RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 Q9H521 79 aa9.29□□□□□ -0.92
ERCC8-208ENST00000497892 RBFOX1Q9NWB1 397 aaKnown RBP9.29□□□□□ -0.92
ERCC8-208ENST00000497892 BLOC1S6Q9UL45 172 aa9.29□□□□□ -0.92
ERCC8-208ENST00000497892 TRBV5-7A0A0A0MS05 114 aa9.28□□□□□ -0.92
ERCC8-208ENST00000497892 IGKV1-12A0A0C4DH73 117 aa9.28□□□□□ -0.92
ERCC8-208ENST00000497892 ZNF879B4DU55 563 aa9.28□□□□□ -0.92
ERCC8-208ENST00000497892 DENRO43583 198 aaKnown RBP9.28□□□□□ -0.92
ERCC8-208ENST00000497892 ANGPTL7O43827 346 aa9.28□□□□□ -0.92
ERCC8-208ENST00000497892 KDM4BO94953 1096 aa9.28□□□□□ -0.92
ERCC8-208ENST00000497892 IGKV1D-12P01611 117 aa9.28□□□□□ -0.92
ERCC8-208ENST00000497892 IGFBP3P17936 291 aaPredicted RBP9.28□□□□□ -0.92
ERCC8-208ENST00000497892 FSTP19883 344 aa9.28□□□□□ -0.92
ERCC8-208ENST00000497892 BCL3P20749 454 aa9.28□□□□□ -0.92
ERCC8-208ENST00000497892 PRDX2P32119 198 aa9.28□□□□□ -0.92
ERCC8-208ENST00000497892 NPBWR2P48146 333 aa9.28□□□□□ -0.92
ERCC8-208ENST00000497892 ZP1P60852 638 aa9.28□□□□□ -0.92
ERCC8-208ENST00000497892 FGF12P61328 243 aa9.28□□□□□ -0.92
ERCC8-208ENST00000497892 PPP3R1P63098 170 aa9.28□□□□□ -0.92
ERCC8-208ENST00000497892 MED22Q15528 200 aa9.28□□□□□ -0.92
ERCC8-208ENST00000497892 SPIN3Q5JUX0 258 aa9.28□□□□□ -0.92
ERCC8-208ENST00000497892 ZSCAN4Q8NAM6 433 aaPredicted RBP9.28□□□□□ -0.92
ERCC8-208ENST00000497892 EMG1Q92979 244 aaKnown RBP9.28□□□□□ -0.92
ERCC8-208ENST00000497892 OR14A2Q96R54 314 aa9.28□□□□□ -0.92
ERCC8-208ENST00000497892 RHOFQ9HBH0 211 aa9.28□□□□□ -0.92
ERCC8-208ENST00000497892 OR14J1Q9UGF5 321 aa9.28□□□□□ -0.92
ERCC8-208ENST00000497892 COL6A5A8TX70 2615 aa9.28□□□□□ -0.92
ERCC8-208ENST00000497892 TRBV23-1A0A0A0MS06 115 aa9.27□□□□□ -0.93
ERCC8-208ENST00000497892 TRAV40A0A0B4J280 105 aa9.27□□□□□ -0.93
ERCC8-208ENST00000497892 GABRPO00591 440 aa9.27□□□□□ -0.93
ERCC8-208ENST00000497892 MAGEB3O15480 346 aa9.27□□□□□ -0.93
ERCC8-208ENST00000497892 ZNF737O75373 536 aa9.27□□□□□ -0.93
ERCC8-208ENST00000497892 GPX5O75715 221 aa9.27□□□□□ -0.93
ERCC8-208ENST00000497892 INMTO95050 263 aa9.27□□□□□ -0.93
ERCC8-208ENST00000497892 ALDOBP05062 364 aa9.27□□□□□ -0.93
ERCC8-208ENST00000497892 SFTPBP07988 381 aa9.27□□□□□ -0.93
ERCC8-208ENST00000497892 MMP9P14780 707 aa9.27□□□□□ -0.93
ERCC8-208ENST00000497892 NDUFB7P17568 137 aa9.27□□□□□ -0.93
ERCC8-208ENST00000497892 METTL11BQ5VVY1 283 aa9.27□□□□□ -0.93
ERCC8-208ENST00000497892 FIP1L1Q6UN15 594 aaKnown RBP9.27□□□□□ -0.93
ERCC8-208ENST00000497892 FAM58AQ8N1B3 248 aa9.27□□□□□ -0.93
ERCC8-208ENST00000497892 KIR3DL3Q8N743 410 aa9.27□□□□□ -0.93
ERCC8-208ENST00000497892 OR52N4Q8NGI2 321 aa9.27□□□□□ -0.93
ERCC8-208ENST00000497892 H1FXQ92522 213 aaKnown RBP9.27□□□□□ -0.93
ERCC8-208ENST00000497892 THRSPQ92748 146 aa9.27□□□□□ -0.93
ERCC8-208ENST00000497892 ORAI1Q96D31 301 aa9.27□□□□□ -0.93
ERCC8-208ENST00000497892 WDFY2Q96P53 400 aa9.27□□□□□ -0.93
ERCC8-208ENST00000497892 DERL3Q96Q80 235 aa9.27□□□□□ -0.93
ERCC8-208ENST00000497892 TBX15Q96SF7 602 aa9.27□□□□□ -0.93
ERCC8-208ENST00000497892 FAM234AQ9H0X4 552 aa9.27□□□□□ -0.93
ERCC8-208ENST00000497892 SIRPDQ9H106 197 aa9.27□□□□□ -0.93
ERCC8-208ENST00000497892 SEBOXQ9HB31 216 aaPredicted RBP9.27□□□□□ -0.93
ERCC8-208ENST00000497892 ELL3Q9HB65 397 aaPredicted RBP9.27□□□□□ -0.93
ERCC8-208ENST00000497892 HMG20AQ9NP66 347 aa9.27□□□□□ -0.93
ERCC8-208ENST00000497892 TMEM138Q9NPI0 162 aa9.27□□□□□ -0.93
ERCC8-208ENST00000497892 IL36RNQ9UBH0 155 aa9.27□□□□□ -0.93
ERCC8-208ENST00000497892 CKLFQ9UBR5 152 aa9.27□□□□□ -0.93
ERCC8-208ENST00000497892 NUP50Q9UKX7 468 aa9.27□□□□□ -0.93
ERCC8-208ENST00000497892 KPTNQ9Y664 436 aa9.27□□□□□ -0.93
ERCC8-208ENST00000497892 DSCAML1Q8TD84 2053 aa9.27□□□□□ -0.93
ERCC8-208ENST00000497892 TRAV8-7A0A075B6U6 113 aa9.26□□□□□ -0.93
ERCC8-208ENST00000497892 MAGEA13PA6NCF6 341 aa9.26□□□□□ -0.93
ERCC8-208ENST00000497892 TOX4O94842 621 aa9.26□□□□□ -0.93
ERCC8-208ENST00000497892 HAND1O96004 215 aa9.26□□□□□ -0.93
ERCC8-208ENST00000497892 TK1P04183 234 aa9.26□□□□□ -0.93
ERCC8-208ENST00000497892 CHRM2P08172 466 aa9.26□□□□□ -0.93
ERCC8-208ENST00000497892 IGHV4-38-2P0DP08 117 aa9.26□□□□□ -0.93
ERCC8-208ENST00000497892 TMEM225BP0DP42 221 aa9.26□□□□□ -0.93
ERCC8-208ENST00000497892 PRKACAP17612 351 aa9.26□□□□□ -0.93
ERCC8-208ENST00000497892 EEF1B2P24534 225 aaKnown RBP9.26□□□□□ -0.93
ERCC8-208ENST00000497892 MAPK3P27361 379 aaPredicted RBP9.26□□□□□ -0.93
ERCC8-208ENST00000497892 BDKRB2P30411 391 aa9.26□□□□□ -0.93
ERCC8-208ENST00000497892 CAPZA1P52907 286 aa9.26□□□□□ -0.93
ERCC8-208ENST00000497892 GABARAPL2P60520 117 aa9.26□□□□□ -0.93
ERCC8-208ENST00000497892 COL10A1Q03692 680 aa9.26□□□□□ -0.93
ERCC8-208ENST00000497892 GPR50Q13585 617 aa9.26□□□□□ -0.93
ERCC8-208ENST00000497892 ZNF146Q15072 292 aa9.26□□□□□ -0.93
ERCC8-208ENST00000497892 TBCEQ15813 527 aaPredicted RBP9.26□□□□□ -0.93
ERCC8-208ENST00000497892 DDI2Q5TDH0 399 aa9.26□□□□□ -0.93
ERCC8-208ENST00000497892 MS4A15Q8N5U1 240 aa9.26□□□□□ -0.93
ERCC8-208ENST00000497892 PXT1Q8NFP0 134 aa9.26□□□□□ -0.93
ERCC8-208ENST00000497892 GPER1Q99527 375 aa9.26□□□□□ -0.93
ERCC8-208ENST00000497892 PCGF1Q9BSM1 259 aa9.26□□□□□ -0.93
ERCC8-208ENST00000497892 CCDC90BQ9GZT6 254 aa9.26□□□□□ -0.93
ERCC8-208ENST00000497892 CNTD2Q9H8S5 307 aa9.26□□□□□ -0.93
ERCC8-208ENST00000497892 FBN1P35555 2871 aaKnown RBP9.25□□□□□ -0.93
ERCC8-208ENST00000497892 A0A1W2PQ09 198 aa9.25□□□□□ -0.93
ERCC8-208ENST00000497892 K7N7A8 449 aa9.25□□□□□ -0.93
ERCC8-208ENST00000497892 PIN1P1O15428 100 aa9.25□□□□□ -0.93
ERCC8-208ENST00000497892 TCF21O43680 179 aa9.25□□□□□ -0.93
ERCC8-208ENST00000497892 ZNF93P35789 620 aaPredicted RBP9.25□□□□□ -0.93
ERCC8-208ENST00000497892 MAP2K4P45985 399 aa9.25□□□□□ -0.93
ERCC8-208ENST00000497892 OR3A4PP47883 348 aa9.25□□□□□ -0.93
ERCC8-208ENST00000497892 ARF6P62330 175 aa9.25□□□□□ -0.93
ERCC8-208ENST00000497892 MLLT11Q13015 90 aaPredicted RBP9.25□□□□□ -0.93
ERCC8-208ENST00000497892 TPBGQ13641 420 aa9.25□□□□□ -0.93
ERCC8-208ENST00000497892 ELP2Q6IA86 826 aa9.25□□□□□ -0.93
ERCC8-208ENST00000497892 ASCL4Q6XD76 172 aa9.25□□□□□ -0.93
ERCC8-208ENST00000497892 C9orf139Q6ZV77 190 aa9.25□□□□□ -0.93
ERCC8-208ENST00000497892 CMTM4Q8IZR5 234 aa9.25□□□□□ -0.93
ERCC8-208ENST00000497892 OR8H2Q8N162 312 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms