.09□□□□□ -1.91
SUB1-202ENST00000502453 TMED6Q8WW62 240 aa3.09□□□□□ -1.91
SUB1-202ENST00000502453 NARS2Q96I59 477 aaKnown RBP3.09□□□□□ -1.91
SUB1-202ENST00000502453 ZNF778Q96MU6 729 aa3.09□□□□□ -1.91
SUB1-202ENST00000502453 OR52B2Q96RD2 323 aa3.09□□□□□ -1.91
SUB1-202ENST00000502453 PDCD10Q9BUL8 212 aa3.09□□□□□ -1.91
SUB1-202ENST00000502453 GNG8Q9UK08 70 aa3.09□□□□□ -1.91
SUB1-202ENST00000502453 PKIGQ9Y2B9 76 aa3.09□□□□□ -1.91
SUB1-202ENST00000502453 ZMYM2Q9UBW7 1377 aa3.09□□□□□ -1.91
SUB1-202ENST00000502453 IQGAP3Q86VI3 1631 aa3.09□□□□□ -1.91
SUB1-202ENST00000502453 FYCO1Q9BQS8 1478 aa3.09□□□□□ -1.92
SUB1-202ENST00000502453 CASKIN1Q8WXD9 1431 aa3.09□□□□□ -1.92
SUB1-202ENST00000502453 EXOC1LA0A1B0GW35 172 aa3.09□□□□□ -1.92
SUB1-202ENST00000502453 KRTAP23-1A1A580 65 aa3.09□□□□□ -1.92
SUB1-202ENST00000502453 M0R1B8 84 aa3.09□□□□□ -1.92
SUB1-202ENST00000502453 TNFSF15O95150 251 aa3.09□□□□□ -1.92
SUB1-202ENST00000502453 GADD45GO95257 159 aa3.09□□□□□ -1.92
SUB1-202ENST00000502453 SOX14O95416 240 aa3.09□□□□□ -1.92
SUB1-202ENST00000502453 IGKV5-2P06315 115 aa3.09□□□□□ -1.92
SUB1-202ENST00000502453 SNRPCP09234 159 aaKnown RBP3.09□□□□□ -1.92
SUB1-202ENST00000502453 LINC00271P0C7V0 271 aa3.09□□□□□ -1.92
SUB1-202ENST00000502453 PGA5P0DJD9 388 aa3.09□□□□□ -1.92
SUB1-202ENST00000502453 AK4P27144 223 aaPredicted RBP3.09□□□□□ -1.92
SUB1-202ENST00000502453 OR3A4PP47883 348 aa3.09□□□□□ -1.92
SUB1-202ENST00000502453 FABP6P51161 128 aa3.09□□□□□ -1.92
SUB1-202ENST00000502453 HERV-K104P61576 105 aa3.09□□□□□ -1.92
SUB1-202ENST00000502453 FAM53BQ14153 422 aa3.09□□□□□ -1.92
SUB1-202ENST00000502453 HSD17B12Q53GQ0 312 aa3.09□□□□□ -1.92
SUB1-202ENST00000502453 TMEM128Q5BJH2 165 aa3.09□□□□□ -1.92
SUB1-202ENST00000502453 OR10K2Q6IF99 312 aa3.09□□□□□ -1.92
SUB1-202ENST00000502453 ZADH2Q8N4Q0 377 aa3.09□□□□□ -1.92
SUB1-202ENST00000502453 FAM218AQ96MZ4 157 aa3.09□□□□□ -1.92
SUB1-202ENST00000502453 PRSS22Q9GZN4 317 aa3.09□□□□□ -1.92
SUB1-202ENST00000502453 SNX12Q9UMY4 172 aa3.09□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms