RNA–Protein interactions for RNA: ENST00000502422.5

MATR3-202, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 2,250 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-202ENST00000502422 RUNX2Q13950 521 aa3.91□□□□□ -1.78
MATR3-202ENST00000502422 HIST2H2BEQ16778 126 aa3.91□□□□□ -1.78
MATR3-202ENST00000502422 SCGB2B2Q4G0G5 96 aa3.91□□□□□ -1.78
MATR3-202ENST00000502422 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.91□□□□□ -1.78
MATR3-202ENST00000502422 TMEM69Q5SWH9 247 aa3.91□□□□□ -1.78
MATR3-202ENST00000502422 NIPAL3Q6P499 406 aa3.91□□□□□ -1.78
MATR3-202ENST00000502422 TRAT1Q6PIZ9 186 aa3.91□□□□□ -1.78
MATR3-202ENST00000502422 MEPCEQ7L2J0 689 aaKnown RBP3.91□□□□□ -1.78
MATR3-202ENST00000502422 OLIG3Q7RTU3 272 aa3.91□□□□□ -1.78
MATR3-202ENST00000502422 P4HA3Q7Z4N8 544 aa3.91□□□□□ -1.78
MATR3-202ENST00000502422 RANBP3LQ86VV4 465 aaPredicted RBP3.91□□□□□ -1.78
MATR3-202ENST00000502422 BPIFB2Q8N4F0 458 aa3.91□□□□□ -1.78
MATR3-202ENST00000502422 RFLNBQ8N5W9 214 aa3.91□□□□□ -1.78
MATR3-202ENST00000502422 OR10G3Q8NGC4 313 aa3.91□□□□□ -1.78
MATR3-202ENST00000502422 OR1J2Q8NGS2 313 aa3.91□□□□□ -1.78
MATR3-202ENST00000502422 LYPD6BQ8NI32 183 aa3.91□□□□□ -1.78
MATR3-202ENST00000502422 SYNPRQ8TBG9 265 aa3.91□□□□□ -1.78
MATR3-202ENST00000502422 SLC25A43Q8WUT9 341 aaPredicted RBP3.91□□□□□ -1.78
MATR3-202ENST00000502422 RAB8BQ92930 207 aa3.91□□□□□ -1.78
MATR3-202ENST00000502422 HIST1H2BHQ93079 126 aa3.91□□□□□ -1.78
MATR3-202ENST00000502422 NEIL2Q969S2 332 aa3.91□□□□□ -1.78
MATR3-202ENST00000502422 SAT2Q96F10 170 aaPredicted RBP3.91□□□□□ -1.78
MATR3-202ENST00000502422 BSCL2Q96G97 398 aaPredicted RBP3.91□□□□□ -1.78
MATR3-202ENST00000502422 WDYHV1Q96HA8 205 aa3.91□□□□□ -1.78
MATR3-202ENST00000502422 SMIM10Q96HG1 83 aa3.91□□□□□ -1.78
MATR3-202ENST00000502422 SEC22AQ96IW7 307 aa3.91□□□□□ -1.78
MATR3-202ENST00000502422 GNRHR2Q96P88 292 aa3.91□□□□□ -1.78
MATR3-202ENST00000502422 GAL3ST4Q96RP7 486 aa3.91□□□□□ -1.78
MATR3-202ENST00000502422 HIST1H2BNQ99877 126 aa3.91□□□□□ -1.78
MATR3-202ENST00000502422 HIST1H2BMQ99879 126 aa3.91□□□□□ -1.78
MATR3-202ENST00000502422 MICU1Q9BPX6 476 aa3.91□□□□□ -1.78
MATR3-202ENST00000502422 C20orf24Q9BUV8 137 aa3.91□□□□□ -1.78
MATR3-202ENST00000502422 RNF126Q9BV68 326 aa3.91□□□□□ -1.78
MATR3-202ENST00000502422 FNDC11Q9BVV2 318 aa3.91□□□□□ -1.78
MATR3-202ENST00000502422 ACTRT3Q9BYD9 372 aa3.91□□□□□ -1.78
MATR3-202ENST00000502422 SEPSECSQ9HD40 501 aaKnown RBP3.91□□□□□ -1.78
MATR3-202ENST00000502422 SH2D2AQ9NP31 389 aa3.91□□□□□ -1.78
MATR3-202ENST00000502422 GAB2Q9UQC2 676 aa3.91□□□□□ -1.78
MATR3-202ENST00000502422 LAMP3Q9UQV4 416 aa3.91□□□□□ -1.78
MATR3-202ENST00000502422 SPACA6W5XKT8 324 aa3.91□□□□□ -1.78
MATR3-202ENST00000502422 USF3Q68DE3 2245 aa3.91□□□□□ -1.78
MATR3-202ENST00000502422 ANK3Q12955 4377 aaKnown RBP3.9□□□□□ -1.78
MATR3-202ENST00000502422 LRRC3CA6NJW4 275 aa3.9□□□□□ -1.79
MATR3-202ENST00000502422 H0YIZ8 118 aa3.9□□□□□ -1.79
MATR3-202ENST00000502422 J3QLW9 94 aa3.9□□□□□ -1.79
MATR3-202ENST00000502422 HMGN4O00479 90 aa3.9□□□□□ -1.79
MATR3-202ENST00000502422 PHOX2AO14813 284 aa3.9□□□□□ -1.79
MATR3-202ENST00000502422 AGPAT2O15120 278 aa3.9□□□□□ -1.79
MATR3-202ENST00000502422 SMAD9O15198 467 aaKnown RBP3.9□□□□□ -1.79
MATR3-202ENST00000502422 ADAM20O43506 726 aa3.9□□□□□ -1.79
MATR3-202ENST00000502422 TGFB1P01137 390 aa3.9□□□□□ -1.79
MATR3-202ENST00000502422 CHRM4P08173 479 aa3.9□□□□□ -1.79
MATR3-202ENST00000502422 ZNF19P17023 458 aa3.9□□□□□ -1.79
MATR3-202ENST00000502422 SOAT1P35610 550 aa3.9□□□□□ -1.79
MATR3-202ENST00000502422 CAMLGP49069 296 aa3.9□□□□□ -1.79
MATR3-202ENST00000502422 PRKXP51817 358 aa3.9□□□□□ -1.79
MATR3-202ENST00000502422 GFRA1P56159 465 aa3.9□□□□□ -1.79
MATR3-202ENST00000502422 FXYD6P3P58550 94 aa3.9□□□□□ -1.79
MATR3-202ENST00000502422 TAS2R43P59537 309 aa3.9□□□□□ -1.79
MATR3-202ENST00000502422 TRA2BP62995 288 aaKnown RBP3.9□□□□□ -1.79
MATR3-202ENST00000502422 IRF8Q02556 426 aa3.9□□□□□ -1.79
MATR3-202ENST00000502422 PCGF3Q3KNV8 242 aa3.9□□□□□ -1.79
MATR3-202ENST00000502422 TMEM35AQ53FP2 167 aa3.9□□□□□ -1.79
MATR3-202ENST00000502422 FAM71E1Q6IPT2 247 aa3.9□□□□□ -1.79
MATR3-202ENST00000502422 LPCAT3Q6P1A2 487 aa3.9□□□□□ -1.79
MATR3-202ENST00000502422 TMPPEQ6ZT21 453 aa3.9□□□□□ -1.79
MATR3-202ENST00000502422 ZNF550Q7Z398 422 aa3.9□□□□□ -1.79
MATR3-202ENST00000502422 KLHDC8AQ8IYD2 350 aa3.9□□□□□ -1.79
MATR3-202ENST00000502422 CNEP1R1Q8N9A8 125 aa3.9□□□□□ -1.79
MATR3-202ENST00000502422 TMEM52Q8NDY8 209 aa3.9□□□□□ -1.79
MATR3-202ENST00000502422 OR10H4Q8NGA5 316 aa3.9□□□□□ -1.79
MATR3-202ENST00000502422 MUCL1Q96DR8 90 aa3.9□□□□□ -1.79
MATR3-202ENST00000502422 NEURL3Q96EH8 262 aa3.9□□□□□ -1.79
MATR3-202ENST00000502422 C1orf159Q96HA4 380 aa3.9□□□□□ -1.79
MATR3-202ENST00000502422 PRRC1Q96M27 445 aa3.9□□□□□ -1.79
MATR3-202ENST00000502422 DGAT2Q96PD7 388 aa3.9□□□□□ -1.79
MATR3-202ENST00000502422 OR14A2Q96R54 314 aa3.9□□□□□ -1.79
MATR3-202ENST00000502422 TEX12Q9BXU0 123 aa3.9□□□□□ -1.79
MATR3-202ENST00000502422 TRIM2Q9C040 744 aa3.9□□□□□ -1.79
MATR3-202ENST00000502422 KRCC1Q9NPI7 259 aaPredicted RBP3.9□□□□□ -1.79
MATR3-202ENST00000502422 UBQLN4Q9NRR5 601 aa3.9□□□□□ -1.79
MATR3-202ENST00000502422 ZNF701Q9NV72 531 aaPredicted RBP3.9□□□□□ -1.79
MATR3-202ENST00000502422 STEAP1Q9UHE8 339 aa3.9□□□□□ -1.79
MATR3-202ENST00000502422 DAPP1Q9UN19 280 aa3.9□□□□□ -1.79
MATR3-202ENST00000502422 CHCHD2Q9Y6H1 151 aaPredicted RBP3.9□□□□□ -1.79
MATR3-202ENST00000502422 MED12LQ86YW9 2145 aa3.9□□□□□ -1.79
MATR3-202ENST00000502422 TRAV34A0A0B4J273 112 aa3.9□□□□□ -1.79
MATR3-202ENST00000502422 A0A0B4J2A0 478 aa3.9□□□□□ -1.79
MATR3-202ENST00000502422 GNG14A0A1W2PPG7 69 aa3.9□□□□□ -1.79
MATR3-202ENST00000502422 MSGN1A6NI15 193 aa3.9□□□□□ -1.79
MATR3-202ENST00000502422 C16orf97H3BN30 126 aa3.9□□□□□ -1.79
MATR3-202ENST00000502422 LDLRAD4O15165 306 aa3.9□□□□□ -1.79
MATR3-202ENST00000502422 GMFGO60234 142 aa3.9□□□□□ -1.79
MATR3-202ENST00000502422 ADAP1O75689 374 aa3.9□□□□□ -1.79
MATR3-202ENST00000502422 ARL6IP5O75915 188 aa3.9□□□□□ -1.79
MATR3-202ENST00000502422 THY1P04216 161 aa3.9□□□□□ -1.79
MATR3-202ENST00000502422 CD3DP04234 171 aa3.9□□□□□ -1.79
MATR3-202ENST00000502422 CXCL1P09341 107 aa3.9□□□□□ -1.79
MATR3-202ENST00000502422 OR8U9P0C7N5 309 aa3.9□□□□□ -1.79
MATR3-202ENST00000502422 GZMBP10144 247 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms